Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1054 ATGAAAACAGAAATGGCTCAAAAAACCAACTCTTCTCTCTGCTCTGTTCCACTTCTGTTTCTCCTCACTCTTCTTTTAACCCTCTCTTTCTCCCTCTTCCTCCTCTTCACTCCATCTTCCAACCCCACCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTTTCAATCCAAACATCTCTCCTTCTTCACACCAATCCATCAAAGTCTACATTGCAGACCTTCCCAGATCCCTCAACTATGGCCTTCTTGATCAGTATTGGGCCATCCAGTCCGATTCCAGGCTCGGCAGTGACGCAGATCGTGAAATTAGATCGACCCAGATGAAGAAAACCCTCGAATTCCCTCCATATCCTGAGAATCCATTGATCAAGCAGTACAGTGCGGAGTATTGGATTTTGGGGGATTTGATGACGCCACCGTCGCAGAGGGATGGATCTTTTGCGAAGAGGGTTTTTGTGGCTGAGGAAGCCGATGTGGTTTTTGTGCCATTTTTCGCGACCATGAGTGCTGAAATGCAGTTGGAAGGGGCGAAGGGTGCGTTTAGGAAGAAGGTGGGGAATGAGGACTATGAACGGCAGAGGAGTGTGATGGATTTTCTTAAGAGTACTGATGCTTGGAAGAAGTCTGGTGGGAGAGACCATGTTTTTGTTCTCACTGACCCAGTTGCGATGTGGCATGTCAAAGCTGAGATAGCCCCGGCTGTTCTGCTTGTGGTCGATTTTGGCGGTTGGTTCAGGCTTGACGCAAAATCATCTAACAGTTCCTCGCGAGATATGATTCAGCACACTCAAGTTTCAGTACTTAAGGATGTGATTGTTCCATATACCCATTTACTACCTAGGCTGCACTTATCAGAAAACAAGAAGCGCCAGACCTTACTTTATTTCAAAGGGGCGAAACATAGGCATCGGGGAGGTCTGGTAAGGGAGAAACTCTGGGACTTGCTGATTAATGAGCCTGATGTTATAATGGAAGAAGGGTTCCCGAATGCTACAGGTAAGGAGCAATCTATCAGAGGGATGAGATCATCAGAATTCTGCTTGCACCCAGCTGGGGATACCCCAACATCATGCCGTCTTTTTGACGCCATCCAAAGTCTCTGTATACCTGTGGTTGTGAGTGACAACATCGAGCTTCCATTTGAAGGCATGGTGGATTACTCAGAATTCTCTGTTTTTGTGGCTGTTAGTGATGCATTGAAACCAAACTGGCTTGCAAAGCACCTTAGAACCATACCAGAAGAGCAAAGGAACAGATTTCGGCAATATATGGCTCGGGTTCAACCTGTTTTCGAGTACGACAATGGCCATCTGGGTGGTATTGGACCAGTTCCTCCAGATGGTGCTGTAAATCACATATGGAGAAAAGTCCACCAAAAGCTGCCTATGATAAAAGAAGCCATTGCTAGGGAGAGAAGAAAACCAGAGGGTGTGTCAGTTCCTCGTCGCTGCCATTGTACTTAA 1479 46.25 MKTEMAQKTNSSLCSVPLLFLLTLLLTLSFSLFLLFTPSSNPTHSSSSSSSSSSSSSSLFNPNISPSSHQSIKVYIADLPRSLNYGLLDQYWAIQSDSRLGSDADREIRSTQMKKTLEFPPYPENPLIKQYSAEYWILGDLMTPPSQRDGSFAKRVFVAEEADVVFVPFFATMSAEMQLEGAKGAFRKKVGNEDYERQRSVMDFLKSTDAWKKSGGRDHVFVLTDPVAMWHVKAEIAPAVLLVVDFGGWFRLDAKSSNSSSRDMIQHTQVSVLKDVIVPYTHLLPRLHLSENKKRQTLLYFKGAKHRHRGGLVREKLWDLLINEPDVIMEEGFPNATGKEQSIRGMRSSEFCLHPAGDTPTSCRLFDAIQSLCIPVVVSDNIELPFEGMVDYSEFSVFVAVSDALKPNWLAKHLRTIPEEQRNRFRQYMARVQPVFEYDNGHLGGIGPVPPDGAVNHIWRKVHQKLPMIKEAIARERRKPEGVSVPRRCHCT 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10250003 10253440 + CePI673135_09g010540.1 Cec09g1054 211564

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1054 492 Pfam Exostosin family 70 412 IPR040911 -
Cec09g1054 492 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 43 464 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1054 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0977 Cec-Chr1:13162547 Cec09g1054 Cec-Chr9:10250003 1.40E-69 dispersed
Cec01g1768 Cec-Chr1:32206229 Cec09g1054 Cec-Chr9:10250003 5.40E-53 dispersed
Cec02g1528 Cec-Chr2:32858708 Cec09g1054 Cec-Chr9:10250003 3.70E-55 dispersed
Cec08g0674 Cec-Chr8:18477487 Cec09g1054 Cec-Chr9:10250003 2.50E-15 dispersed
Cec09g1054 Cec-Chr9:10250003 Cec10g0765 Cec-Chr10:11775577 2.00E-10 dispersed
Cec09g1054 Cec-Chr9:10250003 Cec08g1040 Cec-Chr8:22285993 3.90E-62 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1302 . . . . . . . . . . . Cma09g01168 . . . Cpe06g00920 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma01g00784 . Sed10g1782 . Cmo09g01168 . . . Car09g01044 . . Bhi09g01618 Tan01g2956 Cmetu01g2252 . . Mch11g1579 . Cla09g00995 Cam09g1053 Cec09g1054 Cco09g1069 . . Cre09g1017 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010824 0 1 1 3 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 1 1 2 2 32