Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0860 | ATGCTCTTCCAAGACGGCGTGACTTGTTTGGATTCACATGGTATAGCTATGCTATGCTCATGCTGCCCTAGAGTATCTGATAAAGGAAATCAGAAGAAGCCAAATAATCATATCGACGCCTTCCACAATGTTCTTTGTATCGGTCAGATTGTGGATCTCCTTGCTGAGGAGCCAAACTACATTAGAATTATAGTGAGTGATAAACAACTACCAAAGGAACTTCCCTTCTCTCTTTATAACCCACCAACCCTGTCTGCCTCTCTACACAACTCTTCTCATTTCCGAGCTATGGAAAACACTAAACTTTCATTACCTCTCTTTGCTGCTTTACTCCTCACAAATGCTATTGTTGTTTTAGCCAATTCCAATGAGAATAGTGACATGAATAATAACTTGAGTGTCATAGAAAACTCATGTGCCATTACTCTTTATCCTCAACTATGTCAATCAACAATATACTCCATCGTCGGAACATCCAACTTGTTGAGTTTGAAAGATATTGTTGAAGTGTCATTGAGTGTTGCTGTTGATGCAGCTAAGCATAACTACAAAAACATCAACAAACTTTGGATGTCACTTAATGATGTTAGTAAACGAGACAAGATTGCGCTTCGTGATTGTGTGGAAACCACAGATAGGGCGATTTATGAACTTCACAAGGCCGTAGAGGATCTTCGTGAGTATCCCAACAAGAAATCTCTTACCTTGTACGCTGATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGAGACTTGTTTGGAGGGATTGTCACATGAGAAAACAGAGAAATGGGTGTTGAAGCTGATTGAAAGCACACATATTCACGTCACAAAGTTGTGTAGTAATACATTGGCTTTGGTTAAGAAATTGACACACACTGATTTTACAAATCAAAAAACCAATAAAGTAACTTCTGACCACCCCACAATTGTACTCTTTTCCCACCATGTCGATCAGGAGGAAGGTGAGAATAGAGGAATTAGGGAGGATTTAGAAGACGGAAGAAAGTGGCCAGAATGGATGGCGAGCCGTGACCGGAGGCTTTTGGAGTCATCGTACGAAGGTACGGCGGACGTGGTGGTGGCGGCGGATGGAAGTGGAAATTATAAAACGGTGTCGGAGGCGGTGGCGGCGGCGCCGAGTAAGAGCAGCAAAAGATATGTAATAAGAATAAAGGGTGGAGTTTACAAGGAAAATGTTGATGTGCCAAGTAGTAAAACCAATATTATGTTTTGGGGAGATGGAAGATCCAACACCATTATCACTGCTAGCAGAAGTGTTGGGGGTGGCAGTACAACCTTCAATTCCGCCACAGTTGCTGCTGTGGGGGATGGATTTTTAGCTCGGGACATAACCTTTCAAAACACAGCAGGAGCAGCCAATGACCAAGCTGTAGCTCTCCGTGTTGGCTCAGATCGCTCAGCCTTCTACCGTTGTGGCATGCTAGCCTACCAAGACACTCTCTACGTCCATTCGAACCGTCAGTTCTTCGTCAACTGCGTCGTTGCAGGCACAGTCGATTTCATCTTCGGAAACGCAGCAGTCGTATTCCAAAACTCCGACCTCACCCCTCGCAAACCAGGCCCTAGGCAACAGAACATGGTCACAGCACAAGGAAGAACTGACCCGAATCAAAACACGGGAATCGTGATCCAAAAGTGTAAAATAAAAGCGACGTCGGACTTGGAGCCGGTGATAAAAGAATTCCCAAGCTTCCTCGGGAGACCATGGAAGGAATATGCTAGGGTTGTGGTAATGCAAACGGACATAACCAATGTGATAGACTCAAAAGGGTGGGCGCCATGGGGTAGTGAAATAAAGAAACCCTACTTTGCGGAATATGATAATAATGGAGCTGGAGCCAATACTTGTTGTAGAGTGACATGGTCTACACTTATTAATGCAGCTCAAGCTAAGACCTTTACTGCTGAACCATTCATAGATGGTGCTAATTGGCTCCCATCCACTGGCTTCCCCTATCAGCTTGGCCTCTAA | 2004 | 44.16 | MLFQDGVTCLDSHGIAMLCSCCPRVSDKGNQKKPNNHIDAFHNVLCIGQIVDLLAEEPNYIRIIVSDKQLPKELPFSLYNPPTLSASLHNSSHFRAMENTKLSLPLFAALLLTNAIVVLANSNENSDMNNNLSVIENSCAITLYPQLCQSTIYSIVGTSNLLSLKDIVEVSLSVAVDAAKHNYKNINKLWMSLNDVSKRDKIALRDCVETTDRAIYELHKAVEDLREYPNKKSLTLYADDLKTFLSSAITNQETCLEGLSHEKTEKWVLKLIESTHIHVTKLCSNTLALVKKLTHTDFTNQKTNKVTSDHPTIVLFSHHVDQEEGENRGIREDLEDGRKWPEWMASRDRRLLESSYEGTADVVVAADGSGNYKTVSEAVAAAPSKSSKRYVIRIKGGVYKENVDVPSSKTNIMFWGDGRSNTIITASRSVGGGSTTFNSATVAAVGDGFLARDITFQNTAGAANDQAVALRVGSDRSAFYRCGMLAYQDTLYVHSNRQFFVNCVVAGTVDFIFGNAAVVFQNSDLTPRKPGPRQQNMVTAQGRTDPNQNTGIVIQKCKIKATSDLEPVIKEFPSFLGRPWKEYARVVVMQTDITNVIDSKGWAPWGSEIKKPYFAEYDNNGAGANTCCRVTWSTLINAAQAKTFTAEPFIDGANWLPSTGFPYQLGL | 667 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8088371 | 8094867 | + | CePI673135_09g008600.1 | Cec09g0860 | 211370 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0860 | 667 | ProSitePatterns | Pectinesterase signature 2. | 505 | 514 | IPR033131 | - | |
Cec09g0860 | 667 | Pfam | Plant invertase/pectin methylesterase inhibitor | 134 | 289 | IPR006501 | GO:0004857(InterPro) | |
Cec09g0860 | 667 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 134 | 294 | IPR035513 | - | |
Cec09g0860 | 667 | SUPERFAMILY | Pectin lyase-like | 360 | 666 | IPR011050 | - | |
Cec09g0860 | 667 | NCBIfam | pectinesterase inhibitor domain | 107 | 294 | IPR006501 | GO:0004857(InterPro) | |
Cec09g0860 | 667 | Gene3D | - | 356 | 667 | IPR012334 | - | |
Cec09g0860 | 667 | MobiDBLite | consensus disorder prediction | 524 | 545 | - | - | |
Cec09g0860 | 667 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 131 | 295 | IPR035513 | - | |
Cec09g0860 | 667 | FunFam | Pectinesterase | 355 | 667 | - | - | |
Cec09g0860 | 667 | CDD | PMEI-like_3 | 138 | 294 | - | - | |
Cec09g0860 | 667 | Pfam | Pectinesterase | 361 | 652 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cec09g0860 | 667 | PANTHER | PECTINESTERASE | 109 | 658 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Cec09g0860 | 667 | SMART | PMEI_2 | 130 | 289 | IPR006501 | GO:0004857(InterPro) | |
Cec09g0860 | 667 | FunFam | Pectinesterase | 131 | 294 | - | - | |
Cec09g0860 | 667 | ProSitePatterns | Pectinesterase signature 1. | 386 | 405 | IPR018040 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0142 | Cec-Chr9:1250167 | Cec09g0860 | Cec-Chr9:8088371 | 4.50E-174 | dispersed | |
Cec09g0860 | Cec-Chr9:8088371 | Cec10g0006 | Cec-Chr10:119820 | 1.30E-92 | dispersed | |
Cec09g0860 | Cec-Chr9:8088371 | Cec07g1548 | Cec-Chr7:31022653 | 1.40E-179 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0860 | K01051 | - | csv:101221055 | 857.44 |