Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g1076 | ATGGACTGGACCAGAGGCCCTGCCGTCGGCCGCGGCTCCTCCGCCACCGTCTATTTGGCCACAGCCGCCTCCTCCGGCCACCAATTCGCCGTCAAATCCACCGACCTCACTTCATCGGCGCTGTTGCAGAAGGAGCACGCTCTTCTTTCCAATTTGAGCTCCCCATATCTAATCAAGTGCTTAGGTTTCGACATTGAAACCGAAGCCTTGAATCCGCCGGTGTTCAATTTGTTCATGGAGTATTCGCCGGAGGGGACACTGTGGGATGCGATACAGAGCAACGGCGGTCGGATGGAGGAATCGACGATCGGAGTATTTTCGCGTCAGATTCTCAAAGGATTGGAGTACCTTCACGCTAATGGATTAGCACATTGCGATATCAAGAGCCGGAATCTGTTATTGAGTGATGAGGGTTTGAAAATCGCCGATCTCGGTTGTGCGAAATTTGTGGATGAAATTTCCGGTAATGGAGTTGGGGCTTTTTCTGGTTCGCCGGCGTTCATGGCGCCCGAGGTTGCGAGAGGTGAAGAACAGGGGTTTCCGGCGGATGTTTGGGCTTTTGGATGCACAGTCATTGAAATGGCTACTGGCGATCATCCATGGCCGGAGATGGAGGATCCGGTATCGGCGTTGTATCGGATTGGATTTTCCGGCGAGTTACCGGAGATCCCGCGGTGGTTGTCGAAGGGTGCGAGGGATTTTGTCGCCAAGTGTTTGATAAAAGACCCGAAAGAAAGATGGACTGTGAAACGGCTTCTTGAGCATCCGTTTCTTCAGGGATTTGATTCTGAATCGGAGATTGAATGCTCGAGGATGAAAACGATGAATTCTTCTCCGAACTGTGTTTTGGATCAGAGCTTTTGGGATTCAATGGAAGATTTGGAGACTCCATTGAAGGTGACCCATCAAGCTTCTATGGCGGGTTGTCCGGCTGAGAGGATTAGAAGTTTGGCTGGTAATTTGTCTTCTGATTGGGATTTGGAATGGGATGATCGGGATTGGGTTTTGATCAGAAACAATGGCGTCGGCGGTGGAAGCCATGAAAATGGATCTGTGAGCTCAGATATTTTTGCCTCAGTTGAAGAAGAAGAAATTTTGAACTTGGAATTTGAAGAAAATTCTGTATTGTTCTGTTTATTTGATAATGATTTTAGTGTTGTGAAGAGTAGGAATGGAGGATTAGAAATGGAATTTGAGAGTGATTTTATGTTGGAAACTGTGAGATCTGAAGTTGAAAAAAGTTTCGCCATTTCAGTCACGCCGCTACACCGGAGCTTTCTTCTTGGAGCAATTGCCCAATTCAAAGCTTCAAATCTCCGTCCACACTTCGCGGCTAGAGTTCGGGCCGGCAGTGTAGTTTCAGAGATTGTAATGGAAGCGCCGCCGTTCTCCATCGCTGTTTCTTTTTCTTCTTCTTCTTCTCAATCTGTATTTCGATCACTTTCGTCGTTGTCTTATACCAGCTCCCTCATTTGTCTTCGCAACAATCGTTACAAAGGTCGTCATCTCAAAGTCAAGTGCTCCGGTAAGTTCGCAGTTCGTGCCTCATTTGGTGGTGACTCAGTTGTGACTTTACTGGATTACGGTGCTGGTAATGTTCGTAGTGTGAGGAATGCAATTCGTTACCTTGGCTTCGACATCAAAGATGTGCAAACTCCAGAAGACATTCTAAATGCAAAACGCCTAATATTTCCTGGAGTTGGGGCATTTGCTCCTGCCATGGATGTGCTAAACAGTAAAGGCATGGCTGAAGCACTTTGCACTTATATTGAGAATGATCGCCCATTTTTAGGCATCTGTCTTGGGCTTCAACTACTCTTCGAGTCAAGCGAGGAGAATGGACCAGTAAAAGGTCTTGGCTTAATACCTGGTGTGGTTGGACGTTTTGACTCTTCCAATGGTTTTAGGGTACCCCATATTGGGTGGAATGCTTTGGAAATCTCAAAGGACTCTGAGATATTGGATGAAATTTCTAACCGTCATGTCTACTTTGTTCACTCTTACCGTGCTATGCCATCAGACAAGAACAAGGATTGGATCTCTTCTACTTGCAGCTATGGTGACAGGTTTATAGCTTCAGTTAGAAGGGGAAATGTTCATGCAGTTCAATTCCACCCAGAAAAAAGTGGAGCTGTAGGTCTGTCTGTCCTACGAAGATTCCTGTTTCCAAAGTTGTCTGTGACCAAGAAGCCTACTGAGGGAAAGGCATCAAGGCTTGCAAAAAGGGTAATTGCTTGTCTTGATGTGCGGACAAATGACCAAGGGGACCTTGTTGTTACCAAAGGGGACCAATATGATGTAAGGGAGCAGACAGAAGAGAATGAGGTGAGGAACCTTGGCAAGCCGGTAGAGCTTGCTGGACAGTACTACAAGGATGGTGCTGATGAGGTCAGTTTTCTGAATATAACTGGTTTCCGTGACTTCCCTCTTGGTGACTTGCCAATGTTGCAGGTGCTGAGATACACATCAGAAAATGTTTTTGTACCATTGACTGTTGGGGGCGGGATTAGAGATTTTAAGGATGCAAATGGCAGACACTATTCTAGCTTGGAAGTTGCTTCAGAATATTTTAGATCTGGAGCTGATAAAATATCTATTGGAAGTGATACAGTTTATGCTGCCGAAGAATATTTAAGAACTGGCGTAAAGACCGGAAAGAGCAGCTTGGAGCAGATTTCTAAGGTTTATGGAAACCAGGCTGTTGTGGTAAGTATTGATCCTCGTAGAGTGTACCTTAAAAGTCCCAATGATGTGGAGTTCAAAGTCATACGAGTAACAAACCCAGGTCCTAATGGAGAAGAGTATGCATGGTATCAATGTACAGTAAATGGAGGTCGAGAAGGTCGACCTATTGGCGCTTATGAGCTTGCAAAAGCAGTTGAGGAGCTTGGAGCTGGAGAAATACTGCTGAACTGCATAGATTGTGATGGTCAAGGAAAAGGATTTGATATAGATTTGGTAAAGCTGATATCAGATTCTGTGAGCATACCAGTTATTGCCAGCAGTGGTGCTGGCTCTCCTCACCATTTCTCTGAGGTCTTTAACAAAACGAATGCATCTGCTGCCCTCGCCGCTGGCATTTTTCATCGCAAGGAGGTGCCTATTCAGTCCGTAAAAGAGCATTTATTAAACGAAGGCATAGAAGTCAGAATCTAA | 3156 | 45.69 | MDWTRGPAVGRGSSATVYLATAASSGHQFAVKSTDLTSSALLQKEHALLSNLSSPYLIKCLGFDIETEALNPPVFNLFMEYSPEGTLWDAIQSNGGRMEESTIGVFSRQILKGLEYLHANGLAHCDIKSRNLLLSDEGLKIADLGCAKFVDEISGNGVGAFSGSPAFMAPEVARGEEQGFPADVWAFGCTVIEMATGDHPWPEMEDPVSALYRIGFSGELPEIPRWLSKGARDFVAKCLIKDPKERWTVKRLLEHPFLQGFDSESEIECSRMKTMNSSPNCVLDQSFWDSMEDLETPLKVTHQASMAGCPAERIRSLAGNLSSDWDLEWDDRDWVLIRNNGVGGGSHENGSVSSDIFASVEEEEILNLEFEENSVLFCLFDNDFSVVKSRNGGLEMEFESDFMLETVRSEVEKSFAISVTPLHRSFLLGAIAQFKASNLRPHFAARVRAGSVVSEIVMEAPPFSIAVSFSSSSSQSVFRSLSSLSYTSSLICLRNNRYKGRHLKVKCSGKFAVRASFGGDSVVTLLDYGAGNVRSVRNAIRYLGFDIKDVQTPEDILNAKRLIFPGVGAFAPAMDVLNSKGMAEALCTYIENDRPFLGICLGLQLLFESSEENGPVKGLGLIPGVVGRFDSSNGFRVPHIGWNALEISKDSEILDEISNRHVYFVHSYRAMPSDKNKDWISSTCSYGDRFIASVRRGNVHAVQFHPEKSGAVGLSVLRRFLFPKLSVTKKPTEGKASRLAKRVIACLDVRTNDQGDLVVTKGDQYDVREQTEENEVRNLGKPVELAGQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFKDANGRHYSSLEVASEYFRSGADKISIGSDTVYAAEEYLRTGVKTGKSSLEQISKVYGNQAVVVSIDPRRVYLKSPNDVEFKVIRVTNPGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLVKLISDSVSIPVIASSGAGSPHHFSEVFNKTNASAALAAGIFHRKEVPIQSVKEHLLNEGIEVRI | 1051 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10487751 | 10510654 | - | CePI673135_09g010760.1 | Cec09g1076 | 211586 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g1076 | 1051 | NCBIfam | imidazole glycerol phosphate synthase subunit HisF | 739 | 1050 | IPR004651 | GO:0000105(InterPro)|GO:0000107(InterPro) | |
Cec09g1076 | 1051 | SUPERFAMILY | Ribulose-phoshate binding barrel | 738 | 1050 | IPR011060 | - | |
Cec09g1076 | 1051 | Pfam | Histidine biosynthesis protein | 742 | 1033 | IPR006062 | GO:0000105(InterPro) | |
Cec09g1076 | 1051 | ProSiteProfiles | Protein kinase domain profile. | 3 | 258 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1076 | 1051 | Pfam | Protein kinase domain | 6 | 258 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1076 | 1051 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 309 | - | - | |
Cec09g1076 | 1051 | CDD | GATase1_IGP_Synthase | 523 | 721 | IPR010139 | GO:0000105(InterPro)|GO:0016763(InterPro) | |
Cec09g1076 | 1051 | Hamap | Imidazole glycerol phosphate synthase subunit HisH [hisH]. | 522 | 723 | IPR010139 | GO:0000105(InterPro)|GO:0016763(InterPro) | |
Cec09g1076 | 1051 | FunFam | Imidazole glycerol phosphate synthase hisHF | 518 | 743 | - | - | |
Cec09g1076 | 1051 | PANTHER | IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H | 739 | 1051 | IPR050064 | GO:0000107(PANTHER) | |
Cec09g1076 | 1051 | Gene3D | Aldolase class I | 743 | 1051 | IPR013785 | - | |
Cec09g1076 | 1051 | SUPERFAMILY | Class I glutamine amidotransferase-like | 522 | 722 | IPR029062 | - | |
Cec09g1076 | 1051 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 122 | 134 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g1076 | 1051 | CDD | HisF | 741 | 1045 | IPR004651 | GO:0000105(InterPro)|GO:0000107(InterPro) | |
Cec09g1076 | 1051 | NCBIfam | imidazole glycerol phosphate synthase subunit HisH | 523 | 721 | IPR010139 | GO:0000105(InterPro)|GO:0016763(InterPro) | |
Cec09g1076 | 1051 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 522 | 730 | - | - | |
Cec09g1076 | 1051 | SMART | serkin_6 | 3 | 258 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1076 | 1051 | Gene3D | - | 520 | 742 | IPR029062 | - | |
Cec09g1076 | 1051 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524(InterPro) | |
Cec09g1076 | 1051 | CDD | STKc_MAPKKK | 2 | 258 | - | - | |
Cec09g1076 | 1051 | FunFam | Imidazole glycerol phosphate synthase hisHF | 741 | 1051 | - | - | |
Cec09g1076 | 1051 | Pfam | Glutamine amidotransferase class-I | 525 | 720 | IPR017926 | - | |
Cec09g1076 | 1051 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 305 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0926 | Cec-Chr2:12204173 | Cec09g1076 | Cec-Chr9:10487751 | 2.30E-83 | dispersed | |
Cec04g1378 | Cec-Chr4:33426970 | Cec09g1076 | Cec-Chr9:10487751 | 7.40E-63 | dispersed | |
Cec04g1887 | Cec-Chr4:37408096 | Cec09g1076 | Cec-Chr9:10487751 | 1.60E-83 | dispersed | |
Cec09g1076 | Cec-Chr9:10487751 | Cec10g0455 | Cec-Chr10:5435455 | 1.80E-11 | dispersed | |
Cec09g1076 | Cec-Chr9:10487751 | Cec02g0212 | Cec-Chr2:2047538 | 4.80E-86 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72264 | PF00977 | His_biosynth | 2.10E-44 | CL0036 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g1076 | K01663 | - | csv:101205184 | 1093.57 |