Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0960 ATGCTGATGGAACCCAATTTCTCGTCGGCGAAGCCACCGCAGCCGGCGGCGATGGACATCCAACAGATGTCGGAGAATCCTCACCGTGGTTCCCACCACCGCCGCTCCCACTCCGACACTTCCTTCCGCTTCCCAAACCTCGACGAACTTCTCTTCTTCGACCCTTCAGAGCTCGACCTCTCGATGCTCTCTTCCCCTTCTTCTCCACCTCCTGGCGGCACTGCCATGGCGGTTGATTCGTCTAATGCTAAGTTTTCTGATGACGCCGTTCGCCCTAAGCCGGAGCCGATTGCCTCTGGACCATTCGGTGGTCACTTGCGGAGCTTGTCCATGGACTCTGATTTCTTCAAGAATCTGGACCTTGGTGGTGATAGTGGGGAGATCGATTCTTTGGGGAAGAAGACTCCGGCGAGTGAACAGCGGCCAGTTCGTCATCGACATAGCCTGTCCATGGATGGTTCTTCGTCGTCGTTTGAGGCCGATTCAACCCTAGTGATTGATGGAGTGAAGAAAGCAATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTAGCGAACAGACAATCTGCAGCTCGTTCGAAAGAGAGGAAAATACGGTACACGAATGAGCTGGAGAGAAAGGTTCAGACTCTGCAGTCCGAAGCTACCACTCTGTCTGCGCAGGTGACGATTCTACAGAGAGATACAAGTGGATTAACTGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAACAAGCACAACTTCGAGATGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGGCTTAGAATAGCTGCAGGCCAGGTTGCATCGATCAGCGGAAATCTTTTCAACCGACCTCCTCAATATCCTTCATCCCGGCCACCTGTACACCATTTTAGTAGCTCCCATGCCCAGCAGGGTCAACAGCAGCAGCCACCACCCATGTTGGCTACCAACCAGCAGCAGCAATCAGATCCCAAATGGACAAAGTCGTCTCAGCTTCTCAGTCGAAGTCCGGATGGCCAAGCAAAGCCTTAG 1062 52.45 MLMEPNFSSAKPPQPAAMDIQQMSENPHRGSHHRRSHSDTSFRFPNLDELLFFDPSELDLSMLSSPSSPPPGGTAMAVDSSNAKFSDDAVRPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPASEQRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGQVASISGNLFNRPPQYPSSRPPVHHFSSSHAQQGQQQQPPPMLATNQQQQSDPKWTKSSQLLSRSPDGQAKP 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9147623 9150768 + CePI673135_09g009600.1 Cec09g0960 211470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0960 353 SMART brlzneu 183 247 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0960 353 Gene3D - 186 239 - -
Cec09g0960 353 MobiDBLite consensus disorder prediction 288 353 - -
Cec09g0960 353 Pfam bZIP transcription factor 187 239 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0960 353 Coils Coil 210 230 - -
Cec09g0960 353 Coils Coil 238 258 - -
Cec09g0960 353 MobiDBLite consensus disorder prediction 1 41 - -
Cec09g0960 353 MobiDBLite consensus disorder prediction 62 81 - -
Cec09g0960 353 FunFam Transcription factor VIP1 186 239 - -
Cec09g0960 353 MobiDBLite consensus disorder prediction 126 157 - -
Cec09g0960 353 MobiDBLite consensus disorder prediction 302 347 - -
Cec09g0960 353 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 337 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec09g0960 353 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0960 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0960 353 MobiDBLite consensus disorder prediction 62 104 - -
Cec09g0960 353 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0722 Cec-Chr8:18933957 Cec09g0960 Cec-Chr9:9147623 2.40E-84 dispersed
Cec09g0960 Cec-Chr9:9147623 Cec11g1818 Cec-Chr11:32365332 3.60E-09 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30219 PF00170 bZIP_1 1.10E-07 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0960 K20557 - csv:101207973 585.874