Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1058 ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTAAGGAATACCATGACACAAAAACTTTGGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACTTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTCGATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGGTTCCTTGGAGGATCATCTTCTTGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATTGTCAAAGGAATCGCAAGAGGACTCGAATACTTGCACGAAACCGTCAGTCCTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGCACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAAGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGGATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGATGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCTCATTCATTCTACCGAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTGCAAATATGGGATACGGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAATGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGCGCATGCTGA 1926 41.64 MSWFQCCMSEERVNRNALKKSIKEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNENLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVDLVGYCADANQRILVYEYMANGSLEDHLLDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSPPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTAQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSGSELSCSYSCSTSPDRRSDIGCKNVGVEGDGRGEWARITTRGFSFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10293323 10304017 - CePI673135_09g010580.1 Cec09g1058 211568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1058 641 SMART ran_sub_2 450 641 - -
Cec09g1058 641 CDD Rab7 445 618 - -
Cec09g1058 641 Gene3D Transferase(Phosphotransferase) domain 1 155 378 - -
Cec09g1058 641 SMART rab_sub_5 445 615 - -
Cec09g1058 641 PANTHER OS07G0668900 PROTEIN 37 372 - -
Cec09g1058 641 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Cec09g1058 641 FunFam probable serine/threonine-protein kinase RLCKVII 50 154 - -
Cec09g1058 641 SMART ras_sub_4 442 615 - -
Cec09g1058 641 MobiDBLite consensus disorder prediction 363 393 - -
Cec09g1058 641 SUPERFAMILY Protein kinase-like (PK-like) 63 350 IPR011009 -
Cec09g1058 641 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1058 641 Pfam Ras family 446 612 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec09g1058 641 ProSiteProfiles small GTPase Ras family profile. 439 641 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec09g1058 641 CDD STKc_IRAK 84 353 - -
Cec09g1058 641 ProSiteProfiles small GTPase Rho family profile. 437 617 - -
Cec09g1058 641 ProSiteProfiles small GTPase Rab1 family profile. 440 641 - -
Cec09g1058 641 SMART rho_sub_3 447 615 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec09g1058 641 Gene3D - 438 625 IPR027417 -
Cec09g1058 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 619 IPR027417 -
Cec09g1058 641 FunFam Ras-related protein Rab7 437 625 - -
Cec09g1058 641 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Cec09g1058 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1058 641 PRINTS Transforming protein P21 ras signature 590 612 - -
Cec09g1058 641 PRINTS Transforming protein P21 ras signature 445 466 - -
Cec09g1058 641 PRINTS Transforming protein P21 ras signature 468 484 - -
Cec09g1058 641 PRINTS Transforming protein P21 ras signature 552 565 - -
Cec09g1058 641 PRINTS Transforming protein P21 ras signature 486 508 - -
Cec09g1058 641 MobiDBLite consensus disorder prediction 375 393 - -
Cec09g1058 641 NCBIfam small GTP-binding protein domain 445 606 IPR005225 GO:0005525(InterPro)
Cec09g1058 641 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Cec09g1058 641 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0108 Cec-Chr2:1149419 Cec09g1058 Cec-Chr9:10293323 1.00E-88 dispersed
Cec05g1625 Cec-Chr5:25606133 Cec09g1058 Cec-Chr9:10293323 5.00E-07 dispersed
Cec09g0205 Cec-Chr9:1803009 Cec09g1058 Cec-Chr9:10293323 5.90E-89 dispersed
Cec09g0320 Cec-Chr9:2659065 Cec09g1058 Cec-Chr9:10293323 1.80E-69 dispersed
Cec09g1058 Cec-Chr9:10293323 Cec10g0529 Cec-Chr10:6364338 4.90E-174 dispersed
Cec10g1755 Cec-Chr10:32243901 Cec09g1058 Cec-Chr9:10293323 2.30E-56 dispersed
Cec11g0681 Cec-Chr11:7548577 Cec09g1058 Cec-Chr9:10293323 2.80E-28 dispersed
Cec11g1819 Cec-Chr11:32379324 Cec09g1058 Cec-Chr9:10293323 3.00E-30 dispersed
Cec09g1058 Cec-Chr9:10293323 Cec05g0694 Cec-Chr5:5685097 7.40E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72263 PF00069 Pkinase 3.80E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1058 - - - 0.0