Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0708 ATGATGAAATTGGAGTCAGGGGCCGAAACTTTCATTCCTCTCTCTCACTCTCTCTCTGCTTTCTCTCTCTTCCAACTTGCCCAAGAAACTTCTCTGCTCCAAGAGATGAATCCTCTGTTTCCAGTTAAGGAAGAGTTTCCGGGATCCTGTTCGCCGGATGTCGACGGAGAGCAATCGGCGATTATGGCTCCTCCCCTGCCGATGGAGGGTCTTCACGACGCCGGTCCACCGCCGTTTTTGACTAAAACGTTTGAAATCGTTGATGATTTTAATACCGATCATGTAATTTCTTGGAGCTTTGCTGGAACTAGTTTCATCGTATGGGATCCTCATTGCTTTTCCACTCAATTGCTTCCAAGATTTTTTAAGCATAATAACTTTTCCAGCTTCGTTCGTCAACTTAATACTTACGGTTTTAGAAAGATAGATCCAGATAGATGGGAATTTGCAAATGAGGGGTTTATGAGGGGCCAAAAGCACCTTCTTAAAAACATAAAGAGAAGGAGAGCGACAACATTTCATCATCATCACCACAACCAAACTTTTCAATCACAAGCGGCTAATGGAGCTTGTGTAGAAGTTGGTCAATTCGGAGTAGATGCTGAAATGGATCGTTTAAAACGTGACAAACAAGTGCTGATGATGGAGTTAGTGAAGCTAAGGCAAGAGCAACAAAACACAAGAGCTTATCTTCAAGCAATGGAACAAAGGCTGAGAGGAACTGAAATTAAGCAAAAACAAATGATGAATTTCTTAGCAAGAGCTATGAAAAACCCATCATTTATTCAGCAGTTGATCCAGCAAAAGGAGAAGAGGAAAGAGCTTGAAGAAGCCATAACTAAGAAAAGGAGAAGACCCATTGAACAAGCTGGTCAACATAGCAGTGGTGGTAATGGGAGATTCTTAGGTGAAGGCTCCAATTCTATAAAGATTGAACCTCTAGAAAATGATGAATATGGGTTTGGAATAACAGAGCTAGAAGCACTTGCCTTGGAGATGCAAGGGCTTGGCAAGACAAGACATGAAGATGAGGAGGAAGAAGAAGAAGAAGATGATAATTTACTTCCATCGGAAGATGAAGATAAAGTACTTGATGAAGGATTTTGGGAAGAATTGTTTAGTGAAAGGTTGGAGGTAGCTAGAAGCGGAGATGAAAATGTTAATGTCTTGGCTGATAGGTTGGGCTATTTGGGCTCAAGCCCACCATAG 1209 41.77 MMKLESGAETFIPLSHSLSAFSLFQLAQETSLLQEMNPLFPVKEEFPGSCSPDVDGEQSAIMAPPLPMEGLHDAGPPPFLTKTFEIVDDFNTDHVISWSFAGTSFIVWDPHCFSTQLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFMRGQKHLLKNIKRRRATTFHHHHHNQTFQSQAANGACVEVGQFGVDAEMDRLKRDKQVLMMELVKLRQEQQNTRAYLQAMEQRLRGTEIKQKQMMNFLARAMKNPSFIQQLIQQKEKRKELEEAITKKRRRPIEQAGQHSSGGNGRFLGEGSNSIKIEPLENDEYGFGITELEALALEMQGLGKTRHEDEEEEEEEDDNLLPSEDEDKVLDEGFWEELFSERLEVARSGDENVNVLADRLGYLGSSPP 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6318801 6321833 + CePI673135_09g007080.1 Cec09g0708 211218

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0708 402 Pfam HSF-type DNA-binding 79 168 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 Gene3D - 72 169 IPR036388 -
Cec09g0708 402 SUPERFAMILY Winged helix DNA-binding domain 75 168 IPR036390 -
Cec09g0708 402 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 60 380 IPR027725 GO:0000978(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)|GO:0034605(PANTHER)
Cec09g0708 402 MobiDBLite consensus disorder prediction 343 361 - -
Cec09g0708 402 Coils Coil 265 285 - -
Cec09g0708 402 Coils Coil 203 237 - -
Cec09g0708 402 PRINTS Heat shock factor (HSF) domain signature 79 102 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 PRINTS Heat shock factor (HSF) domain signature 130 142 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 PRINTS Heat shock factor (HSF) domain signature 117 129 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 MobiDBLite consensus disorder prediction 281 304 - -
Cec09g0708 402 SMART hsfneu3 75 168 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 MobiDBLite consensus disorder prediction 336 361 - -
Cec09g0708 402 ProSitePatterns HSF-type DNA-binding domain signature. 118 142 IPR000232 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0708 402 FunFam Heat shock transcription factor 1 72 169 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0708 K09419 - - csv:101208010 655.595
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0708 Cec-Chr9:6318801 Cec10g0148 Cec-Chr10:1430056 6.00E-61 dispersed
Cec08g1768 Cec-Chr8:28794050 Cec09g0708 Cec-Chr9:6318801 3.20E-65 transposed
Cec05g0572 Cec-Chr5:4654143 Cec09g0708 Cec-Chr9:6318801 1.00E-80 wgd
Cec07g0080 Cec-Chr7:817781 Cec09g0708 Cec-Chr9:6318801 2.60E-108 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec05g0572 . 37 237 HSF AT4G17750 59.6 2.3e-62 236.9
Cec09g0708 . 76 317 HSF AT4G17750 51.0 1.8e-59 227.3
Cec08g1768 . 42 242 HSF AT4G17750 54.6 5.9e-58 222.2
Cec03g0671 . 13 158 HSF AT4G17750 56.1 3.8e-41 166.4
Cec01g0295 . 352 490 HSF AT4G17750 56.8 2.7e-39 160.2
Cec08g1659 . 14 118 HSF AT4G17750 69.5 3.6e-39 159.8
Cec05g2220 . 20 118 HSF AT4G17750 69.7 2.3e-38 157.1
Cec05g0572 . 38 242 HSF AT5G16820 57.0 3.6e-60 229.6
Cec07g0080 . 41 262 HSF AT5G16820 52.6 2.3e-59 226.9
Cec09g0708 . 77 289 HSF AT5G16820 54.0 5.3e-56 215.7
Cec08g1768 . 43 253 HSF AT5G16820 51.1 4.5e-55 212.6
Cec04g2104 . 62 244 HSF AT5G16820 50.3 1.5e-42 171.0
Cec03g0671 . 9 150 HSF AT5G16820 57.2 4.4e-42 169.5
Cec06g0919 . 10 176 HSF AT5G16820 51.6 5.7e-42 169.1
Cec02g1911 . 13 188 HSF AT5G16820 50.3 3.7e-41 166.4
Cec10g0148 . 13 515 HSF AT1G32330 53.0 1.1e-120 430.6
Cec05g0572 . 26 227 HSF AT1G32330 54.0 1.0e-59 228.0
Cec09g0708 . 65 285 HSF AT1G32330 51.8 9.7e-58 221.5
Cec07g0080 . 27 226 HSF AT1G32330 52.6 6.3e-57 218.8
Cec08g1768 . 31 223 HSF AT1G32330 54.1 1.0e-54 211.5
Cec08g1659 . 20 117 HSF AT1G32330 72.4 2.9e-38 156.8
Cec05g2220 . 22 117 HSF AT1G32330 71.9 1.1e-37 154.8
Cec07g0080 . 41 262 HSF AT3G02990 53.1 2.8e-62 236.5
Cec05g0572 . 38 241 HSF AT3G02990 57.6 1.8e-61 233.8
Cec09g0708 . 77 300 HSF AT3G02990 52.4 1.9e-58 223.8
Cec08g1768 . 43 242 HSF AT3G02990 51.7 5.7e-55 212.2
Cec06g0919 . 10 172 HSF AT3G02990 50.3 3.6e-41 166.4
Cec03g0671 . 9 158 HSF AT3G02990 54.3 1.4e-40 164.5
Cec05g0572 . 25 287 HSF AT2G26150 52.3 1.5e-68 256.9
Cec09g0708 . 65 284 HSF AT2G26150 54.3 5.0e-64 241.9
Cec10g0148 . 8 243 HSF AT2G26150 55.7 3.0e-61 232.6
Cec03g0671 . 5 156 HSF AT2G26150 51.3 2.3e-40 163.3
Cec02g1911 . 2 189 HSF AT4G18880 52.1 5.6e-51 198.7
Cec05g0355 . 6 462 HSF AT4G13980 52.6 8.1e-118 421.0
Cec02g1911 . 4 183 HSF AT4G13980 50.6 1.7e-43 174.1
Cec05g0572 . 26 218 HSF AT5G43840 54.4 1.6e-55 213.4
Cec08g1768 . 31 234 HSF AT5G43840 50.5 1.5e-45 180.3
Cec05g0572 . 26 354 HSF AT3G22830 50.1 1.8e-89 326.6
Cec07g0080 . 16 350 HSF AT3G22830 51.2 6.4e-87 318.2
Cec08g1768 . 31 253 HSF AT3G22830 54.1 2.0e-64 243.4
Cec10g0148 . 29 242 HSF AT3G22830 58.9 1.1e-62 237.7
Cec03g0671 . 13 158 HSF AT3G22830 52.0 1.9e-38 157.1
Cec09g0708 . 64 375 HSF AT3G51910 51.4 8.7e-72 267.3
Cec07g0080 . 26 322 HSF AT3G51910 52.2 1.1e-69 260.4
Cec08g1768 . 31 223 HSF AT3G51910 56.0 4.8e-54 208.4
Cec08g1768 . 31 230 HSF AT3G63350 52.5 3.4e-50 195.7
Cec02g1911 . 5 140 HSF AT3G63350 56.6 3.8e-38 155.6
Cec11g0180 . 32 261 HSF AT5G54070 50.2 3.2e-52 202.6
Cec04g1370 . 46 334 HSF AT4G36990 52.4 1.0e-70 263.8
Cec05g0957 . 589 696 HSF AT4G36990 64.8 3.9e-38 155.6
Cec08g1659 . 17 115 HSF AT5G62020 67.7 1.8e-38 156.8
Cec01g0295 . 391 711 HSF AT4G11660 51.8 2.1e-79 293.1
Cec08g1659 . 16 121 HSF AT4G11660 71.7 3.7e-44 176.0
Cec04g1370 . 46 148 HSF AT4G11660 72.8 1.7e-41 167.2
Cec03g1299 . 20 119 HSF AT4G11660 68.0 1.0e-38 157.9
Cec10g0148 . 33 126 HSF AT4G11660 69.1 1.7e-36 150.6
Cec04g0460 . 7 214 HSF AT2G41690 51.0 2.5e-49 192.6
Cec10g1593 . 14 222 HSF AT2G41690 55.3 1.0e-47 187.2
Cec08g1659 . 9 373 HSF AT1G46264 52.2 5.0e-88 321.6
Cec05g2220 . 1 239 HSF AT1G46264 63.8 6.3e-83 304.7
Cec10g0148 . 33 138 HSF AT1G46264 73.6 3.5e-41 166.0
Cec02g1911 . 5 115 HSF AT1G46264 63.1 5.2e-37 152.1
Cec10g1593 . 21 118 HSF AT1G46264 69.4 5.2e-37 152.1
Cec05g0572 . 37 237 HSF AT4G17750 59.6 2.3e-62 236.9
Cec09g0708 . 76 317 HSF AT4G17750 51.0 1.8e-59 227.3
Cec08g1768 . 42 242 HSF AT4G17750 54.6 5.9e-58 222.2
Cec03g0671 . 13 158 HSF AT4G17750 56.1 3.8e-41 166.4
Cec01g0295 . 352 490 HSF AT4G17750 56.8 2.7e-39 160.2
Cec08g1659 . 14 118 HSF AT4G17750 69.5 3.6e-39 159.8
Cec05g2220 . 20 118 HSF AT4G17750 69.7 2.3e-38 157.1
Cec05g0572 . 38 242 HSF AT5G16820 57.0 3.6e-60 229.6
Cec07g0080 . 41 262 HSF AT5G16820 52.6 2.3e-59 226.9
Cec09g0708 . 77 289 HSF AT5G16820 54.0 5.3e-56 215.7
Cec08g1768 . 43 253 HSF AT5G16820 51.1 4.5e-55 212.6
Cec04g2104 . 62 244 HSF AT5G16820 50.3 1.5e-42 171.0
Cec03g0671 . 9 150 HSF AT5G16820 57.2 4.4e-42 169.5
Cec06g0919 . 10 176 HSF AT5G16820 51.6 5.7e-42 169.1
Cec02g1911 . 13 188 HSF AT5G16820 50.3 3.7e-41 166.4
Cec10g0148 . 13 515 HSF AT1G32330 53.0 1.1e-120 430.6
Cec05g0572 . 26 227 HSF AT1G32330 54.0 1.0e-59 228.0
Cec09g0708 . 65 285 HSF AT1G32330 51.8 9.7e-58 221.5
Cec07g0080 . 27 226 HSF AT1G32330 52.6 6.3e-57 218.8
Cec08g1768 . 31 223 HSF AT1G32330 54.1 1.0e-54 211.5
Cec08g1659 . 20 117 HSF AT1G32330 72.4 2.9e-38 156.8
Cec05g2220 . 22 117 HSF AT1G32330 71.9 1.1e-37 154.8
Cec07g0080 . 41 262 HSF AT3G02990 53.1 2.8e-62 236.5
Cec05g0572 . 38 241 HSF AT3G02990 57.6 1.8e-61 233.8
Cec09g0708 . 77 300 HSF AT3G02990 52.4 1.9e-58 223.8
Cec08g1768 . 43 242 HSF AT3G02990 51.7 5.7e-55 212.2
Cec06g0919 . 10 172 HSF AT3G02990 50.3 3.6e-41 166.4
Cec03g0671 . 9 158 HSF AT3G02990 54.3 1.4e-40 164.5
Cec05g0572 . 25 287 HSF AT2G26150 52.3 1.5e-68 256.9
Cec09g0708 . 65 284 HSF AT2G26150 54.3 5.0e-64 241.9
Cec10g0148 . 8 243 HSF AT2G26150 55.7 3.0e-61 232.6
Cec03g0671 . 5 156 HSF AT2G26150 51.3 2.3e-40 163.3
Cec02g1911 . 2 189 HSF AT4G18880 52.1 5.6e-51 198.7
Cec05g0355 . 6 462 HSF AT4G13980 52.6 8.1e-118 421.0
Cec02g1911 . 4 183 HSF AT4G13980 50.6 1.7e-43 174.1
Cec05g0572 . 26 218 HSF AT5G43840 54.4 1.6e-55 213.4
Cec08g1768 . 31 234 HSF AT5G43840 50.5 1.5e-45 180.3
Cec05g0572 . 26 354 HSF AT3G22830 50.1 1.8e-89 326.6
Cec07g0080 . 16 350 HSF AT3G22830 51.2 6.4e-87 318.2
Cec08g1768 . 31 253 HSF AT3G22830 54.1 2.0e-64 243.4
Cec10g0148 . 29 242 HSF AT3G22830 58.9 1.1e-62 237.7
Cec03g0671 . 13 158 HSF AT3G22830 52.0 1.9e-38 157.1
Cec09g0708 . 64 375 HSF AT3G51910 51.4 8.7e-72 267.3
Cec07g0080 . 26 322 HSF AT3G51910 52.2 1.1e-69 260.4
Cec08g1768 . 31 223 HSF AT3G51910 56.0 4.8e-54 208.4
Cec08g1768 . 31 230 HSF AT3G63350 52.5 3.4e-50 195.7
Cec02g1911 . 5 140 HSF AT3G63350 56.6 3.8e-38 155.6
Cec11g0180 . 32 261 HSF AT5G54070 50.2 3.2e-52 202.6
Cec04g1370 . 46 334 HSF AT4G36990 52.4 1.0e-70 263.8
Cec05g0957 . 589 696 HSF AT4G36990 64.8 3.9e-38 155.6
Cec08g1659 . 17 115 HSF AT5G62020 67.7 1.8e-38 156.8
Cec01g0295 . 391 711 HSF AT4G11660 51.8 2.1e-79 293.1
Cec08g1659 . 16 121 HSF AT4G11660 71.7 3.7e-44 176.0
Cec04g1370 . 46 148 HSF AT4G11660 72.8 1.7e-41 167.2
Cec03g1299 . 20 119 HSF AT4G11660 68.0 1.0e-38 157.9
Cec10g0148 . 33 126 HSF AT4G11660 69.1 1.7e-36 150.6
Cec04g0460 . 7 214 HSF AT2G41690 51.0 2.5e-49 192.6
Cec10g1593 . 14 222 HSF AT2G41690 55.3 1.0e-47 187.2
Cec08g1659 . 9 373 HSF AT1G46264 52.2 5.0e-88 321.6
Cec05g2220 . 1 239 HSF AT1G46264 63.8 6.3e-83 304.7
Cec10g0148 . 33 138 HSF AT1G46264 73.6 3.5e-41 166.0
Cec02g1911 . 5 115 HSF AT1G46264 63.1 5.2e-37 152.1
Cec10g1593 . 21 118 HSF AT1G46264 69.4 5.2e-37 152.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001412 1 3 2 0 1 2 2 2 2 2 2 2 2 3 2 2 2 4 2 2 2 2 2 2 2 2 2 12 6 0 72
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30194 PF00447 HSF_DNA-bind 5.90E-31 CL0123 Cec TF