Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g1058 | ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTAAGGAATACCATGACACAAAAACTTTGGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACTTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTCGATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGGTTCCTTGGAGGATCATCTTCTTGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATTGTCAAAGGAATCGCAAGAGGACTCGAATACTTGCACGAAACCGTCAGTCCTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGCACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAAGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGGATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGATGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCTCATTCATTCTACCGAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTGCAAATATGGGATACGGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAATGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGCGCATGCTGA | 1926 | 41.64 | MSWFQCCMSEERVNRNALKKSIKEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNENLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVDLVGYCADANQRILVYEYMANGSLEDHLLDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSPPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTAQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSGSELSCSYSCSTSPDRRSDIGCKNVGVEGDGRGEWARITTRGFSFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC | 641 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10293323 | 10304017 | - | CePI673135_09g010580.1 | Cec09g1058 | 211568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g1058 | 641 | SMART | ran_sub_2 | 450 | 641 | - | - | |
Cec09g1058 | 641 | CDD | Rab7 | 445 | 618 | - | - | |
Cec09g1058 | 641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 378 | - | - | |
Cec09g1058 | 641 | SMART | rab_sub_5 | 445 | 615 | - | - | |
Cec09g1058 | 641 | PANTHER | OS07G0668900 PROTEIN | 37 | 372 | - | - | |
Cec09g1058 | 641 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524(InterPro) | |
Cec09g1058 | 641 | FunFam | probable serine/threonine-protein kinase RLCKVII | 50 | 154 | - | - | |
Cec09g1058 | 641 | SMART | ras_sub_4 | 442 | 615 | - | - | |
Cec09g1058 | 641 | MobiDBLite | consensus disorder prediction | 363 | 393 | - | - | |
Cec09g1058 | 641 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 350 | IPR011009 | - | |
Cec09g1058 | 641 | ProSiteProfiles | Protein kinase domain profile. | 78 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1058 | 641 | Pfam | Ras family | 446 | 612 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g1058 | 641 | ProSiteProfiles | small GTPase Ras family profile. | 439 | 641 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g1058 | 641 | CDD | STKc_IRAK | 84 | 353 | - | - | |
Cec09g1058 | 641 | ProSiteProfiles | small GTPase Rho family profile. | 437 | 617 | - | - | |
Cec09g1058 | 641 | ProSiteProfiles | small GTPase Rab1 family profile. | 440 | 641 | - | - | |
Cec09g1058 | 641 | SMART | rho_sub_3 | 447 | 615 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec09g1058 | 641 | Gene3D | - | 438 | 625 | IPR027417 | - | |
Cec09g1058 | 641 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 439 | 619 | IPR027417 | - | |
Cec09g1058 | 641 | FunFam | Ras-related protein Rab7 | 437 | 625 | - | - | |
Cec09g1058 | 641 | FunFam | Serine/threonine-protein kinase PBS1 | 155 | 370 | - | - | |
Cec09g1058 | 641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g1058 | 641 | PRINTS | Transforming protein P21 ras signature | 590 | 612 | - | - | |
Cec09g1058 | 641 | PRINTS | Transforming protein P21 ras signature | 445 | 466 | - | - | |
Cec09g1058 | 641 | PRINTS | Transforming protein P21 ras signature | 468 | 484 | - | - | |
Cec09g1058 | 641 | PRINTS | Transforming protein P21 ras signature | 552 | 565 | - | - | |
Cec09g1058 | 641 | PRINTS | Transforming protein P21 ras signature | 486 | 508 | - | - | |
Cec09g1058 | 641 | MobiDBLite | consensus disorder prediction | 375 | 393 | - | - | |
Cec09g1058 | 641 | NCBIfam | small GTP-binding protein domain | 445 | 606 | IPR005225 | GO:0005525(InterPro) | |
Cec09g1058 | 641 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 154 | - | - | |
Cec09g1058 | 641 | Pfam | Protein kinase domain | 79 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0108 | Cec-Chr2:1149419 | Cec09g1058 | Cec-Chr9:10293323 | 1.00E-88 | dispersed | |
Cec05g1625 | Cec-Chr5:25606133 | Cec09g1058 | Cec-Chr9:10293323 | 5.00E-07 | dispersed | |
Cec09g0205 | Cec-Chr9:1803009 | Cec09g1058 | Cec-Chr9:10293323 | 5.90E-89 | dispersed | |
Cec09g0320 | Cec-Chr9:2659065 | Cec09g1058 | Cec-Chr9:10293323 | 1.80E-69 | dispersed | |
Cec09g1058 | Cec-Chr9:10293323 | Cec10g0529 | Cec-Chr10:6364338 | 4.90E-174 | dispersed | |
Cec10g1755 | Cec-Chr10:32243901 | Cec09g1058 | Cec-Chr9:10293323 | 2.30E-56 | dispersed | |
Cec11g0681 | Cec-Chr11:7548577 | Cec09g1058 | Cec-Chr9:10293323 | 2.80E-28 | dispersed | |
Cec11g1819 | Cec-Chr11:32379324 | Cec09g1058 | Cec-Chr9:10293323 | 3.00E-30 | dispersed | |
Cec09g1058 | Cec-Chr9:10293323 | Cec05g0694 | Cec-Chr5:5685097 | 7.40E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72263 | PF00069 | Pkinase | 3.80E-46 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g1058 | - | - | - | 0.0 |