Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0966 ATGTCGTTAGTTAGGTCATCTGATCCATCTCCATTATCATATGGAAGTCGCAAGCTTTACTCGTTGAAGGGAACAAATAATGCTCCTGACTTATCCACACAAAGATTTGGCTCTGAAAAGCATAGAACGATGTATATGAATGATACATATTGCAGTGAGAGCTATGAGAAGTATTTCCTCGACTTCCCGATAGAAGAGCCATCGATTTCAGGAATTTCTACCAATTCTTGTCACCCCAACGCTTGGGTTGATTCTCTATCCCCCTTGTGTGATTCATTTACACTTTTTGATGCTTGTCAATCAAATTCAGACTCAGCTTGCCTCGAGAGTACAAGTCCAGACCAACTTGATTTTGAGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGAGATCTGCTGGGTGACCCGGATGCTACAGATTACGATGTTGAGATGCTTGCTAACGGCCAGAGCATGGAAATTGATAGTGAATGGGCAAATTCGATTCAAGATGCACTACTTCATGACTCGCCAAAGGAATCTTCGTCGACAGATTCTAATTTCAGTACCATCAGCAGCAATAAGGATGCATCTCAGATATCTTCACAGAATCCCAGACAAATGCTTTTAGAATGTGCTTTTGCTATCTCAGAGGAGAACTTCGAAGAAGCGTCAGCGATGATAGAACAGCTCCGAGGTATGGTCTCTGTTCAGGGAGATCCCTCACAGAGGATTGCTGCGTATATGGTGGAAGGTCTTGCGGCTCGGTTGTTGGAATCAGGAAAATGTCTTTATAAAGCTTTGAGATGCAAGGAACCACCTTCCTCCGACCGTCTTGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCGTGTTTCAAATTTGGCTTTATGGCTGCAAATTGTGCCATTATTGAGGCAGCGAAAGATGAGAAGAAAATTCACATAATCGATTTTGATGTAAGCCAAGGATCTCAGTACATAAAATTGATTCAGATGCTAGCAGCTCAGTCAGGTAAGCCACCACACTTGAGGTTAACAGGGGTTGACGACCCCGAATCGGTACAGCGCCCCGTTGGAGGTCTTAGGCACATTGGACAAAGACTCGAGCAACTAGCAAAAGCACTGCGGGTTCCATTTGAATTTCGAGCGATTCCCTCAAATGCTTCTGATGTTACTCCCTCAATGCTCGCCTCCCGGCCTGGAGAAGCACTCATAGTGAACCTTGCTTTCTTGCTTCACCACATGCCAGATGAAAGCGTTTCAACCGTAAATCTACGAGACAGGCTTCTCCGTATGGTCAAGAGCTTGAACCCGAAACTAGTAACAGTTGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTTGAAGCCTATAACTACTACGCAGCTGTTTACAATTCCCTTGATGCAACACTCCCAAGAGATAGTCAAGACAGAATAAATGTAGAAAGGCAATGCTTGGCAAAGGACATAGTCAACATTGTAGCTTGTGAAGGTGAGGAAAGAGTAGAGAGATACGAAGTAGCTGGGAAATGGCGGGCAAGAATGACGATGGCAGGCTTCACTTCCTGTTCAATGAGCAAAAACGTGACCGACCCGATTCGCAAACTGATCGAGGAGTATTGTGACAGATTCAAGATGTATGAGGAAATGGGCACACTTCATTTTGGATGGGAAGATAAAAGCTTGGTTGTTACTTCGGCATGGAGGTAA 1713 44.42 MSLVRSSDPSPLSYGSRKLYSLKGTNNAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFLDFPIEEPSISGISTNSCHPNAWVDSLSPLCDSFTLFDACQSNSDSACLESTSPDQLDFEDDQVRLKLQELERDLLGDPDATDYDVEMLANGQSMEIDSEWANSIQDALLHDSPKESSSTDSNFSTISSNKDASQISSQNPRQMLLECAFAISEENFEEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKKIHIIDFDVSQGSQYIKLIQMLAAQSGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFRAIPSNASDVTPSMLASRPGEALIVNLAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYNSLDATLPRDSQDRINVERQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSKNVTDPIRKLIEEYCDRFKMYEEMGTLHFGWEDKSLVVTSAWR 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9239198 9240910 + CePI673135_09g009660.1 Cec09g0966 211476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0966 570 Pfam GRAS domain family 201 570 IPR005202 -
Cec09g0966 570 MobiDBLite consensus disorder prediction 171 198 - -
Cec09g0966 570 ProSiteProfiles GRAS family profile. 191 570 IPR005202 -
Cec09g0966 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 569 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0098 Cec-Chr1:829773 Cec09g0966 Cec-Chr9:9239198 1.20E-73 dispersed
Cec02g2110 Cec-Chr2:38678140 Cec09g0966 Cec-Chr9:9239198 5.00E-56 dispersed
Cec09g0966 Cec-Chr9:9239198 Cec10g0453 Cec-Chr10:5397401 3.10E-111 dispersed
Cec09g0966 Cec-Chr9:9239198 Cec03g0134 Cec-Chr3:1305707 1.40E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30220 PF03514 GRAS 2.30E-130 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0966 K27748 - csv:101206511 1069.68