Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1158 ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGCTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATTTCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCTTCATCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTCCACCAGACGCCATCACTTGACCCTCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTATCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCGCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATATGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGTGTAACAAATAATCCTCATCAGAAGCCTAATTTAGAATTCACATTAGGAAGGCCAGTTTGA 1215 43.87 MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLLHHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDMDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPV 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11511445 11516077 - CePI673135_09g011580.1 Cec09g1158 211668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1158 404 Gene3D - 216 273 - -
Cec09g1158 404 MobiDBLite consensus disorder prediction 11 32 - -
Cec09g1158 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 270 IPR006447 GO:0003677(InterPro)
Cec09g1158 404 MobiDBLite consensus disorder prediction 49 68 - -
Cec09g1158 404 MobiDBLite consensus disorder prediction 1 32 - -
Cec09g1158 404 MobiDBLite consensus disorder prediction 352 372 - -
Cec09g1158 404 Pfam Myb-like DNA-binding domain 218 269 IPR001005 -
Cec09g1158 404 SUPERFAMILY Homeodomain-like 214 270 IPR009057 -
Cec09g1158 404 FunFam Myb family transcription factor 215 273 - -
Cec09g1158 404 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 91 403 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2157 Cec-Chr5:33201864 Cec09g1158 Cec-Chr9:11511445 2.10E-30 dispersed
Cec08g1594 Cec-Chr8:27456395 Cec09g1158 Cec-Chr9:11511445 2.30E-32 dispersed
Cec09g1158 Cec-Chr9:11511445 Cec11g0075 Cec-Chr11:905544 4.10E-17 dispersed
Cec01g0881 Cec-Chr1:10215486 Cec09g1158 Cec-Chr9:11511445 5.60E-34 transposed
Cec05g1231 Cec-Chr5:11400758 Cec09g1158 Cec-Chr9:11511445 3.30E-44 transposed
Cec10g0139 Cec-Chr10:1332610 Cec09g1158 Cec-Chr9:11511445 4.30E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30233 None None None None Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1158 - - - 0.0