Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0893 ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCAAGAAGAACAAAGAGTGGTAGAAAGGAACAGTCTGTTTCGTCGCATTCTCGTAGTCATAAACAACAACAACAACAACAACAACAACAACCGCCACCGCCGCCGCAACAACAACATCATCCGGCTCCTCCACCTCCACGTTCTACGCCTACAGACATTCCAAAGGGAAATCAGGTTCAAAAGGAAGCAGAGAAAGAGAAAGAGAAAGAGAATGAGATTATTGGGGAAAAGAATAACATTGCAGCACAAACCTTCACCTTCAGAGAATTGGCCACTGCTACAAAGAATTTCCGTCAAGAATGTCTCATTGGTGAAGGAGGGTTTGGGAGAGTTTACAAAGGAAAACTCGATAAAACTAATCAGGTTGTAGCAGTGAAGCAGCTTGACAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAAGTTTTGATGCTAAGCCTTTTACACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGTGATCAAAGACTCTTGGTCTATGAGTACATGCCTTTAGGATCTCTGGAAGATCATCTACTTGATCTTCCTTATGGAAGGAAGGCATTGGATTGGGGAACAAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTAGAATACTTGCATAACAAAGCCAACCCACCAGTGATATATAGAGACTTGAAATCATCAAACATACTATTGGACGGTGATTACAATGCAAAGCTGTCAGATTTTGGACTTGCAAAGCTTGGTCCTGTTGGAGACAAGTCCCATGTTTCCTCCAGAGTTATGGGAACCTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGTCAACTTACTCTCAAATCTGATGTCTATAGCTTTGGCGTCGTTTTGTTGGAACTCATCACTGGCAAGAGAGTCATCGACAACACTCGTCCAGCTAAACAACAAAACTTGGTCGCTTGGGCATGCCCAATATTCAAGGAACCAGCTAGATTCAAGGAGTTGGCAGATCCTCTTCTTGGTGGAGACTTTCCTATAAGGGCTCTGAACCAAGCGATCGCGGTCGCCGCCATGTGCCTCCATGAGGAAGCGACGACCCGACCGTTGATCTGCGACGTTGTCACTGCTCTCAGCTTCTTAGGAGCAGAAGCCACACAGTCGTCGAGGTCTTCGTCGTTAGGTGATGTCCCATCACCCGTTGATGATTCCAATTTGATGAATCTATCTAAACCCATCGACTATCTTCACAATGACGAAACAGCTGAGGCACGCCAACGAGCGGTCGCCGAGGCCATGGAATGGGGTTCGTCCTCCAAGCAAAATGCTGCAGCTTCGCGCCCGGGAAGTTCTTCGTCCTTGTAA 1383 45.84 MSCFPCFSSHGKAARRTKSGRKEQSVSSHSRSHKQQQQQQQQQPPPPPQQQHHPAPPPPRSTPTDIPKGNQVQKEAEKEKEKENEIIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTNQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPYGRKALDWGTRMKVGLGAAKGLEYLHNKANPPVIYRDLKSSNILLDGDYNAKLSDFGLAKLGPVGDKSHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPAKQQNLVAWACPIFKEPARFKELADPLLGGDFPIRALNQAIAVAAMCLHEEATTRPLICDVVTALSFLGAEATQSSRSSSLGDVPSPVDDSNLMNLSKPIDYLHNDETAEARQRAVAEAMEWGSSSKQNAAASRPGSSSSL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8442863 8446262 - CePI673135_09g008930.1 Cec09g0893 211403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0893 460 SUPERFAMILY beta-sandwich domain of Sec23/24 28 104 - -
Cec09g0893 460 FunFam Serine/threonine-protein kinase PBS1 187 400 - -
Cec09g0893 460 FunFam Serine/threonine-protein kinase PBS1 78 186 - -
Cec09g0893 460 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524(InterPro)
Cec09g0893 460 MobiDBLite consensus disorder prediction 41 64 - -
Cec09g0893 460 SUPERFAMILY Protein kinase-like (PK-like) 96 393 IPR011009 -
Cec09g0893 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0893 460 MobiDBLite consensus disorder prediction 71 88 - -
Cec09g0893 460 MobiDBLite consensus disorder prediction 1 88 - -
Cec09g0893 460 CDD STKc_IRAK 116 384 - -
Cec09g0893 460 SMART serkin_6 110 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0893 460 ProSiteProfiles Protein kinase domain profile. 110 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0893 460 MobiDBLite consensus disorder prediction 441 460 - -
Cec09g0893 460 Gene3D Transferase(Phosphotransferase) domain 1 187 402 - -
Cec09g0893 460 Gene3D Phosphorylase Kinase; domain 1 68 186 - -
Cec09g0893 460 PANTHER OS07G0668900 PROTEIN 37 396 - -
Cec09g0893 460 MobiDBLite consensus disorder prediction 430 460 - -
Cec09g0893 460 Pfam Protein kinase domain 112 381 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1152 Cec-Chr3:25220161 Cec09g0893 Cec-Chr9:8442863 5.50E-121 dispersed
Cec09g0893 Cec-Chr9:8442863 Cec10g2072 Cec-Chr10:35445360 3.70E-131 dispersed
Cec09g0887 Cec-Chr9:8372045 Cec09g0893 Cec-Chr9:8442863 8.50E-63 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72258 PF00069 Pkinase 5.10E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0893 - - - 0.0