Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0731 ATGGATGGATGGATGATGAAGATGATGGAAGAGGTTGAAGAAGCTAATAGGGAAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTCTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTCGTTTAATGGCGGAAACTGGAGACGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTCAAGAACTTTTTGTTTAATTCCTCTTCTTCCCCTTTTCCTCTTCCCCAATCTTTGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGATGGGTCCTCTTTGTTTGGGGAACCCATCTTTGGAATTGAACTCTAATGCCAAAAGTTGTTCAACCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCATCATCATCATCATCACTTGCTTCAGAACAGGGTGTTGTTGAACAATAATCCTAATCCTAATCCTAATCCTCCACAGCCTGAAATGATGTATCTTAGGAGCAATAATGGCATTAACTTAAATTTTGATAGCTCTAGTTGCACACAACACACAATGTCATCCACTAGGTCGTTTATATCTTCCTTGAGCATTGATGGGAGTGTAGCTAGCTTGGATGGGAGTGCCTTTCATTTGATCGGGGCACCCCGGTCTTCCGATCAGAATGCGCATCATAAGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAGATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCAATTAAGGTGCCTGCGATAAGTAACAAGCTTGCAGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCACCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCGAGGAAGCACGTCGAGCGGTGTCTCGAGGAACCTTCCATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGA 1080 43.24 MDGWMMKMMEEVEEANREAVESCHKVLNLLTVASSSQDQLKLRSRLMAETGDAVFKFRKVLCLLDSSGLGHARVRKKKVKNFLFNSSSSPFPLPQSLFLETSSPNCRMDLLQGRNLQMGPLCLGNPSLELNSNAKSCSTQQIQSQSAALYHHHHHHHHLLQNRVLLNNNPNPNPNPPQPEMMYLRSNNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVASLDGSAFHLIGAPRSSDQNAHHKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6658536 6660522 - CePI673135_09g007310.1 Cec09g0731 211241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0731 359 FunFam WRKY transcription factor 65 275 352 - -
Cec09g0731 359 MobiDBLite consensus disorder prediction 238 252 - -
Cec09g0731 359 SUPERFAMILY WRKY DNA-binding domain 289 351 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0731 359 SMART WRKY_cls 291 351 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0731 359 Pfam Plant zinc cluster domain 244 289 IPR018872 -
Cec09g0731 359 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 355 IPR044810 GO:0003700(InterPro)
Cec09g0731 359 MobiDBLite consensus disorder prediction 233 254 - -
Cec09g0731 359 Pfam WRKY DNA -binding domain 293 350 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0731 359 ProSiteProfiles WRKY domain profile. 286 352 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g0731 359 Gene3D WRKY domain 276 353 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2240 Cec-Chr5:33863963 Cec09g0731 Cec-Chr9:6658536 6.20E-47 dispersed
Cec08g1412 Cec-Chr8:25971164 Cec09g0731 Cec-Chr9:6658536 6.30E-18 dispersed
Cec09g0731 Cec-Chr9:6658536 Cec10g1159 Cec-Chr10:25359492 6.40E-22 dispersed
Cec07g0096 Cec-Chr7:997366 Cec09g0731 Cec-Chr9:6658536 2.80E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30200 PF03106 WRKY 2.90E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0731 - - - 0.0