Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0593 | ATGGGAATCTCTAACATTACAGGTGAAATTCATCATCCAAACTTGTCTTCAGGCAACAATGTGGAAGATCAATTAGAAGAAGTTGAACAAAACAATAATCAACATCAACTTCTTAATCACTTCCTCTATGGCTCTCCCAATGGAGATCAAACCAACTCCCATGGCTCATCTAATTCACTTGATCCCCCCCAACAAAGAGTTAAGAAGAAGCGAAATCTTCCCGGCACTCCAGATCCAAATGCTGAAGTTATTGCTCTATCACCAACAACCCTAATGGCTAGAAATAGGTTTGTGTGTGAGATTTGCAACAAGGGGTTTCAAAGAGATCAAAACCTTCAATTGCATAGGAGAGGCCACAACCTGCCATGGAAACTCCGGCAAAGAACCGGCACCGAAGTGAAGAAAAGGGTCTATGTGTGCCCCGAACTGACATGCGTTCATCACAACCCGGCCCGAGCTCTCGGCGATCTTACCGGAATTAAGAAGCATTTTAGTAGAAAGCATGGGGAGAAGAAATGGAAGTGTGAGAAATGCTCCAAGAAATATGCAGTTCAATCTGATTTGAAAGCTCATCAAAAGACTTGTGGCACTAGGGAATACAAATGTGATTGTGGAACTCTATTTTCCAGAAGGGACAGCTTCATCACCCACAGAGCCTTTTGCAATGCATTAACAGAAGAAAACAACAAACTAAAGCAAGGAATTCTCAATAATAATAATAATAATAATGATAACATAGAACCAATCTCAATTATCTCCACTCCAAAACTCCCTCCTTTTGGCACATCAATCATCCCTGAATTCAACCCTTATGATCAAAAAAACCCTTTTAAATCCCTCCCCCAAGAACTCAGCAACTCGGCCCCGGCCAACGGTGCACCTGGAGGCTTGTTCATGGTCGGACCCCGAAGCAGCAACAACTCTTCTTCTTTTTCAAGCCTTAAGCTCGGCTCCACCACCTCTTCGCGCTTTAGTTGCCTTTATGATAGTAAAAATGGTTGCCTTCAGGATTCTGGGTCGGCAACAGCAGCATTGGTAACGTCGGCCACCGCCTTGTTACAGAAAGCTGCGCAAATAGGAGCAACGACAAGCTCCGTTGGTGTTCTGAAGTCACCATTGTTGGAAATACCTCATTCTGTTGATCAAGCAGACATGGTAGGGATGAATATGGGAATGTACGGACACATGGTGATGATGAAAGAACAAGAGAATTGTAGTAGCAAAAACTCAAGTTTTGTCGTCCACGAAAAGGGCCAGTGGCGACCAATGTCGAGATTTTCCGGTGGCAATAACGGCGGAGAAGAGAGTCAGATGATGACTTTGGATTTGTTGGGAGAAAGAGGGTGGAGGCTGAGGCAATTGCAGGGAGATGAAAGCCACCATCACCAGCAGGAGATGATGCCAATTATGAAGCATTTTGAGATGCACAACTTTCATGGGGATTCAAATGTTGACAAATCTATATTTGAGTATTGA | 1476 | 43.77 | MGISNITGEIHHPNLSSGNNVEDQLEEVEQNNNQHQLLNHFLYGSPNGDQTNSHGSSNSLDPPQQRVKKKRNLPGTPDPNAEVIALSPTTLMARNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTGTEVKKRVYVCPELTCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHQKTCGTREYKCDCGTLFSRRDSFITHRAFCNALTEENNKLKQGILNNNNNNNDNIEPISIISTPKLPPFGTSIIPEFNPYDQKNPFKSLPQELSNSAPANGAPGGLFMVGPRSSNNSSSFSSLKLGSTTSSRFSCLYDSKNGCLQDSGSATAALVTSATALLQKAAQIGATTSSVGVLKSPLLEIPHSVDQADMVGMNMGMYGHMVMMKEQENCSSKNSSFVVHEKGQWRPMSRFSGGNNGGEESQMMTLDLLGERGWRLRQLQGDESHHHQQEMMPIMKHFEMHNFHGDSNVDKSIFEY | 491 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5162250 | 5165447 | + | CePI673135_09g005930.1 | Cec09g0593 | 211103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0593 | 491 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 97 | 119 | IPR013087 | - | |
Cec09g0593 | 491 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 54 | 459 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec09g0593 | 491 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 99 | 119 | IPR013087 | - | |
Cec09g0593 | 491 | Pfam | Zinc finger, C2H2 type | 97 | 119 | IPR013087 | - | |
Cec09g0593 | 491 | Gene3D | Classic Zinc Finger | 75 | 142 | - | - | |
Cec09g0593 | 491 | FunFam | protein indeterminate-domain 12-like | 76 | 144 | - | - | |
Cec09g0593 | 491 | Coils | Coil | 18 | 38 | - | - | |
Cec09g0593 | 491 | SMART | c2h2final6 | 97 | 119 | IPR013087 | - | |
Cec09g0593 | 491 | SMART | c2h2final6 | 138 | 168 | IPR013087 | - | |
Cec09g0593 | 491 | SMART | c2h2final6 | 173 | 193 | IPR013087 | - | |
Cec09g0593 | 491 | MobiDBLite | consensus disorder prediction | 40 | 82 | - | - | |
Cec09g0593 | 491 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 172 | 196 | - | - | |
Cec09g0593 | 491 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 151 | 230 | - | - | |
Cec09g0593 | 491 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 173 | 201 | IPR013087 | - | |
Cec09g0593 | 491 | MobiDBLite | consensus disorder prediction | 40 | 63 | - | - | |
Cec09g0593 | 491 | SUPERFAMILY | beta-beta-alpha zinc fingers | 96 | 194 | IPR036236 | - | |
Cec09g0593 | 491 | Gene3D | Classic Zinc Finger | 152 | 231 | - | - | |
Cec09g0593 | 491 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 134 | 168 | - | - | |
Cec09g0593 | 491 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 199 | 239 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1765 | Cec-Chr3:35936537 | Cec09g0593 | Cec-Chr9:5162250 | 2.10E-91 | dispersed | |
Cec09g0593 | Cec-Chr9:5162250 | Cec09g0710 | Cec-Chr9:6352375 | 6.40E-81 | dispersed | |
Cec09g0593 | Cec-Chr9:5162250 | Cec04g1030 | Cec-Chr4:29882504 | 2.60E-82 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30191 | None | None | None | None | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0593 | - | - | - | 0.0 |