Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1092 ATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAAGCTCAGCGTCATGGCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCAAATTTGAGATCAAAAGCTAAGCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGGGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTCATGAACAGAACAGAAGGCTTGGACAACCGAGGCCTAGTTGGTTTTCAACGACAAATTATGAGAGAGCAAGATGAAGGCCTTGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTAGCCGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGCGAGTGCAGAAGAGGCTGGCAATACTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTTGTTAAGTATTTGTAA 630 43.17 MISERSSLAASGPEAQRHGSAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKAKQMASTLNMSNFANRDSLLGPEIKPADVMNRTEGLDNRGLVGFQRQIMREQDEGLEKLEGTIISTKHIALAVNEELNLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLIAVIWLLVKYL 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10713118 10714934 + CePI673135_09g010920.1 Cec09g1092 211602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1092 209 CDD SNARE_Qc 116 173 - -
Cec09g1092 209 SUPERFAMILY SNARE fusion complex 104 175 - -
Cec09g1092 209 Pfam SNARE domain 150 200 IPR000727 -
Cec09g1092 209 FunFam syntaxin-51 isoform X2 115 177 - -
Cec09g1092 209 PANTHER SYNTAXIN 18 195 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Cec09g1092 209 MobiDBLite consensus disorder prediction 1 23 - -
Cec09g1092 209 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 113 175 IPR000727 -
Cec09g1092 209 Gene3D - 115 177 - -
Cec09g1092 209 SMART tSNARE_6 108 175 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1092 Cec-Chr9:10713118 Cec10g0467 Cec-Chr10:5606053 1.30E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1092 K08503 - csv:101208669 372.089