Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1024 ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAAACCCAATTCATCGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTTCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGACTTCCTCTCACACCCCATCAGATTAAGATTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCAAGAGAATAACTGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACATGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCTGCGAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCTACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTCTCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTGGAAGACCTTCTATCTGTTCCACAGTAGAGGCCCGAAGCGGACATCATTTCGAACCCAGTTGCAGCTGCTCGTTAATCTTTTAACTGACAGACTGATGACTGACCTCAGTCGGGATCTCGCTGTATTAGATGTATAA 1254 44.58 MIKQAHSLIQIPNETQFIGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKICSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYMDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVLSKWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDIELEWFKHWINTFSAIELLLMNWKTFYLFHSRGPKRTSFRTQLQLLVNLLTDRLMTDLSRDLAVLDV 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9923098 9929006 + CePI673135_09g010240.1 Cec09g1024 211534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1024 417 ProSiteProfiles PTP type protein phosphatase domain profile. 118 369 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 349 IPR029021 -
Cec09g1024 417 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 57 348 IPR050348 GO:0004725(PANTHER)
Cec09g1024 417 MobiDBLite consensus disorder prediction 47 88 - -
Cec09g1024 417 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 303 340 IPR000387 GO:0016311(InterPro)
Cec09g1024 417 FunFam Tyrosine-protein phosphatase non-receptor type 12 95 366 - -
Cec09g1024 417 Pfam Protein-tyrosine phosphatase 147 350 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 ProSitePatterns Tyrosine specific protein phosphatases active site. 324 334 IPR016130 GO:0016311(InterPro)
Cec09g1024 417 PRINTS Protein tyrosine phosphatase signature 196 216 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 PRINTS Protein tyrosine phosphatase signature 178 185 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 PRINTS Protein tyrosine phosphatase signature 283 300 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 PRINTS Protein tyrosine phosphatase signature 321 339 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 SMART PTPc_3 117 405 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cec09g1024 417 SMART ptp_7 284 402 IPR003595 -
Cec09g1024 417 MobiDBLite consensus disorder prediction 66 81 - -
Cec09g1024 417 Gene3D Protein tyrosine phosphatase superfamily 94 369 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1024 - - - 0.0