Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0841 ATGAACGATGTGAGAGGTCAAGAACAAATTCCCGAATTAGATTTTGGAAAATTGGAAGTGGTGACGGCGCTCGGCCGGGGAGCGAAGGGAGTCGTGTTCTTGGCTCGAAATGCGGTAGGGGACGACGACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGAGAATTAATCGAGAGGAAGGCCAAGATTGTGAATAGCGATGGAGCTGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTGCGGCTTTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACTCAGAAAGTTGTAGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATACTCTCAGGAAAAAACAGACCGAAAAAATGTTCTCCGACGACGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGTCTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAACGTTATGGTTCAACACAGCGGCCATATAATGCTTGTGGATTTTGATCTCTCTACCAGACTCTCTCAAAAATCTCCGAAATCGTCTCCGTCTCCGTCGCCGTCGCCGTCGCCGTCGCCATCGCCGGCGGTAGAGGTTTTGGCGGAGTCTAAATTCGCGATGAAGGAAAAGATTAACAAGAAAAAGAACAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCATATCACCGGAGGAATCCGAACATCGGGCTACGGCGGCGGAGAAACCAAGATCGCTGCCGGAGTCGCCGGATTCGGAGTCGTCGGAGAAGTCGAACTCGTTCGTGGGAACAGAGGACTACGTGGCACCGGAAATCGTTGCCGGGAAGGGTCATGACTTCGCCGTGGACTGGTGGTCACTCGGCGTAGTTCTGTACGAAATGCTGTACGGAACGACGCCATTTAGGGGCTCGAATCGGAAGGAAACATTCTACCGGATTCTAACGAAAACGCCGGATCTGTGCGGTGAAGCGACGGCGTTAAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGAAGAAGAGAATCGAACTGGAGGAAATCAAGGGCCACGATTTCTTTAAAGGGACTGACTGGGATTTAGTTCTGGAAATGCCCCGGCCGCCGTCGCTACCTGAAATGGCGGAAGAGGACATAAATGGAAATAACTTAATTGATGTGGAGTCTTTTGTACAAGACGTATTTTGCAGAGAAATGGAGAAGAAGAATCAAATTAACGGTGATGAAGGAAAAGGGTTAATTCCTAATTACACGGACTCTGACACATTTCATGTGTTCTAA 1305 47.97 MNDVRGQEQIPELDFGKLEVVTALGRGAKGVVFLARNAVGDDDGEWLALKVISRELIERKAKIVNSDGAEYRRVCFEREVLRLFRHPLLPRLRGVLNTQKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHSGHIMLVDFDLSTRLSQKSPKSSPSPSPSPSPSPSPAVEVLAESKFAMKEKINKKKNKKRFFHFHRFCNSGISPEESEHRATAAEKPRSLPESPDSESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPKKRIELEEIKGHDFFKGTDWDLVLEMPRPPSLPEMAEEDINGNNLIDVESFVQDVFCREMEKKNQINGDEGKGLIPNYTDSDTFHVF 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7884230 7885631 + CePI673135_09g008410.1 Cec09g0841 211351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0841 434 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Cec09g0841 434 MobiDBLite consensus disorder prediction 237 269 - -
Cec09g0841 434 MobiDBLite consensus disorder prediction 179 202 - -
Cec09g0841 434 FunFam Serine/threonine-protein kinase OXI1 113 181 - -
Cec09g0841 434 ProSiteProfiles Protein kinase domain profile. 18 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0841 434 FunFam Serine/threonine-protein kinase OXI1 264 381 - -
Cec09g0841 434 Gene3D Transferase(Phosphotransferase) domain 1 113 183 - -
Cec09g0841 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0841 434 Gene3D Transferase(Phosphotransferase) domain 1 262 381 - -
Cec09g0841 434 PANTHER FLIPPASE KINASE 1-RELATED 9 385 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec09g0841 434 SMART serkin_6 18 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0841 434 MobiDBLite consensus disorder prediction 242 259 - -
Cec09g0841 434 SUPERFAMILY Protein kinase-like (PK-like) 16 388 IPR011009 -
Cec09g0841 434 Pfam Protein kinase domain 19 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0841 434 Pfam Protein kinase domain 261 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0841 Cec-Chr9:7884230 Cec10g1395 Cec-Chr10:28259783 2.60E-54 dispersed
Cec09g0841 Cec-Chr9:7884230 Cec02g2456 Cec-Chr2:41702933 4.60E-75 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72256 PF00069 Pkinase 6.60E-30 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0841 K20714 - csv:101223223 661.759