Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0907 ATGGCGATTCTGAAGCTTTTTTCTCTCTGCATTTTCTTCTTCTTATTGATCAGAGCCCCAGTACGATGTGATTCCTTACATTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTTTTCTTCTGATGTTCAGCTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGAGACACTCAAAACTTGCTCTTGTCTTCATGGAATTACTCTCTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTACTGGAACTCCACTGGTCTGCAGTGATTCTTCTTCTCCACACTGGTCTAATCTCACTCTTTTCAAAGACCCTTCGCTTCATGTTCTCTCTTTGCAACTTCCATCTGCTAATCTCACTGGTTCGTTGCCCAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGCCTCTATCTAAGTATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTTTTGACTGGAGCTCTTCCACCCTCGATCTGGAATCTGTGTGAGAAACTTGTTTCTGTCAGACTACATGGCAATTCATTATCTGGGTCACTGCCGGAGCCGGCTTTACCAAACTCCACCTGCAAGAATTTGGAGGCTTTGGATTTGGGCAACAATCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGATTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAAAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCAAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTAGTAACTCAAAGTTTGGTGTTGAGGCTTTTGAAGGGAATAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGTCTGGGACGGTGGTTTTAGCTTCGTTGCTTATTGGTTATATGCAAAACAAGAAGAAGAAGAGTATGAGTGAGAGTGAAGATGAGATTGACGAAGGAGAAGATGAAGAGAATGGTGGCACTATCGGTGCGGGCGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATCTGACATTGGATGATGTCTTGAATGCTACAGGGCAAGTTATGGAAAAAACAAGCTATGGCACTATATATAAGGCGAAGCTTGCTGATGGAGGCACCATTGCTCTGAGATTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGTTGGGAAAGATTCGCCATGAGAACTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTCCTTATTTATGACTATCTGCCTATCAGAACTTTACATGATTTTCTACATGAATCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCCTTAGGCATCGCCCGGGGACTAGCGCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGCAACGTTAGATCAAAAAATGTGCTTGTGGATGACTTCTTTGCAGCGAGACTGACGGAGTTTGGGCTCGACAAGCTAATGATCCCATCGGTAGCTGACGAAATCGTCTCGCTTGCAAAATCAGATGGGTACAAGGCACCGGAGCTGCAACGGATGAAGAAATGCAATTCGAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAACCGGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATGGTGAAAGTGGCAGTTTTAGAGGAAACAACAATGGAGGTTTTCGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAATTGTTCAAGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCAGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACAGAAACAAGAAGTGAGATTGGTACCCCATTTTGA 2076 43.74 MAILKLFSLCIFFFLLIRAPVRCDSLHFLSSSSSSSSSSSSSSSSFSSDVQLLLGKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSTGTPLVCSDSSSPHWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCEKLVSVRLHGNSLSGSLPEPALPNSTCKNLEALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGQIPQSLGKLELEKLNLSNNNFSGILPVFSNSKFGVEAFEGNSPGLCGEPLKSCAGPSHLSSGAIAGLVIGLMSGTVVLASLLIGYMQNKKKKSMSESEDEIDEGEDEENGGTIGAGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8588162 8590724 - CePI673135_09g009070.1 Cec09g0907 211417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0907 691 Pfam Leucine Rich Repeat 142 161 IPR001611 GO:0005515(InterPro)
Cec09g0907 691 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515(InterPro)
Cec09g0907 691 MobiDBLite consensus disorder prediction 347 367 - -
Cec09g0907 691 Pfam Leucine rich repeat 217 275 IPR001611 GO:0005515(InterPro)
Cec09g0907 691 SUPERFAMILY L domain-like 63 282 - -
Cec09g0907 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 120 673 IPR052451 -
Cec09g0907 691 Gene3D Ribonuclease Inhibitor 190 309 IPR032675 -
Cec09g0907 691 SUPERFAMILY Protein kinase-like (PK-like) 396 667 IPR011009 -
Cec09g0907 691 Coils Coil 341 361 - -
Cec09g0907 691 ProSiteProfiles Protein kinase domain profile. 391 691 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0907 691 MobiDBLite consensus disorder prediction 671 691 - -
Cec09g0907 691 Gene3D Phosphorylase Kinase; domain 1 376 467 - -
Cec09g0907 691 Gene3D Transferase(Phosphotransferase) domain 1 469 684 - -
Cec09g0907 691 FunFam Leucine-rich repeat receptor-like protein kinase 215 307 - -
Cec09g0907 691 MobiDBLite consensus disorder prediction 672 691 - -
Cec09g0907 691 Gene3D Ribonuclease Inhibitor 49 189 IPR032675 -
Cec09g0907 691 Pfam Protein tyrosine and serine/threonine kinase 395 666 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0907 691 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 110 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0465 Cec-Chr1:4797820 Cec09g0907 Cec-Chr9:8588162 1.60E-43 dispersed
Cec07g1806 Cec-Chr7:33714724 Cec09g0907 Cec-Chr9:8588162 4.20E-58 dispersed
Cec09g0907 Cec-Chr9:8588162 Cec11g0278 Cec-Chr11:3025179 9.70E-59 dispersed
Cec09g0907 Cec-Chr9:8588162 Cec10g2242 Cec-Chr10:36754408 1.10E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72259 PF07714 PK_Tyr_Ser-Thr 2.80E-25 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0907 - - - 0.0