Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1151 ATGGCTCAGACAAGAATCATGGGTGGCAGTGAGATGAATAAATCCACGAAGGAGGAATCCAAGACAACACCTGCCACTACACAGGAACAGTCTCCAAACACAAGCACTGGTACCGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACAAGCCCCCAGGCACACACATATATGTGGGGGGTACAGCCTATTATGCCCCCTTATGGAACCCCTCCACACCCGTATGTTGCAATGTATCCTCATGGTGGCATATATGCTCATCCGCCTATGCCTCCGGGATCATATCCTTACAGTCCTTTTGCCATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATACTCCAGGCAACATGGAAGGGGAAGGTAAGCCATCTGAGCTGAAAGAAAAATTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAGCATGATAACTGGGAAGAACAATGAGCTTGGTAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGCACAAGTGAAAGAAGTGGTGCTGACTCTGAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTAATGCATGGTTCTCAGAATGAAGGACATAGTCTTGCGCATCCATTGGTGAACCAAACAATGTCCATGATACCAATTCAAGCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACCCCAACGACTTCTGCCATCCCTTCATTGTGTGGGAAGGTCCCTTCGGCTCCGGTTCCAGGAGCTGTTGCTGCTGGGTCACGGGACGGCATTCCGTCCCAACCTTGGTTACAGGATGAAAGAGAGCTGAAAAGACAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAGCTGTCTCAGCGCGCGGAAGCTTTGAAGGAAGAAAATGCGAGTCTTAGATCTGAAGTGGATAGGATTAGGAGTGAGTACGAGCAACTTCTTTCAGAAAATGCCTCTCTCAAGAGGAGGCTTGGAGAAAGTGATGGAAATGAAGATCCAAGATCTGCCAAAGCCAAAGACGGCCAAAATTTGAATAAAGGTCAACATACATCCCGGACCCAACTTGCTAAAGGAACTGACCCGTGTCGTCTCGGGACTGTTGATTCTTACGGAGGCTTCATCTTTAACCCGATCCTTATTTCGGGTGTAATTAGCGACGTTTCCGTCGTGATTCCGTCGGCCGGTGGTCTTCGGTCACCGGAACTGAGACACTGCCATGCACCTATCGATTCTAAGAGTTCCATTTCCGCTGGATTCTTTAGAGTCAAAAGGAATTGTGTTGGTGGAAAATTTGATCAATTCTTTCTCTTTGAGAAAGGAATTGTAAACAATCTTCAGTAG 1491 45.94 MAQTRIMGGSEMNKSTKEESKTTPATTQEQSPNTSTGTVNPEWSGFQAYSPIPPPGYLATSPQAHTYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPMPPGSYPYSPFAIASPNGIAEASGNTPGNMEGEGKPSELKEKLPIKRSKGSLGSLSMITGKNNELGKPSGTSANGVYSKSAESESEGTSERSGADSENDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSMIPIQASGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVPGAVAAGSRDGIPSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRSEYEQLLSENASLKRRLGESDGNEDPRSAKAKDGQNLNKGQHTSRTQLAKGTDPCRLGTVDSYGGFIFNPILISGVISDVSVVIPSAGGLRSPELRHCHAPIDSKSSISAGFFRVKRNCVGGKFDQFFLFEKGIVNNLQ 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11351286 11365167 + CePI673135_09g011510.1 Cec09g1151 211661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1151 496 MobiDBLite consensus disorder prediction 19 45 - -
Cec09g1151 496 MobiDBLite consensus disorder prediction 368 408 - -
Cec09g1151 496 MobiDBLite consensus disorder prediction 118 229 - -
Cec09g1151 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 PANTHER G-BOX-BINDING FACTOR 3-RELATED 28 396 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Cec09g1151 496 SMART brlzneu 305 369 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 Coils Coil 318 373 - -
Cec09g1151 496 MobiDBLite consensus disorder prediction 371 389 - -
Cec09g1151 496 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 MobiDBLite consensus disorder prediction 286 329 - -
Cec09g1151 496 Pfam Disordered region downstream of MFMR 140 273 - -
Cec09g1151 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 MobiDBLite consensus disorder prediction 1 47 - -
Cec09g1151 496 MobiDBLite consensus disorder prediction 391 407 - -
Cec09g1151 496 Pfam G-box binding protein MFMR 7 101 IPR012900 -
Cec09g1151 496 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g1151 496 Gene3D - 308 362 - -
Cec09g1151 496 MobiDBLite consensus disorder prediction 151 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1631 Cec-Chr4:35631489 Cec09g1151 Cec-Chr9:11351286 1.30E-30 dispersed
Cec05g0128 Cec-Chr5:1118146 Cec09g1151 Cec-Chr9:11351286 4.10E-28 transposed
Cec10g0134 Cec-Chr10:1234836 Cec09g1151 Cec-Chr9:11351286 1.40E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30231 PF16596 MFMR_assoc 8.40E-45 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1151 K09060 - csv:101214217 751.125