Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1068 ATGGTGAAAAGCTTACAAGGCGGAGGGCAAAACCTCCCGGCGGACGTGACGCAGGTGATTGATCAATTGGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCGTCTCCAAGCCGGCCCACTACGATCTGCAGCTCGCGAGAGAAGAAATGTCGAGGGAAAGATTGCGTTATTTGGAAGCCATGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTACCAACAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGATGTTCACGCTCTTTATCCACAACTAGGCTTGAAGAATTCGCCTCAGGTTTATGAGACCCTTGAGCACCGAATGGTTGTGGCAGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGACGGTGAAATCCAGGAGGAAGAGATTGAGAAGTTGAGTTTAGTATCTCGAAGTTCCCTTGATAGTACAAGCACGGGTGTAACAATCAGCTCAAGTGCTAATTCAACAAATTATACAAGTGCTAGCAGTACCGGAAGCATTGTGAACAATAGTCTTTCAGTAAGCTCAACTGAAACTGCAGAACCTGGAGTTGGTGGTGTTCCCAATCGCTTTCTTGGAATCACACCTGCCTTTTTATGGCAAACACAGCTCCATCAAACGCCTTCCATGGATATGGCCGAATATCAAATGGCTCTTTCCCGCGAGATTGATGCTCGTTTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTGTGATGGATGATATTGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCAGAGAGAGTCAAGTTGATCATTGAGGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGTAGACAGAAAGTTTGCTGAATATTACAATGTTCTTGAGCAGATATTGGGAGTACTAATTAAGCTTGTCAAAGATTTGAAGCTGCAGCATCAACATAAATATGACGATCTCCAGAAAACATGGCTGTGTAAAAGGTGTGAGACCATGAATGCGAAACTGAGCGTTTTAGAGCACGTTCTCCTGCTTGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTTACTCGTCTCCGCGAGTATCAAGGTGTAGACCCTCATTTCGACACAATTGCGAGGCAGTACCATGATATTGTGATGAAACTTGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAGTCAAAGAAACCCAGCACGTGGCCACTTGGACCGAACCGCCAACCTCAAGTTGAAGGCCAGTATAGTCTAGATTCATCTCCCCGTGGGGCCACATTGCCTTATCGGGTCGGGTCACGAATCAAAATACGGATCCGGGTCGCGTTAGCGTTCAATGAACGCGTCGAAGATTCCAGCTCAATCCAACGGACTGTTGCAGCCTTCCTCAAAAATCTCTATAAATACTTCCCGCTCCCTCTCACAATCATTTCATCTTTCCTTCTTTCCTCTCTTTTCACGCGTTCTTCGTTCTTTCGCCTTCTGATTTTCAGCCGTCCGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAGCAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATCCATGGGTTTTGA 1923 45.35 MVKSLQGGGQNLPADVTQVIDQLERHCLAPDGSLVSKPAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEEYQQAVSMANLGGVRDVHALYPQLGLKNSPQVYETLEHRMVVAEASQRLRLPLISKDGEIQEEEIEKLSLVSRSSLDSTSTGVTISSSANSTNYTSASSTGSIVNNSLSVSSTETAEPGVGGVPNRFLGITPAFLWQTQLHQTPSMDMAEYQMALSREIDARLKTKCDKVADAFVMDDIESSSGHHSSSARLPERVKLIIEEIEREEAALRQELYSVDRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDDLQKTWLCKRCETMNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSKKPSTWPLGPNRQPQVEGQYSLDSSPRGATLPYRVGSRIKIRIRVALAFNERVEDSSSIQRTVAAFLKNLYKYFPLPLTIISSFLLSSLFTRSSFFRLLIFSRPIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10394552 10403299 - CePI673135_09g010680.1 Cec09g1068 211578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1068 640 NCBIfam translation initiation factor SUI1 538 640 IPR005874 GO:0003743(InterPro)
Cec09g1068 640 Pfam HAUS augmin-like complex subunit 4 188 422 IPR029327 GO:0051225(InterPro)|GO:0070652(InterPro)
Cec09g1068 640 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 5 425 IPR029327 GO:0051011(PANTHER)|GO:0051225(InterPro)|GO:0051225(PANTHER)|GO:0070652(PANTHER)|GO:0070652(InterPro)
Cec09g1068 640 ProSiteProfiles Translation initiation factor SUI1 family profile. 558 628 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec09g1068 640 MobiDBLite consensus disorder prediction 151 171 - -
Cec09g1068 640 Gene3D - 534 640 - -
Cec09g1068 640 MobiDBLite consensus disorder prediction 429 456 - -
Cec09g1068 640 MobiDBLite consensus disorder prediction 435 456 - -
Cec09g1068 640 CDD eIF1_SUI1 556 639 IPR005874 GO:0003743(InterPro)
Cec09g1068 640 Coils Coil 272 292 - -
Cec09g1068 640 FunFam Eukaryotic translation initiation factor SUI1 532 640 - -
Cec09g1068 640 SUPERFAMILY eIF1-like 531 640 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec09g1068 640 Pfam Translation initiation factor SUI1 555 628 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1068 Cec-Chr9:10394552 Cec10g0514 Cec-Chr10:6199372 9.60E-53 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1068 K16587 - csv:101203307 781.941