Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0710 | ATGTTTGCTTCAACAATGTCCAATTCAACTTCTTTGTCTGAAGAAGCTAGTGTCTCTTCTACCACAAGAGTCCACCCTGATTTCACCTGCTTAAACCCTCTCCTTCCATCTTTTTCTGATGTTCACCACCCTCCACAAAAGCTCAAGAAGAAACGAAGCCTCCCCGGTAACCCAGACCCGGATGCGGAAGTGATAGCGCTTTCGCCAAAAACACTACTGGCAACAAATAGATTTGTGTGTGAGATTTGCAACAAGGGTTTCCAAAGGGATCAAAATTTGCAGTTGCATAGGAGAGGGCACAATTTACCATGGAAATTGAAGCAAAGAAACAGCAAAGAAGTGAAGAAGAAAGCCTATGTTTGTCCAGAACCAAGTTGTGTTCATCATCATCCTTCAAGAGCATTAGGAGATCTCACAGGAATCAAAAAACATTACTGCAGAAAACATGGTGAAAAGAAATGGAAATGTGATAAATGCTCCAAAGTTTATGCTGTTCAATCTGATTGGAAAGCTCACTCCAAAACTTGTGGCACTAGGGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGATAGCTTCATAACCCATAGAGCTTTTTGTGATGCATTGGCTGAAGAAAGTGCAAGGCTCTCAGCTAACCAATTGGCCATGGCTGCCGCCGCGGCCGCTGCCTCGGGTGCCACTGATATCAACATAAACTCATCTTCAACCACCGCCGCCGACCAGTCGCTCTTTCCTTATGGTAATCACCATCAATTCTCGAACTCGACACTATCACTACCACCACCTCCACCTCTGTCTCAAACCCACATATCTTTAAACCCTTGGGATCATCCCCAAAACCCTAACCCTAATCACACCCTCCAAATCATTAAGCCAGAGGATTCAAATTCTCATTCTTCCCATTCTCATAATTTTCACCAAATTCCAAATTTGCCCCTCTCCAATTCCTCCTCTGCCAACAACAACCCTTTTGGTCTAATTCAAGACCACCACCACCAAAAGGTAGGCTCATCCTCCTCCTCTTCCATGATAACCTCACCCTTCAGGAACCTCCACGTGTCAGTGCACCCGGGATCAAATGTTGCCACGTCAGCTCACCTATCAGCAACTGCCCTACTCCAAAAGGCAGCGACAGTTGGCGTTGGCGCTGCAAAATCCGGTCACCATCAACCCGAGTCAGTAGGCCACATGACTCACTTCAACATGCAAAACATCCCCGAGTTCGGTCCACCGAATCACATTGAATCACTGAGTCAACTTGATCCTGACTATGCCACGTGGCAGAAGACTGACCGGCTGACCAGGGACTTTCTCGGTCTGACTGGAGATGGGAACAGTGGCGTTGGTAGTGGTGGTGGTTCTGGCGGCAGTGGAGTGGTGCAAGTTAGCATGAGCGTTAAGGATATGCTAACGTACGCAAGTGGATTGGAGATGTTTAAGCCTCACAACAATAGTAATAGTAGTAATAATAATTTTGGATATGCGGAGCCAGCTGCCAACGAAACTTGGGGAGATTGTTGA | 1530 | 46.34 | MFASTMSNSTSLSEEASVSSTTRVHPDFTCLNPLLPSFSDVHHPPQKLKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKKAYVCPEPSCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKVYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQLAMAAAAAAASGATDININSSSTTAADQSLFPYGNHHQFSNSTLSLPPPPPLSQTHISLNPWDHPQNPNPNHTLQIIKPEDSNSHSSHSHNFHQIPNLPLSNSSSANNNPFGLIQDHHHQKVGSSSSSSMITSPFRNLHVSVHPGSNVATSAHLSATALLQKAATVGVGAAKSGHHQPESVGHMTHFNMQNIPEFGPPNHIESLSQLDPDYATWQKTDRLTRDFLGLTGDGNSGVGSGGGSGGSGVVQVSMSVKDMLTYASGLEMFKPHNNSNSSNNNFGYAEPAANETWGDC | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6352375 | 6355606 | + | CePI673135_09g007100.1 | Cec09g0710 | 211220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0710 | 509 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 78 | 100 | IPR013087 | - | |
Cec09g0710 | 509 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 153 | 177 | - | - | |
Cec09g0710 | 509 | FunFam | protein indeterminate-domain 12-like | 57 | 125 | - | - | |
Cec09g0710 | 509 | SUPERFAMILY | beta-beta-alpha zinc fingers | 77 | 174 | IPR036236 | - | |
Cec09g0710 | 509 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 80 | 100 | IPR013087 | - | |
Cec09g0710 | 509 | MobiDBLite | consensus disorder prediction | 486 | 509 | - | - | |
Cec09g0710 | 509 | MobiDBLite | consensus disorder prediction | 272 | 347 | - | - | |
Cec09g0710 | 509 | Gene3D | Classic Zinc Finger | 57 | 126 | - | - | |
Cec09g0710 | 509 | MobiDBLite | consensus disorder prediction | 41 | 62 | - | - | |
Cec09g0710 | 509 | Gene3D | Classic Zinc Finger | 147 | 212 | - | - | |
Cec09g0710 | 509 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 43 | 449 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec09g0710 | 509 | SMART | c2h2final6 | 154 | 174 | IPR013087 | - | |
Cec09g0710 | 509 | SMART | c2h2final6 | 78 | 100 | IPR013087 | - | |
Cec09g0710 | 509 | SMART | c2h2final6 | 119 | 149 | IPR013087 | - | |
Cec09g0710 | 509 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 132 | 211 | - | - | |
Cec09g0710 | 509 | Pfam | Zinc finger, C2H2 type | 78 | 100 | IPR013087 | - | |
Cec09g0710 | 509 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 115 | 149 | - | - | |
Cec09g0710 | 509 | MobiDBLite | consensus disorder prediction | 256 | 347 | - | - | |
Cec09g0710 | 509 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 180 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1072 | Cec-Chr2:20380393 | Cec09g0710 | Cec-Chr9:6352375 | 4.30E-89 | dispersed | |
Cec04g1633 | Cec-Chr4:35643273 | Cec09g0710 | Cec-Chr9:6352375 | 1.50E-88 | dispersed | |
Cec05g1973 | Cec-Chr5:31759727 | Cec09g0710 | Cec-Chr9:6352375 | 1.90E-86 | dispersed | |
Cec08g1569 | Cec-Chr8:27281530 | Cec09g0710 | Cec-Chr9:6352375 | 1.30E-80 | dispersed | |
Cec09g0593 | Cec-Chr9:5162250 | Cec09g0710 | Cec-Chr9:6352375 | 6.40E-81 | dispersed | |
Cec09g0710 | Cec-Chr9:6352375 | Cec11g0084 | Cec-Chr11:1068620 | 2.20E-84 | dispersed | |
Cec09g0710 | Cec-Chr9:6352375 | Cec07g1494 | Cec-Chr7:30546187 | 8.60E-89 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30195 | PF00096 | zf-C2H2 | 0.0051 | CL0361 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0710 | K25870 | - | csv:101208253 | 790.801 |