Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0957 | ATGGGGCGAAAGAAGCCTACTGCAAGGGATGATGACAGCGCCCCTGCGGCAGCCCATGGTGGTGGGAAGTCCAAGAAAAAAACGTTTGCAGTAGACGACGATGAGTACTCCATTGGAACCGAGTTGTCTGAAGAACCCCAGGTTCCGGAGGAGAAGGTCGTGATAACTGGGAAGAAGAAGGGTAAGAAAGGCAATTCAAAAGCTTCACAACTTAAAGAGGATGACGATGACGATGATGTGGACGGTGTTTCAGAAATTGTTATTACCGGGAAGAAGAAGGGCAAGTCGAAGAAGGGTGGAAGTAGCCTTGCTTTTACTGCTGCCAGTTTTGGTTTGCTTGAAGAGGAGGGAATGGATGACGATGATGAATCTGTGTTGACTGCAGAAAAGGATGATGATGAAGAGGAAGATTCTGCGATCAAGTTTTCAGGCAAGAAGAATTCATCCAAATCTTCAAAGAAGAGTGGCTTTTCTGCAGTGTCAGCATTCACTGCCCTTAATGATGAGAATGATGAGGATGTAATTGGTGATGAGGTGAGGGTTGATGAAGATATTGATGATGAGCCTGTTATTGCATTTACTGGTAAGAAGAAGTCATCAAAAGGTGGCAAGAAGGCCGGGAGTGCATTTACAGGTTTTAGTGGTCTTGACTATGAGGACGAGGACAGAGATGATGATGATAAAGATGGGGATGAAGATGTTACATCAATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCAAAGAAGGGTGGAAATTTGTTTAGTGCAGCATTAGCAGATGAGGAAAATGATGGCGATGTTTCTATTTCAGAGCCAAATAAATTGGACAATGATGGTGTTAATGAAGACGATGTCAATGTTATTGCATTTTCTGGTAAGAAAAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAATGATGAAAATGCGCAGGGCAATGAAGTTAAGGATGTAGTTGTACCTGAAATACTTAATACAGTAAGTAGCAATCTTGATTCTGATTTATCTAATGCTAACAAGATGGAAGCGGTGGCAGAGACTTCAAAAAATAAAAAGAAAAAGAAGAAAAGCGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTGGCTGAGCTAGGAGAAGGGCCTACCATATCAAAACCGGCAGACCCTCCCCTTTCTTCCCAGGAGGCCAAAGTTGAGAATGCACCTGAGCCAGTAGCTCCTCCTGAAAGGGAAGCTGAAGAAGAGAGCACAGAATCGGCTGCAGCAAGGAAGAAGAAAAAGAAGAAGGAGAAGGAAAAAGAAAAAAAGGCTGCTGCTGCTGCAGCAGCTGCTGAAGGGAATGATGAAAAAATTGAGGAGGTAAAGACTGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGCCGGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAGGAAGCAATGGCTAGAAGAAAAGAAGAAGAAGAGCGAAGGAAAAGGGAGGAGGAAGAGAGATTGAGAAAGGAAGAAGAAGAGAGACGTAGGCTAGAAGAACTCGAAAGGCAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTTTTAAGGAAGAAACAGGAAGGCAAGCTGTTAACAGGTAAACAAAAGGAAGAACAACGGAGGTTGGAGGCAATGAGGAACCAGATTTTATCAAATGCCGGAGGTTTACCTCTGTCTACATCTGACCCTAGTGCACCAGCTAGACGACCAAAATACCAGACAAAGAAGACAAAACCAGCCCATCATCAAACAAATGGAAATGCACAAACGAAGGCAGTGGAGCATACAGAAGAAAAAATACAAGAAAAAGATGTGGCGGAGACAGAAGTATTGGAGTCACAGAAGATTGCAGCTGTTGAGTTGATGCATGTGGAGGAAAAAGCAGATGTTGTTGAGGCTACAGAAGACAATGAAATTCAAGAAGATGAGGATGAGGATGAATGGGATGCGAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTCGCTGACGAGGAGCTTGAATCAGAACCTGAGAATGGCATGAAAAAAGATACAAAGAATGGTGCAGGTGCCAAGCTAGCTGCCCCTGCTCAAAAAGGTTTACCTTCTCAGTCTATAAAGTCACAAGATATTGAAAACAAAAAGAAGCAGGACGAGGTTGAGGTTGCCGACAAGGGCAAAAGAAAAGATGATGCTGTTAAGAAAAAAACTTCAGTCCCAGATGCTACTCCTGTACCACAGGAAGAAAATCTTCGCTCGCCCATATGTTGTATTATGGGTCATGTTGATACTGGTAAAACCAAGCTGCTGGACTGTATCCGTGGTACAAATGTTCAAGAGGGAGAGGCGGGAGGAATTACTCAGCAGATTGGGGCAACGTATTTTCCTGCCGAGAACATTCGGGAAAGAACTAGGGAATTGAAGGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTATTATTGATACCCCTGGGCATGAGTCGTTTACAAATTTACGTTCTCGTGGTTCGGGCTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCCTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAATACAGAATTTATTGTTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCAATTCTTAAGACGATGAAGCAGCAAACCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATTACTCAATTTAAAGAGCAGGGATTGAATACTGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACATGTTACTATTATTGGTGCAGTGGGCCCAGAAAACTATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGCACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAATGGTGTGTTGCATGAAGGAGATCAAATTGTTGTTTGTGGGATGCAGGGCCCAATTGTTACTACTATTCGAGCCCTATTGACGCCCCATCCAATGAAGGAACTCCGGGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATCAAGGATTCAGCTATGGAAGATATGAAGTCAGTCTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATATATCACTTGTTCGACCAATTCAAGGCCTATATTGATAATCTTAAGGAGGAAAAGAAGAAAGAAGCCGCTGAGGAAGCAGTTTTTCCTTGTGTTCTCAAAATTCTACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTGATTGAGGGCATTGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGAGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAACCACAAACCTGTTGATTATGCAAAGAAAGGGCAGAAGATTGCTATTAAGATAGTTGGGCACTCTTCGGAGGAGCAACAAAAGATGTATGGTAGACACTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCCATTGACCTTCTCAAAGCGAACTATCGGGATGATTTGTCCACGGATGAGTGGAGACTCGTGGTGAAATTGAAGAATCTCTTCAAGATACAGTGA | 4080 | 42.28 | MGRKKPTARDDDSAPAAAHGGGKSKKKTFAVDDDEYSIGTELSEEPQVPEEKVVITGKKKGKKGNSKASQLKEDDDDDDVDGVSEIVITGKKKGKSKKGGSSLAFTAASFGLLEEEGMDDDDESVLTAEKDDDEEEDSAIKFSGKKNSSKSSKKSGFSAVSAFTALNDENDEDVIGDEVRVDEDIDDEPVIAFTGKKKSSKGGKKAGSAFTGFSGLDYEDEDRDDDDKDGDEDVTSISFSGKKKKSAKASKKGGNLFSAALADEENDGDVSISEPNKLDNDGVNEDDVNVIAFSGKKKSSKKKSSSTFTALNDENAQGNEVKDVVVPEILNTVSSNLDSDLSNANKMEAVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTISKPADPPLSSQEAKVENAPEPVAPPEREAEEESTESAAARKKKKKKEKEKEKKAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVPEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERRRLEELERQAEEAKRRKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILSNAGGLPLSTSDPSAPARRPKYQTKKTKPAHHQTNGNAQTKAVEHTEEKIQEKDVAETEVLESQKIAAVELMHVEEKADVVEATEDNEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGMKKDTKNGAGAKLAAPAQKGLPSQSIKSQDIENKKKQDEVEVADKGKRKDDAVKKKTSVPDATPVPQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQTKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTDEWRLVVKLKNLFKIQ | 1359 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9104935 | 9116829 | + | CePI673135_09g009570.1 | Cec09g0957 | 211467 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 682 | 764 | - | - | |
Cec09g0957 | 1359 | Pfam | Elongation factor Tu domain 4 | 1229 | 1302 | IPR029459 | - | |
Cec09g0957 | 1359 | Gene3D | Translation factors | 990 | 1108 | - | - | |
Cec09g0957 | 1359 | CDD | IF2_eIF5B | 770 | 980 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 170 | 185 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 725 | 753 | - | - | |
Cec09g0957 | 1359 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1092 | 1221 | IPR036925 | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 336 | 350 | - | - | |
Cec09g0957 | 1359 | Coils | Coil | 415 | 444 | - | - | |
Cec09g0957 | 1359 | SUPERFAMILY | Translation proteins | 1226 | 1358 | IPR009000 | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 218 | 232 | - | - | |
Cec09g0957 | 1359 | PRINTS | GTP-binding elongation factor signature | 851 | 862 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | PRINTS | GTP-binding elongation factor signature | 835 | 845 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | PRINTS | GTP-binding elongation factor signature | 771 | 784 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | PRINTS | GTP-binding elongation factor signature | 887 | 896 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | NCBIfam | small GTP-binding protein domain | 772 | 898 | IPR005225 | GO:0005525(InterPro) | |
Cec09g0957 | 1359 | Coils | Coil | 478 | 545 | - | - | |
Cec09g0957 | 1359 | Pfam | Translation-initiation factor 2 | 1096 | 1208 | IPR023115 | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 683 | 701 | - | - | |
Cec09g0957 | 1359 | FunFam | Eukaryotic translation initiation factor 5B | 761 | 989 | - | - | |
Cec09g0957 | 1359 | FunFam | eukaryotic translation initiation factor 5B | 990 | 1109 | - | - | |
Cec09g0957 | 1359 | Coils | Coil | 1204 | 1224 | - | - | |
Cec09g0957 | 1359 | Gene3D | Translation factors | 1222 | 1359 | - | - | |
Cec09g0957 | 1359 | Gene3D | - | 1109 | 1215 | IPR036925 | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 363 | 378 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 114 | 136 | - | - | |
Cec09g0957 | 1359 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 417 | 1358 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER) | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 449 | 562 | - | - | |
Cec09g0957 | 1359 | Pfam | Elongation factor Tu GTP binding domain | 770 | 979 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 767 | 1058 | IPR027417 | - | |
Cec09g0957 | 1359 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 767 | 983 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g0957 | 1359 | Gene3D | - | 762 | 989 | IPR027417 | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 113 | 156 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 407 | 428 | - | - | |
Cec09g0957 | 1359 | CDD | aeIF5B_II | 991 | 1101 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Cec09g0957 | 1359 | FunFam | Eukaryotic translation initiation factor 5B | 1222 | 1359 | - | - | |
Cec09g0957 | 1359 | CDD | IF2_aeIF5B_IV | 1230 | 1325 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 270 | 284 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 646 | 670 | - | - | |
Cec09g0957 | 1359 | FunFam | Eukaryotic translation initiation factor 5B | 1109 | 1215 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 336 | 627 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 653 | 670 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 168 | 320 | - | - | |
Cec09g0957 | 1359 | MobiDBLite | consensus disorder prediction | 610 | 627 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0957 | Cec-Chr9:9104935 | Cec11g1679 | Cec-Chr11:31055613 | 1.10E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0957 | K03243 | - | csv:101204360 | 2051.17 |