Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0841 | ATGAACGATGTGAGAGGTCAAGAACAAATTCCCGAATTAGATTTTGGAAAATTGGAAGTGGTGACGGCGCTCGGCCGGGGAGCGAAGGGAGTCGTGTTCTTGGCTCGAAATGCGGTAGGGGACGACGACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGAGAATTAATCGAGAGGAAGGCCAAGATTGTGAATAGCGATGGAGCTGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTGCGGCTTTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACTCAGAAAGTTGTAGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATACTCTCAGGAAAAAACAGACCGAAAAAATGTTCTCCGACGACGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGTCTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAACGTTATGGTTCAACACAGCGGCCATATAATGCTTGTGGATTTTGATCTCTCTACCAGACTCTCTCAAAAATCTCCGAAATCGTCTCCGTCTCCGTCGCCGTCGCCGTCGCCGTCGCCATCGCCGGCGGTAGAGGTTTTGGCGGAGTCTAAATTCGCGATGAAGGAAAAGATTAACAAGAAAAAGAACAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCATATCACCGGAGGAATCCGAACATCGGGCTACGGCGGCGGAGAAACCAAGATCGCTGCCGGAGTCGCCGGATTCGGAGTCGTCGGAGAAGTCGAACTCGTTCGTGGGAACAGAGGACTACGTGGCACCGGAAATCGTTGCCGGGAAGGGTCATGACTTCGCCGTGGACTGGTGGTCACTCGGCGTAGTTCTGTACGAAATGCTGTACGGAACGACGCCATTTAGGGGCTCGAATCGGAAGGAAACATTCTACCGGATTCTAACGAAAACGCCGGATCTGTGCGGTGAAGCGACGGCGTTAAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGAAGAAGAGAATCGAACTGGAGGAAATCAAGGGCCACGATTTCTTTAAAGGGACTGACTGGGATTTAGTTCTGGAAATGCCCCGGCCGCCGTCGCTACCTGAAATGGCGGAAGAGGACATAAATGGAAATAACTTAATTGATGTGGAGTCTTTTGTACAAGACGTATTTTGCAGAGAAATGGAGAAGAAGAATCAAATTAACGGTGATGAAGGAAAAGGGTTAATTCCTAATTACACGGACTCTGACACATTTCATGTGTTCTAA | 1305 | 47.97 | MNDVRGQEQIPELDFGKLEVVTALGRGAKGVVFLARNAVGDDDGEWLALKVISRELIERKAKIVNSDGAEYRRVCFEREVLRLFRHPLLPRLRGVLNTQKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHSGHIMLVDFDLSTRLSQKSPKSSPSPSPSPSPSPSPAVEVLAESKFAMKEKINKKKNKKRFFHFHRFCNSGISPEESEHRATAAEKPRSLPESPDSESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPKKRIELEEIKGHDFFKGTDWDLVLEMPRPPSLPEMAEEDINGNNLIDVESFVQDVFCREMEKKNQINGDEGKGLIPNYTDSDTFHVF | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7884230 | 7885631 | + | CePI673135_09g008410.1 | Cec09g0841 | 211351 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0841 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 112 | - | - | |
Cec09g0841 | 434 | MobiDBLite | consensus disorder prediction | 237 | 269 | - | - | |
Cec09g0841 | 434 | MobiDBLite | consensus disorder prediction | 179 | 202 | - | - | |
Cec09g0841 | 434 | FunFam | Serine/threonine-protein kinase OXI1 | 113 | 181 | - | - | |
Cec09g0841 | 434 | ProSiteProfiles | Protein kinase domain profile. | 18 | 362 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g0841 | 434 | FunFam | Serine/threonine-protein kinase OXI1 | 264 | 381 | - | - | |
Cec09g0841 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 113 | 183 | - | - | |
Cec09g0841 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 150 | 162 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g0841 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 262 | 381 | - | - | |
Cec09g0841 | 434 | PANTHER | FLIPPASE KINASE 1-RELATED | 9 | 385 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cec09g0841 | 434 | SMART | serkin_6 | 18 | 362 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g0841 | 434 | MobiDBLite | consensus disorder prediction | 242 | 259 | - | - | |
Cec09g0841 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 388 | IPR011009 | - | |
Cec09g0841 | 434 | Pfam | Protein kinase domain | 19 | 186 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g0841 | 434 | Pfam | Protein kinase domain | 261 | 362 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0841 | Cec-Chr9:7884230 | Cec10g1395 | Cec-Chr10:28259783 | 2.60E-54 | dispersed | |
Cec09g0841 | Cec-Chr9:7884230 | Cec02g2456 | Cec-Chr2:41702933 | 4.60E-75 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72256 | PF00069 | Pkinase | 6.60E-30 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0841 | K20714 | - | csv:101223223 | 661.759 |