Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1028 ATGGATCCTGAAGATAGTTTGTGTAGCTCTGAAGTTTGGACAAAATCTTCTTCTTTTCCTAATAATAATATTCAGCAACCAGCACAAAAATGGGCAGATGCTTCCATTTTAGACTATGCTATGGAACAACCTTTCCAAGAATTTGAAGAACGGACTGAATCGAAGGCCTCCCTAAGCTGTAACCCGAATCAACAAATTGAAATCCTTGGTAAAGATAGTAATCAGATGAATGCAGCACTTCTAGCCAGTAAAATTCAAGATTGGGATCCGAGGGCAATGCTAAATAATCTTTCTTTCCTTGAGCAGAAGATTCATCAGCTTCAGGAACTTGTGCATTTGATCATTGGTCGGAGGAGCCAAGTCTTTGGGAGGCCAGATGAACTTGTAGTTCAGCAACAGCAGCTGATAACTGCAGATCTAACTTCAATTATTGTTCAGTTAATCTCGACGGCTGGTAGTCTGCTTCCATCTGTAAAGCATAACTTGTCTGCTGCTGTTCCTGCAGTTGGGCAGCTGGAGCAGCTCGACAAAGTTCTTTTCGCGTCTGGACCCGGGACTGATAATGGTGGTGTTCAGTCACAACACGGTGATGGAACCAAACTCCCCGAGCTTCCAACCCAAGTGGACGGAAGTAGCAAGTGTGGGAAAGAACAGAACATGACTGTTGAAGAACACGAATCAAAGGATGAAGAAGACGCAGATGAAAATGAGAACCTTCCACCCGGTTCGTATGAAATATTGCAGCTAGAAAAAGAAGAGATCCTAGCACCTCACACCCACTTCTGTGCAATATGTGGAAAAGGGTTCAAGAGAGATGCAAATCTACGAATGCACATGAGGGGTCATGGTGACGAGTATAAAACTGCAGCTGCCCTTGCAAAGCCGAACAAAGAAATGGGTTCCGAGACCATGCTAATTAAGAGGTATTCCTGCCCCTTCACCGGCTGCAAGCGTAACAAGGATCATAAGAAGTTTCAGCCTTTGAAAACTATTCTGTGCGTTAAAAACCATTACAAGAGAACTCACTGTGACAAAAGCTTCACTTGCAGCAAATGCAACTCTAAGAAATTCTCAGTAATTGCTGATCTCAAAACACATGAGAAGCATTGTGGGAAAGATAAATGGCTTTGTTCTTGTGGGACTACTTTCTCTAGGAAAGACAAGCTCTTTGGACACATTGCTCTCTTCCAAGGCCACACTCCTGCAATTCCTCTCGACGAGTCGAAGGGAGCAGTCATGTCCTGTGCTCGAGGAGAACGCTATGAAACAACGAATAAGCTTGGGAGCATAAATTTCAGTTTCGGGTCGGTTGCTTCAGGAGGAAGCTCAGTTGAAACCATAGGAGATGCAAAAGGTGGTGTTGATGATCCTCTTAGTTATTTCTCACCTCTGAACTTCGATTCATGTAATTTTGGTGGCTTTCATGAGTTTCCTCGACCGCCATTCGAAAACACAGACAATGCATTTTCGTTCCTTATCCCGGCATCTAGCAATTACACCCAAAAATCTGGTGCAGAATCAAGCTCTTGA 1530 43.73 MDPEDSLCSSEVWTKSSSFPNNNIQQPAQKWADASILDYAMEQPFQEFEERTESKASLSCNPNQQIEILGKDSNQMNAALLASKIQDWDPRAMLNNLSFLEQKIHQLQELVHLIIGRRSQVFGRPDELVVQQQQLITADLTSIIVQLISTAGSLLPSVKHNLSAAVPAVGQLEQLDKVLFASGPGTDNGGVQSQHGDGTKLPELPTQVDGSSKCGKEQNMTVEEHESKDEEDADENENLPPGSYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKEMGSETMLIKRYSCPFTGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSFTCSKCNSKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLDESKGAVMSCARGERYETTNKLGSINFSFGSVASGGSSVETIGDAKGGVDDPLSYFSPLNFDSCNFGGFHEFPRPPFENTDNAFSFLIPASSNYTQKSGAESSS 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9976019 9977548 - CePI673135_09g010280.1 Cec09g1028 211538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1028 509 SMART c2h2final6 309 342 IPR013087 -
Cec09g1028 509 SMART c2h2final6 260 282 IPR013087 -
Cec09g1028 509 SMART c2h2final6 347 369 IPR013087 -
Cec09g1028 509 ProSitePatterns Zinc finger C2H2 type domain signature. 262 282 IPR013087 -
Cec09g1028 509 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 64 492 IPR044300 GO:0010044(InterPro)|GO:0010447(InterPro)
Cec09g1028 509 SUPERFAMILY beta-beta-alpha zinc fingers 258 286 IPR036236 -
Cec09g1028 509 Gene3D Classic Zinc Finger 244 315 - -
Cec09g1028 509 ProSiteProfiles Zinc finger C2H2 type domain profile. 260 287 IPR013087 -
Cec09g1028 509 MobiDBLite consensus disorder prediction 9 25 - -
Cec09g1028 509 MobiDBLite consensus disorder prediction 1 25 - -
Cec09g1028 509 MobiDBLite consensus disorder prediction 183 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1397 Cec-Chr1:28020184 Cec09g1028 Cec-Chr9:9976019 2.00E-60 dispersed
Cec04g1570 Cec-Chr4:35143169 Cec09g1028 Cec-Chr9:9976019 8.30E-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30223 None None None None Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1028 - - - 0.0