Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0860 ATGCTCTTCCAAGACGGCGTGACTTGTTTGGATTCACATGGTATAGCTATGCTATGCTCATGCTGCCCTAGAGTATCTGATAAAGGAAATCAGAAGAAGCCAAATAATCATATCGACGCCTTCCACAATGTTCTTTGTATCGGTCAGATTGTGGATCTCCTTGCTGAGGAGCCAAACTACATTAGAATTATAGTGAGTGATAAACAACTACCAAAGGAACTTCCCTTCTCTCTTTATAACCCACCAACCCTGTCTGCCTCTCTACACAACTCTTCTCATTTCCGAGCTATGGAAAACACTAAACTTTCATTACCTCTCTTTGCTGCTTTACTCCTCACAAATGCTATTGTTGTTTTAGCCAATTCCAATGAGAATAGTGACATGAATAATAACTTGAGTGTCATAGAAAACTCATGTGCCATTACTCTTTATCCTCAACTATGTCAATCAACAATATACTCCATCGTCGGAACATCCAACTTGTTGAGTTTGAAAGATATTGTTGAAGTGTCATTGAGTGTTGCTGTTGATGCAGCTAAGCATAACTACAAAAACATCAACAAACTTTGGATGTCACTTAATGATGTTAGTAAACGAGACAAGATTGCGCTTCGTGATTGTGTGGAAACCACAGATAGGGCGATTTATGAACTTCACAAGGCCGTAGAGGATCTTCGTGAGTATCCCAACAAGAAATCTCTTACCTTGTACGCTGATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGAGACTTGTTTGGAGGGATTGTCACATGAGAAAACAGAGAAATGGGTGTTGAAGCTGATTGAAAGCACACATATTCACGTCACAAAGTTGTGTAGTAATACATTGGCTTTGGTTAAGAAATTGACACACACTGATTTTACAAATCAAAAAACCAATAAAGTAACTTCTGACCACCCCACAATTGTACTCTTTTCCCACCATGTCGATCAGGAGGAAGGTGAGAATAGAGGAATTAGGGAGGATTTAGAAGACGGAAGAAAGTGGCCAGAATGGATGGCGAGCCGTGACCGGAGGCTTTTGGAGTCATCGTACGAAGGTACGGCGGACGTGGTGGTGGCGGCGGATGGAAGTGGAAATTATAAAACGGTGTCGGAGGCGGTGGCGGCGGCGCCGAGTAAGAGCAGCAAAAGATATGTAATAAGAATAAAGGGTGGAGTTTACAAGGAAAATGTTGATGTGCCAAGTAGTAAAACCAATATTATGTTTTGGGGAGATGGAAGATCCAACACCATTATCACTGCTAGCAGAAGTGTTGGGGGTGGCAGTACAACCTTCAATTCCGCCACAGTTGCTGCTGTGGGGGATGGATTTTTAGCTCGGGACATAACCTTTCAAAACACAGCAGGAGCAGCCAATGACCAAGCTGTAGCTCTCCGTGTTGGCTCAGATCGCTCAGCCTTCTACCGTTGTGGCATGCTAGCCTACCAAGACACTCTCTACGTCCATTCGAACCGTCAGTTCTTCGTCAACTGCGTCGTTGCAGGCACAGTCGATTTCATCTTCGGAAACGCAGCAGTCGTATTCCAAAACTCCGACCTCACCCCTCGCAAACCAGGCCCTAGGCAACAGAACATGGTCACAGCACAAGGAAGAACTGACCCGAATCAAAACACGGGAATCGTGATCCAAAAGTGTAAAATAAAAGCGACGTCGGACTTGGAGCCGGTGATAAAAGAATTCCCAAGCTTCCTCGGGAGACCATGGAAGGAATATGCTAGGGTTGTGGTAATGCAAACGGACATAACCAATGTGATAGACTCAAAAGGGTGGGCGCCATGGGGTAGTGAAATAAAGAAACCCTACTTTGCGGAATATGATAATAATGGAGCTGGAGCCAATACTTGTTGTAGAGTGACATGGTCTACACTTATTAATGCAGCTCAAGCTAAGACCTTTACTGCTGAACCATTCATAGATGGTGCTAATTGGCTCCCATCCACTGGCTTCCCCTATCAGCTTGGCCTCTAA 2004 44.16 MLFQDGVTCLDSHGIAMLCSCCPRVSDKGNQKKPNNHIDAFHNVLCIGQIVDLLAEEPNYIRIIVSDKQLPKELPFSLYNPPTLSASLHNSSHFRAMENTKLSLPLFAALLLTNAIVVLANSNENSDMNNNLSVIENSCAITLYPQLCQSTIYSIVGTSNLLSLKDIVEVSLSVAVDAAKHNYKNINKLWMSLNDVSKRDKIALRDCVETTDRAIYELHKAVEDLREYPNKKSLTLYADDLKTFLSSAITNQETCLEGLSHEKTEKWVLKLIESTHIHVTKLCSNTLALVKKLTHTDFTNQKTNKVTSDHPTIVLFSHHVDQEEGENRGIREDLEDGRKWPEWMASRDRRLLESSYEGTADVVVAADGSGNYKTVSEAVAAAPSKSSKRYVIRIKGGVYKENVDVPSSKTNIMFWGDGRSNTIITASRSVGGGSTTFNSATVAAVGDGFLARDITFQNTAGAANDQAVALRVGSDRSAFYRCGMLAYQDTLYVHSNRQFFVNCVVAGTVDFIFGNAAVVFQNSDLTPRKPGPRQQNMVTAQGRTDPNQNTGIVIQKCKIKATSDLEPVIKEFPSFLGRPWKEYARVVVMQTDITNVIDSKGWAPWGSEIKKPYFAEYDNNGAGANTCCRVTWSTLINAAQAKTFTAEPFIDGANWLPSTGFPYQLGL 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8088371 8094867 + CePI673135_09g008600.1 Cec09g0860 211370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0860 667 ProSitePatterns Pectinesterase signature 2. 505 514 IPR033131 -
Cec09g0860 667 Pfam Plant invertase/pectin methylesterase inhibitor 134 289 IPR006501 GO:0004857(InterPro)
Cec09g0860 667 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 134 294 IPR035513 -
Cec09g0860 667 SUPERFAMILY Pectin lyase-like 360 666 IPR011050 -
Cec09g0860 667 NCBIfam pectinesterase inhibitor domain 107 294 IPR006501 GO:0004857(InterPro)
Cec09g0860 667 Gene3D - 356 667 IPR012334 -
Cec09g0860 667 MobiDBLite consensus disorder prediction 524 545 - -
Cec09g0860 667 Gene3D Invertase/pectin methylesterase inhibitor family protein 131 295 IPR035513 -
Cec09g0860 667 FunFam Pectinesterase 355 667 - -
Cec09g0860 667 CDD PMEI-like_3 138 294 - -
Cec09g0860 667 Pfam Pectinesterase 361 652 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec09g0860 667 PANTHER PECTINESTERASE 109 658 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec09g0860 667 SMART PMEI_2 130 289 IPR006501 GO:0004857(InterPro)
Cec09g0860 667 FunFam Pectinesterase 131 294 - -
Cec09g0860 667 ProSitePatterns Pectinesterase signature 1. 386 405 IPR018040 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0142 Cec-Chr9:1250167 Cec09g0860 Cec-Chr9:8088371 4.50E-174 dispersed
Cec09g0860 Cec-Chr9:8088371 Cec10g0006 Cec-Chr10:119820 1.30E-92 dispersed
Cec09g0860 Cec-Chr9:8088371 Cec07g1548 Cec-Chr7:31022653 1.40E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0860 K01051 - csv:101221055 857.44