Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0972 ATGGTGGCGCATCATAATTTAAAAAATGGGAAAGCAAGAACAAATTACCTACGCTCATGTTTGAACCAAGTTTGGATAATCCCCTGCCTCCTCACATTGCTCATTGCCATTGCTTGCACCTACACACTCCTCTTCCCAAACATCCACGAAATCCTTCAGATCTACAACTTCACCGCAACATCCCAAAGCATAAAAAGCAGTAGAAGCACCGAATCCGTCGATTGCAACGTGTTCGATGGGCAGTGGGTGGAAGACAACTCTAGGTACCCCATCTACAACTCGACGAATTGTCCCTTCGCAGAGAGAGGTTTCAGTTGCTTTGAAAATGGGCGGAAGGATAAAGAGTATTTGAGATGGCGGTGGAAGCCAAAGGAGTGTGACATCCCCAGGTTTGATGCTGGAAAAGCGTTGGAGATGTTGCGAGGGAAGCGAGTGGTGTTCGTTGGAGACTCGCAGAGTCGAACGCAGTGGGAATCGTGGATTTGCATGTTGATGGAGGGAGTGAAGAAGAAGGAAAGCGTATATGAGATCAATGGGAGTGAGATAACGAAGACGATTAGGCATTTAGGAGTGAGATTTAGAGATCATAATATCACTGTGGATTTCTATAGGTCTGTGTTCTTGATGAAGAAGGATTATAAGGTGCCTGCGGGTGCACCCACGAACGTTAGGATGATCGTTCGATTGGATCAGGTGGATGATATTAGTGATCAGTGGGTTGATTCTGATTTGTTGGTTTTTAATACAGGTGGTTGGTGGACCCAAAATCGACTTTTTAATGAGATGAGGTGTTTCTTCCGAATAAGGGACTCATTGGAACTTGGAATGTCTGTGATGGATGGGTACAAGATGGCATTAAATACTTGGGCTGATTGGACCGAAGCTAATATCAACCCCAATAGAACTACCGTTTTCTTTCGCACTATTGAATATTCTACTCATTTGAGAAGTGATGCCCATGTGGGAAATTGGGGTGACAATCCTTCTGTCCAAGATTGTGGTCATTGGTGTCTTCCCGGCTTACCTGATATTTGGAATGAAATTCTCTTATCTTATTTTCTCCCTAAAACATTCTCTTTTAGTTCCAACTAG 1092 43.86 MVAHHNLKNGKARTNYLRSCLNQVWIIPCLLTLLIAIACTYTLLFPNIHEILQIYNFTATSQSIKSSRSTESVDCNVFDGQWVEDNSRYPIYNSTNCPFAERGFSCFENGRKDKEYLRWRWKPKECDIPRFDAGKALEMLRGKRVVFVGDSQSRTQWESWICMLMEGVKKKESVYEINGSEITKTIRHLGVRFRDHNITVDFYRSVFLMKKDYKVPAGAPTNVRMIVRLDQVDDISDQWVDSDLLVFNTGGWWTQNRLFNEMRCFFRIRDSLELGMSVMDGYKMALNTWADWTEANINPNRTTVFFRTIEYSTHLRSDAHVGNWGDNPSVQDCGHWCLPGLPDIWNEILLSYFLPKTFSFSSN 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9300502 9302724 + CePI673135_09g009720.1 Cec09g0972 211482

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0972 363 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 312 351 IPR026057 GO:0016740(InterPro)
Cec09g0972 363 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 128 310 IPR026057 GO:0016740(InterPro)
Cec09g0972 363 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 312 352 IPR029962 GO:0005794(PANTHER)|GO:0016413(PANTHER)|GO:0016413(InterPro)
Cec09g0972 363 Pfam PMR5 N terminal Domain 74 127 IPR025846 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0972 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0972 Cec-Chr9:9300502 Cec11g1189 Cec-Chr11:24480778 6.00E-60 dispersed
Cec09g0971 Cec-Chr9:9296416 Cec09g0972 Cec-Chr9:9300502 4.50E-192 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1212 . . . . . . . . . . . . Car01g00885 . . . . . . . . . . . . . . . . . . Cone4ag1521 . . . . . . . . . . . . . . . . Cmo01g01032 . . . . . . Cpe02g00898 Bhi09g01514 . . . . . . Cla09g00915 Cam09g0967 Cec09g0972 Cco09g0978 . . Cre09g0936 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008701 0 1 0 0 0 2 1 2 2 1 2 2 1 1 1 1 2 1 1 2 1 1 1 3 1 2 1 1 1 0 35