Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0720 ATGGCGAACAATCATTCCGATACTCCGGCTGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGTTCGTCGGACCAAGGGTTAGCTGGAACTGACGGCGGATTGGCCGGAGCTGCTGCTGCTGCGGCAGCGGCGGCGGCTCAGGGTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGGGACGGTGGTGGTCATATCGCTACGATTGGGAGTGGTAGTGTCGGTGGAGCTGGGTTTCATGGCGGACCCCCTTTTCCTCTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCCTCTGGAAGTGGAAAGCGGTATTGTGGTGATGTTGTTGATGTTCGAGCTTCGTCTGTAAAAAATGTTTTTCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCCCCACATCCACCAGCAATGCGCCCTAGGGTACGTGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTGAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGTGGTAGGAACCAACCGGCATGGGAGAAGTGGTCGAACGATGGTACAGAGAGACAAGTTGCTAAACTCATGGAAGAAAATGTGGGAGCCGCAATGCAATTCCTTCAATCAAAGGCACTCTGCATCATGCCCATCTCGTTGGCTTCAGCAATTTATCACACGCAACCACCTGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAACCCTCCTCCATAG 942 51.8 MANNHSDTPADDFLEQILGISPFGSSDQGLAGTDGGLAGAAAAAAAAAAQGQAPMMLQLSSGDGGGHIATIGSGSVGGAGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGDVVDVRASSVKNVFQGQQMHATMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPP 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6507935 6511051 + CePI673135_09g007200.1 Cec09g0720 211230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0720 313 Gene3D - 152 214 IPR036638 GO:0046983(InterPro)
Cec09g0720 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 216 IPR036638 GO:0046983(InterPro)
Cec09g0720 313 Pfam Helix-loop-helix DNA-binding domain 162 207 IPR011598 GO:0046983(InterPro)
Cec09g0720 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 98 292 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cec09g0720 313 FunFam Basic helix-loop-helix transcription factor 152 214 - -
Cec09g0720 313 MobiDBLite consensus disorder prediction 138 161 - -
Cec09g0720 313 MobiDBLite consensus disorder prediction 237 256 - -
Cec09g0720 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983(InterPro)
Cec09g0720 313 SMART finulus 163 212 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1702 Cec-Chr3:35268284 Cec09g0720 Cec-Chr9:6507935 2.80E-74 dispersed
Cec06g1407 Cec-Chr6:27561354 Cec09g0720 Cec-Chr9:6507935 1.50E-46 dispersed
Cec07g0048 Cec-Chr7:548731 Cec09g0720 Cec-Chr9:6507935 4.20E-17 dispersed
Cec09g0720 Cec-Chr9:6507935 Cec09g0837 Cec-Chr9:7777346 6.60E-15 dispersed
Cec09g0720 Cec-Chr9:6507935 Cec02g1786 Cec-Chr2:35711070 2.30E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30197 PF00010 HLH 1.20E-07 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0720 - - - 0.0