Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g0616 | ATGGTGGCTGGTGATGACGAACATTTCAGGCATGAGCCGCAACAATATGATTTGCGCTTCCGTGTAGAACAGATTTCTACATGGGTTGTTGTTGCGATGAAGAATATATTTCTTAGATTACCATTTGATTCCTCCCTTTTGGACTCCTCTTCTCTCGATTCTTTTGGCGGTAGAGATAAGTATTCGAATCATTTCATGGAATCGTATTTTGGAAACACTGTGATGAAGTTGGCTTTGAAAGCAGACCCCGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATTGGGCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTCACTGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTATTAACCACCAAAGGCACAAACTCACGTATCCTAGTGTTTAGTGAAGAACTTTTCTTCACTTATGTTCTTCCACCAATTATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTATAATGATCATGTTGTTTGGGGCAGTTGGTACTGTGATCTCTTTTTTCATCATATCACTAGGTTCACTCTATTTATTCAAGAAATTTGGTATTGGCTTCTTAGACGTGGGTGATTATTTTGCGCTCGGAGCAATCTTATCAGCGACAGATAGTGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTTGTTAATGATGCTACTTCTGTCGTATTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATGACCTCATCCAACGGCATTCAGCTTCTTGGAAACTTTTTCTATTTATTTTTTACGAGCACCTTGCTGGGAGCGATTGTTGGGTTGTCCAGTGCATACATCATAAAGAAGCTGTACTTTGCCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATACATGACTGCTGAATTGTGCAATCTAAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCACGAGTGACCACCAAGCATACTTTTGCAACATTCTCGTTTGTTTCAGAGATTTTCATCTTTCTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTCAGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTTCCACTTTCCTTTATATCGAACTTGACTAGAAAATCTCAGACTGACAAAATTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGGGGTGCTGTATCTGTGGCCCTTGCTTATAATCAGTTTACGAGGTCAGGGCACACGCAACTACAAGGGAATGCGATCATGATTACTAGCACAATCACAATTGTTCTCATCACTAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCATGATAAACAAATAGACGGCATAATTGTAACAGATTCTCCACTTAAGTCGCTGAATGACCCTCTTCTGCCTGGTGTTGAAGATAATGAATCCGATGCCGGAGGATCGAACATTCCCCGTCCTACCAGTTTACGTATGATGTTGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGGATGTTCGATGATCGATATATGCGTCCTGTTTTTGGTGGAAGAGGTTTTGTACCTTTCATCCCCGGTTCACCAACTGAAAAACAGGAAATAGAAAAAGGAAGCTATAGGATAAACACAGTTAGAGCATCTTTGTTGGCGCCAAAGAAGAACTCCGCAAAGAACGAAGAACTCCGTCTTTGTAATGGAATTGCAAAGAGAGATAATTGTATTCCGTCGGGGGAGAGGAAATCTTCGCTACATTACGCCATGGATTTCCTATTTCATCAGGATACTTCCGCCAAGAACTCCGTCAACATTTGGATTCCTTCCACTGCAAGGTTTCAAATCATATCCTTCGATTCTCTATATATGCATACGATTCCAGCTCTTGGCTTCATGGATCCAATGGCTTTTCTGTCGCAATTGGGGCTGAAAGCAGACCGGGAAGCGGCGCACTTCACGTTTTTTGCGGTGCTACTCTTTGTCTGTTATCTAATTGTTCGTCTTTTTGAGAAGAAACGTTGGCTGAATGAGTCAATTACTTCCCTAGCTATTGGAATTTTCACTGGAATTATCGTTCTCCTAACGACTAGAGGAAAAAGTTCTCACATCCTAGAATTCAATGAACAGCTTTTCTTCATTTACCTTCTTCCACCCATAATATTTAATGCTGGGTTTCAGGTGAAGAAGAAACAGTTCTTTTGCAACTTTCTGGCAATCTTATTGTTTGGTGCTTTTGGAAGTGTGATATCATTCTTCATCATATCACTAGCACTTGGAGCAATCTTAACAGCGACAGATAGTGTTTGCACCTTGCAAGTTCTTAAACAAGATGAGACACCTTTACTTTATAGTCTGGTCTTTGGGGAAGGTGTGGCCAATGATGCTACCTCAGTGGTACTCTTCAATGCAATCAAGAAATTTGACCTCTCTCACATCACTTCAACAAATGCCATTCGGTTAGCTGGAAGTTTCTTAGGGTTGTTCTTGGGAAGCACACTACTGGGAATTGCAGTTGGGCTGCTATGTGCATTTATCATAAAGAAGCTATCCTTAGGCAGGCACCCTACAGATTATGAAGTTGTTCCGATGATTTTGATGGCCTACCTTTCATATATGATTGCTGAATTGTTGCTTCTTAGTGGTATTCTTAGCGTGTTCTTTTGTGGGATTGTCATGTCTCACTACACATCTTGGAATAATAGGACTGACAGTACCGATAATGGGATTGGCAGTTCCAGACTAATACCACGCCATGCTTTTGCGACATTATCTTTCGTAGCAGAGATCTTCATCTTCCTTTATGTTGGTATGGATGCATTGGATATTGAGAAGTGGAATGTTGTTAGAGAAAGGCCTGGGAAATCAGTTGGAGCAAGTCTTATACTGCTAGGCCTTGTTCTTGTTGGAAGAGCAGCTTTTGTATTCCCACTCTCTTTCGTTTCCAACTTGACCAGAAAGCACAAAAAAGACCATATTGGGTTTAAACAACAGTTTACGATTTGGTGGGCTGGACTCATGAGAGGTGCTGTATCAGTGGCACTTGCCTATCATCAGTTTGCAAGGTCAGAAGAAAAGGAACAAGGGGCTTCGATAATGATAACTAGCACCATCATAATTGTTCTCTTCACAAACGTGGTGTTTGGATTGTTGACCAAGTCCATAGTAAGACGAATGATTCCTCGAATTAACCACGAGTCAAGACATTTATATTTTCCCTTACTTCAAGAATTGAGTGATTCGTTGCTTGATGAGAATGATATTGAATCCGACACCCACGAACTTAACCAACTTCCTCCAGACAGTTTCATGTCGTTTATGAAATCTCCAACTCAATGTCTCCATTATTATTGGTACAAGTTTGATGATTGCTTCATGCGTCCTGTTTTTGGAGGGAGTGAATCTTCATTGGAGCATCTCACTCCCTCAGCTTCTCCCTGA | 3630 | 40.99 | MVAGDDEHFRHEPQQYDLRFRVEQISTWVVVAMKNIFLRLPFDSSLLDSSSLDSFGGRDKYSNHFMESYFGNTVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFTGTLILLTTKGTNSRILVFSEELFFTYVLPPIIFNAGFQVKKKQFFRNFIMIMLFGAVGTVISFFIISLGSLYLFKKFGIGFLDVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVFFKAIQRFDLSHMTSSNGIQLLGNFFYLFFTSTLLGAIVGLSSAYIIKKLYFARHSTDREVALMILMPYLSYMTAELCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLSLVLVARAAFVFPLSFISNLTRKSQTDKIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLITNVVFGLLTKPIVRYMLSLHDKQIDGIIVTDSPLKSLNDPLLPGVEDNESDAGGSNIPRPTSLRMMLTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKQEIEKGSYRINTVRASLLAPKKNSAKNEELRLCNGIAKRDNCIPSGERKSSLHYAMDFLFHQDTSAKNSVNIWIPSTARFQIISFDSLYMHTIPALGFMDPMAFLSQLGLKADREAAHFTFFAVLLFVCYLIVRLFEKKRWLNESITSLAIGIFTGIIVLLTTRGKSSHILEFNEQLFFIYLLPPIIFNAGFQVKKKQFFCNFLAILLFGAFGSVISFFIISLALGAILTATDSVCTLQVLKQDETPLLYSLVFGEGVANDATSVVLFNAIKKFDLSHITSTNAIRLAGSFLGLFLGSTLLGIAVGLLCAFIIKKLSLGRHPTDYEVVPMILMAYLSYMIAELLLLSGILSVFFCGIVMSHYTSWNNRTDSTDNGIGSSRLIPRHAFATLSFVAEIFIFLYVGMDALDIEKWNVVRERPGKSVGASLILLGLVLVGRAAFVFPLSFVSNLTRKHKKDHIGFKQQFTIWWAGLMRGAVSVALAYHQFARSEEKEQGASIMITSTIIIVLFTNVVFGLLTKSIVRRMIPRINHESRHLYFPLLQELSDSLLDENDIESDTHELNQLPPDSFMSFMKSPTQCLHYYWYKFDDCFMRPVFGGSESSLEHLTPSASP | 1209 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 5359074 | 5378233 | + | CePI673135_09g006160.1 | Cec09g0616 | 211126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g0616 | 1209 | Gene3D | - | 208 | 259 | - | - | |
| Cec09g0616 | 1209 | Gene3D | - | 818 | 867 | - | - | |
| Cec09g0616 | 1209 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 82 | 599 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Cec09g0616 | 1209 | PRINTS | Na+/H+ exchanger signature | 146 | 157 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec09g0616 | 1209 | PRINTS | Na+/H+ exchanger signature | 175 | 183 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec09g0616 | 1209 | PRINTS | Na+/H+ exchanger signature | 215 | 225 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec09g0616 | 1209 | PRINTS | Na+/H+ exchanger signature | 160 | 174 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec09g0616 | 1209 | Pfam | Sodium/hydrogen exchanger family | 722 | 1120 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Cec09g0616 | 1209 | Pfam | Sodium/hydrogen exchanger family | 97 | 505 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Cec09g0616 | 1209 | NCBIfam | sodium/hydrogen exchanger 3 | 87 | 538 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g1708 | Cec-Chr3:35354599 | Cec09g0616 | Cec-Chr9:5359074 | 4.80E-199 | dispersed | |
| Cec09g0616 | Cec-Chr9:5359074 | Cec09g2194 | Cec-Chr9:38864805 | 1.60E-157 | dispersed | |
| Cec06g0546 | Cec-Chr6:6074491 | Cec09g0616 | Cec-Chr9:5359074 | 8.70E-196 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g0616 | - | - | - | 0.0 |