Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g0715 | ATGCTTTCTGTTGCAGTGACAAAAAGAAATGGCCATTACAGTTTACTCAACTTTGAGAACTGGCAGGAAGATTGTTATGAGGAACAAATTATCTGCACCAAAGATGATCAGAAGAAGCTGATTGAAATGGTGAAGAACAAAGACAAAGAAGCTTATCATGAGCTTGGAGAAGGTGCAACAATTGCAGCTTCTCTTGGAACGAATCCGGAGAATGGAATCAAGGACAATAGTGATATCTTGAATGAACAACGTCAAATATTTGGTTCTAACACTTACCACAAGCGGCCTCGGAAGAGTTTCTTTCATTTTGTAGTGGAAGCATTCAAGGACACCACCATCCTCATTTTACTTGTATGTGCGGCTCTGGCGCTTGGGTTTGGAATAAAAGAACATGGAGTTCAAGAAGGATGGTATGAAGGAGGGAGCATATTTGTAGCTGTTGCTTTGGTAGTTGCTGTGTCAGCAATTAGTAACTTCAGACAGGAGGTTCAATTCGACAAGTTGTCGAAAATAAGTAACAACATCAAAGTGGAGGTACTAAGAGATGGAAGGCGCATACAAGTTTCCATATTCGATATTGTGGTTGGAGATGTCGTGGTTCTAAAGCTTGGGGACCAAATTCCAGCTGATGGATTGTTCTTGAGCGGCCATTCTTTGCAGGTGGATGAGTCAAGCATGACAGGAGAAAGCGATCATGTGGAACTCAATACAACAGAGAACCCCTTCTTGTTGGCTGGAACAAAAGTAGTAGATGGCTATGGTCAGATGCTGGTGACATCAGTGGGAATGGACACAGCATGGGGTGAGATGATGAGCTCCATATCTCGGGATTCTGAGGAGCAAACACCATTGCAAGTTCGTCTTAACAAATTAACCACTTCTATAGGAAAGGTAGGCCTCTCAGTTGCTTTGCTGGTCCTTGTTGTCATGTTAGCACGCTATTTCACTGGAAACACAAAGGATGATTTTGGTAACACAGAGTACGATGGTCGAAAAACGGACATAGATGATGTGCTCAATGCAGTTATCCGTATAGTTGCTGCTGCAGTTACCATAGTAGTGGTTGCAATCCCTGAAGGCTTACCATTGGCTGTGACACTAACACTTGCTTACTCTATGAAGAGAATGATGGCAGATCAGGCAATGGTGAGGAAACTGTCGGCTTGTGAAACAATGGGATCGGCAACTGTGATTTGCACTGACAAAACAGGTACTTTGACATTAAACCAAATGAAAGTAACCAAATTCTGGCTTGGCCAAGAGTTCATTGAGGAAGACAACTCTTCCAATACCATAGCAGAGGCTGTTCATGAGTTGATAAATCAAGGAGTTGGCTTGAACACAACTGGTAGTGTCTATCGATCTTCTCCAGAATCCAAAACTGAAATCTCTGGTAGTCCAACTGAGAAAGCGATTCTATCTTGGGCGGTCACAGAATTCGGTATGGACATGGAGAAGTTGAAGAAGTCATATGCCATTCTTCATGTGGAAACCTTCAGCTCAGAGAAGAAAAGAAGTGGGGTTTTGGTGAGAAAATTGTCTGATAACACAATCCATCAGCATTGGAAAGGAGCTGCTGAGATGATACTCTCAATGTGTTCAAGTTACTTTGAAAGGAATGGGAAAACATATCACTTGGATATTGAGAACCGAAAAAAACTTGAGAACATTATCCAAGGAATGGCAGCAAGTAGCCTAAGATGCATTGCCTTTGCTTATAAACAAATCTCAGAAGACGAGGAAAAAAATGGCATGCCAAACGTCTCAAACTCAAAACAAGATGGCTATACATTAATGGGAATAGTTGGCATTAAAGATCCATGTAGGCCAGGGGTGAAGAAAGCCGTGGAAACTTGTAAATCAGCTGGAGTTTCCATTAAGATGATAACAGGAGACAACATTTTCACAGCAAAAGCTATAGCCACAGAATGTGGAATACTAGATTTTGATCACAACACTGCAAGCAGAGGCGAAGTAATAGAAGGTTCCGAGTTCCGAAACTACTTGAGTGAAGAGAGACTGCAGAGAGTTGATCAAATCAAGGTGATGGCAAGATCCACTCCATTTGACAAGCTCTTGATGGTTCAATGCTTGAAACAGAAAGGCCATGTGGTAGCAGTAACTGGAGACGGCACAAATGATGCACCGGCTCTAAAAGAAGCTGACATAGGACTTTCCATGGGCATTGAAGGCACTGAGGTTGCAAAAGAGAGTTCAGACATTGTTATCTTGGATGATAACTTCACCACAGTAGCCACAGTCTTGAGGTGGGGAAGATGTGTATATAACAACATCCAAAAATTCATCCAATTTCAATTGACGGTCAATGTCGCAGCTCTTACAATTAACTTTATAGCAGCAGTGTCAGCCGGAGAGGTTCCTTTAACAGCAGTCCAATTATTGTGGGTGAATCTCATAATGGATACATTGGGTGCTCTTGCACTTGCTACTGAGAGACCCAATGATGAATTAATGCACAAGCCTCCCGTGGGAAGAACTGAGCCCCTAATAACAAATATCATGTGGAGAAACCTATTAGCTCAAGCTCTATACCAAATAGCAATACTCTTAATTTTCCAGTTCCAAGGAAGCACCATCTTCAAAGTAAGTGCAGAGGTAAACGATACACTAATCTTCAACATTTTTGTCCTCTGCCAAATCTTTAATGAGTTCAACTCAAGAAAACTAGAGAAACGGAACGTCTTTGAAGGCATCCTAAAGAATCATTTATTTCTAGGGATCGTGGGAGTAACACTTGTTCTACAAGTTGTTATGGTAGAATTCTTAAAGAAATTTGCAAATACAGTGAATCTAAATGGTTGGCAGTGGGGACTTTGCATTGCAATTGCAGCAATTTCTTGGCCTATTGGTTGGATTGTCAAATTCTTGCCCGTTTCCGATAAGCCTTTCCTTAGCTACTTCAAATGGTTTTAA | 2934 | 41.55 | MLSVAVTKRNGHYSLLNFENWQEDCYEEQIICTKDDQKKLIEMVKNKDKEAYHELGEGATIAASLGTNPENGIKDNSDILNEQRQIFGSNTYHKRPRKSFFHFVVEAFKDTTILILLVCAALALGFGIKEHGVQEGWYEGGSIFVAVALVVAVSAISNFRQEVQFDKLSKISNNIKVEVLRDGRRIQVSIFDIVVGDVVVLKLGDQIPADGLFLSGHSLQVDESSMTGESDHVELNTTENPFLLAGTKVVDGYGQMLVTSVGMDTAWGEMMSSISRDSEEQTPLQVRLNKLTTSIGKVGLSVALLVLVVMLARYFTGNTKDDFGNTEYDGRKTDIDDVLNAVIRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTKFWLGQEFIEEDNSSNTIAEAVHELINQGVGLNTTGSVYRSSPESKTEISGSPTEKAILSWAVTEFGMDMEKLKKSYAILHVETFSSEKKRSGVLVRKLSDNTIHQHWKGAAEMILSMCSSYFERNGKTYHLDIENRKKLENIIQGMAASSLRCIAFAYKQISEDEEKNGMPNVSNSKQDGYTLMGIVGIKDPCRPGVKKAVETCKSAGVSIKMITGDNIFTAKAIATECGILDFDHNTASRGEVIEGSEFRNYLSEERLQRVDQIKVMARSTPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFTTVATVLRWGRCVYNNIQKFIQFQLTVNVAALTINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPNDELMHKPPVGRTEPLITNIMWRNLLAQALYQIAILLIFQFQGSTIFKVSAEVNDTLIFNIFVLCQIFNEFNSRKLEKRNVFEGILKNHLFLGIVGVTLVLQVVMVEFLKKFANTVNLNGWQWGLCIAIAAISWPIGWIVKFLPVSDKPFLSYFKWF | 977 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 6449927 | 6453358 | - | CePI673135_09g007150.1 | Cec09g0715 | 211225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g0715 | 977 | Pfam | haloacid dehalogenase-like hydrolase | 397 | 722 | - | - | |
| Cec09g0715 | 977 | SFLD | p-type atpase | 381 | 761 | IPR044492 | - | |
| Cec09g0715 | 977 | Gene3D | - | 80 | 275 | - | - | |
| Cec09g0715 | 977 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 22 | 965 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 600 | 611 | - | - | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 399 | 413 | - | - | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 222 | 236 | - | - | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 708 | 727 | - | - | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 732 | 744 | - | - | |
| Cec09g0715 | 977 | PRINTS | P-type cation-transporting ATPase superfamily signature | 622 | 632 | - | - | |
| Cec09g0715 | 977 | SUPERFAMILY | HAD-like | 397 | 813 | IPR036412 | - | |
| Cec09g0715 | 977 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 401 | 407 | IPR018303 | - | |
| Cec09g0715 | 977 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 406 | 604 | IPR023299 | GO:0000166(InterPro) | |
| Cec09g0715 | 977 | NCBIfam | HAD-IC family P-type ATPase | 679 | 788 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | NCBIfam | HAD-IC family P-type ATPase | 143 | 316 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | NCBIfam | HAD-IC family P-type ATPase | 342 | 441 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | SMART | Cation_ATPase_N_a_2 | 51 | 128 | IPR004014 | - | |
| Cec09g0715 | 977 | Pfam | Cation transporting ATPase, C-terminus | 793 | 963 | IPR006068 | - | |
| Cec09g0715 | 977 | FunFam | Calcium-transporting ATPase | 725 | 967 | - | - | |
| Cec09g0715 | 977 | SUPERFAMILY | Calcium ATPase, transduction domain A | 174 | 273 | IPR008250 | - | |
| Cec09g0715 | 977 | PRINTS | H+-transporting ATPase (proton pump) signature | 740 | 765 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | PRINTS | H+-transporting ATPase (proton pump) signature | 554 | 572 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | PRINTS | H+-transporting ATPase (proton pump) signature | 708 | 724 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec09g0715 | 977 | FunFam | Calcium-transporting ATPase | 601 | 753 | - | - | |
| Cec09g0715 | 977 | Gene3D | - | 396 | 753 | IPR023214 | - | |
| Cec09g0715 | 977 | FunFam | Calcium-transporting ATPase | 409 | 607 | - | - | |
| Cec09g0715 | 977 | CDD | P-type_ATPase_Ca_PMCA-like | 80 | 841 | - | - | |
| Cec09g0715 | 977 | Pfam | Cation transporter/ATPase, N-terminus | 59 | 122 | IPR004014 | - | |
| Cec09g0715 | 977 | FunFam | Calcium-transporting ATPase | 152 | 275 | - | - | |
| Cec09g0715 | 977 | SFLD | C1.7: P-type atpase like | 381 | 761 | - | - | |
| Cec09g0715 | 977 | Pfam | E1-E2 ATPase | 175 | 377 | - | - | |
| Cec09g0715 | 977 | Gene3D | - | 409 | 607 | IPR023299 | GO:0000166(InterPro) | |
| Cec09g0715 | 977 | PANTHER | CATION TRANSPORTING ATPASE | 32 | 966 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cec09g0715 | 977 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 59 | 965 | IPR023298 | - | |
| Cec09g0715 | 977 | Gene3D | - | 106 | 962 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec09g0715 | Cec-Chr9:6449927 | Cec10g1586 | Cec-Chr10:30251384 | 1.20E-232 | dispersed | |
| Cec09g0158 | Cec-Chr9:1375200 | Cec09g0715 | Cec-Chr9:6449927 | 2.30E-285 | transposed | |
| Cec11g1193 | Cec-Chr11:24541914 | Cec09g0715 | Cec-Chr9:6449927 | 1.30E-288 | transposed | |
| Cec02g1733 | Cec-Chr2:35090283 | Cec09g0715 | Cec-Chr9:6449927 | 0.00E+00 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g0715 | K01537 | - | csv:101220140 | 1709.5 |