Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0783 ATGGCAGCCTCTTCTTCTTCTCCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCTCCTTATTTCCGCCACGAGCTCGGCGCCTCCCAGTTCTCTGCCATCCACAAAGTTTTCGGTGCAAGCAATGCTTCCAAGCTTCTCGCTCACCTCCCAGTCTCCCACCGTTGCGAAGCGGCGGTGACGATCTCATACGAAGCTCAAGCGAGACTTCAAGATCCGATCTACGGTTGCGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCTTACGAAAAATCTTCATTTTATTCCGACGACCCATTACTAGATCTTCAAAGTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCGCCGGAGTTTGAACCTGCAGCGGTGCCGTATTTTGAGATGAGCGTCGTCGATTCAAATCTCGCCGGAGATTTCTGTTGCTAA 555 48.83 MAASSSSPSSPPCGACKFLRRKCVNGCIFAPYFRHELGASQFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSSFYSDDPLLDLQSWLLAESCSAAAPEFEPAAVPYFEMSVVDSNLAGDFCC 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7182849 7183614 - CePI673135_09g007830.1 Cec09g0783 211293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0783 184 Coils Coil 92 112 - -
Cec09g0783 184 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cec09g0783 184 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 125 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cec09g0783 184 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0122 Cec-Chr7:1292853 Cec09g0783 Cec-Chr9:7182849 1.90E-38 dispersed
Cec07g0123 Cec-Chr7:1302773 Cec09g0783 Cec-Chr9:7182849 2.60E-43 dispersed
Cec07g0386 Cec-Chr7:3946450 Cec09g0783 Cec-Chr9:7182849 5.50E-32 dispersed
Cec09g0783 Cec-Chr9:7182849 Cec10g1600 Cec-Chr10:30392734 2.60E-35 dispersed
Cec09g0783 Cec-Chr9:7182849 Cec06g0038 Cec-Chr6:382522 5.00E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30207 PF03195 LOB 1.20E-34 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0783 K13945 - csv:101220863 323.939