Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0833 ATGGATGAAGATTTTGATATCCCTGCTGCCGCTGACATGAACGAGGACTTGGATCTTCCTGATGATACCATAGCTCTCAAGGTTGGGGAGGAGAAAGAAATTGGAAATCAAGGCTTGAAGAAGAAGCTTCTTAAAGAAGGTGAAGGATGGGTAACTCCTGAAAATGGCGATGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTTGATTCCAGCCGCGATCGTGGAACCCCGTTTAAGTTCACTCTTGGTCAAGGACAAGTGATCAAAGGATGGGATTTGGGTATCAAAACAATGAAGAAAAATGAAAAAGCTCTTTTTACCATTCCTCCTGATTTGGCATATGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCAACATTGCAGTTCGATGTCGAGTTACTATCTTGGACAAGCGTTAAGGACATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGACAAATGGGATAATCCAAAGGACCTTGATGAAGTGCTAGTCAATTTTGAAGCTAAGCTTGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGTTGGGGATGGTTACTTTTGCCCTGCTCTCGCAAAGGCTGTAAAAACCATGAAGATAGGTGAAAAGGCACTCCTCACAGTGAAGCCACAATATGGGTTTGGGGAGAAAGGTAAATCAGCCTCTAGTAATGAAGGTGCAGTTCCACCAAATGCATCCCTCGATATTACTTTGGAGTTGGTATCTTGGAAGACTGTTTCAGAGGTTACCCCTGACAAAAAGGTTATCAAGAAAATTCTGAAAGAAGGAGAAGGTTATGAGAAGCCAAATGACGGAGCCATTGTCAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCAAGATATTTTTGAGGAAGGGATATGATGATGGTGAAGAGCCATTTGAGTTTAAAACAGACGAGGAACTAGTGATTGATGGCCTCGACAAAGCTGTGGCGACAATGAAGAAAGGTGAGATAGCCCTGCTGACAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAACAGGATTTGGCTATAGTTCCTCCAAACTCAACTGTGTATTACGAGGTTGAGCTTGTGGCTTTTGACAAGGAGAAAGAGTCATGGGATATGAATAACCAGGAAAAGATTGAAGCTGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTCAAGTCTGGAAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGTGAAGAAGAGAAAAAGCAGGCTAAGGCATTGAAAGTTGCATGCAACTTGAACAATGCAGCTTGTAAATTGAAGCTAAAGATGTACAACGAGGCAGAGAAATTGTGCACCAAGGTGCTAGAACTTGAGAGTTCAAATGTTAAGGCTCTCTATAGAAGGGCTCAAGCATATATCCAACTAGCTGACTTGGATTTGGCTGAATTTGACATCAAGAAGGCTCTCGATATCGATCCGAATAACAGGGATGTGAAATTGGAATACAAAACTCTGAAGGAGAAGGTGAAGGAATACAATAAAAAGGATGCCAAGTTTTACGGCAACATGTTTGCCAAAATGAAGAAAGTAGAATCTGCCTAA 1662 41.94 MDEDFDIPAAADMNEDLDLPDDTIALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKNEKALFTIPPDLAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILTEGDKWDNPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVGDGYFCPALAKAVKTMKIGEKALLTVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKTVSEVTPDKKVIKKILKEGEGYEKPNDGAIVKVKLIGKLGDGKIFLRKGYDDGEEPFEFKTDEELVIDGLDKAVATMKKGEIALLTIAPEYAFGSSESQQDLAIVPPNSTVYYEVELVAFDKEKESWDMNNQEKIEAAGKKKEEGNVLFKSGKFARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKMYNEAEKLCTKVLELESSNVKALYRRAQAYIQLADLDLAEFDIKKALDIDPNNRDVKLEYKTLKEKVKEYNKKDAKFYGNMFAKMKKVESA 553
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 7738915 7743051 + CePI673135_09g008330.1 Cec09g0833 211343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0833 553 Gene3D - 262 383 IPR046357 GO:0003755(InterPro)
Cec09g0833 553 Pfam Tetratricopeptide repeat 482 515 IPR019734 GO:0005515(InterPro)
Cec09g0833 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 257 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515(InterPro)
Cec09g0833 553 FunFam Peptidylprolyl isomerase 148 261 - -
Cec09g0833 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 FunFam Peptidylprolyl isomerase 262 384 - -
Cec09g0833 553 SUPERFAMILY FKBP-like 33 148 - -
Cec09g0833 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755(InterPro)
Cec09g0833 553 Gene3D - 31 147 IPR046357 GO:0003755(InterPro)
Cec09g0833 553 SUPERFAMILY TPR-like 387 547 IPR011990 GO:0005515(InterPro)
Cec09g0833 553 FunFam Peptidylprolyl isomerase 29 147 - -
Cec09g0833 553 Gene3D - 148 261 IPR046357 GO:0003755(InterPro)
Cec09g0833 553 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515(InterPro)
Cec09g0833 553 Coils Coil 515 535 - -
Cec09g0833 553 SUPERFAMILY FKBP-like 148 264 - -
Cec09g0833 553 SUPERFAMILY FKBP-like 264 399 - -
Cec09g0833 553 PANTHER PEPTIDYLPROLYL ISOMERASE 31 143 IPR050754 -
Cec09g0833 553 FunFam Peptidylprolyl isomerase 387 542 - -
Cec09g0833 553 SMART tpr_5 399 432 IPR019734 GO:0005515(InterPro)
Cec09g0833 553 SMART tpr_5 482 515 IPR019734 GO:0005515(InterPro)
Cec09g0833 553 SMART tpr_5 448 481 IPR019734 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0847 Cec-Chr5:7152297 Cec09g0833 Cec-Chr9:7738915 4.50E-243 dispersed
Cec07g1630 Cec-Chr7:31821645 Cec09g0833 Cec-Chr9:7738915 1.20E-10 dispersed
Cec09g0833 Cec-Chr9:7738915 Cec11g0703 Cec-Chr11:7768907 4.10E-20 dispersed
Cec09g0833 Cec-Chr9:7738915 Cec05g0894 Cec-Chr5:7731468 3.90E-18 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0833 K09571 - csv:101214513 1047.73