Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g1166 | ATGAGAAACCATGGGAATACAGTTTCATATGATCATGAAGAAGAAAATGAAGATGAAGTTAGTATGAAGAAGAGGAAGGATGATGAAGAAGAAGAAGAAGATGATGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGCAGCAAAATAAAGTTGCTTTTTATAAACTCTTTGCTTTTGCTGATTTTTATGATTATTTTCTCATGAGTTTTGGTTCTATTGGAGCTTGTATCCATGGTGCTTCTGTTCCTGTCTTCTTCATTTTCTTTGGAAAACTCATTAATATCATTGGCATGGCTTATCTTTTCCCTGAAGATGCTGCTCCCAAAGTTGCTAAGTACTCTTTGGATTTTCTATATCTCAGTGTGGTTATACTATTTTCATCATGGGCAGAGGTGGCTTGTTGGATGCATAGTGGAGAGAGGCAAGCAGCAAAGATGAGAATGGCTTATTTAAAATCAATGTTAAATCAAGACATTAGCCTTTTTGACACTGAAGCTTCAACTGGTGAAGTCATTGCTGCTATTACTAGTGACATTGTTATTGTTCAAGATGCCATTTCTGAGAAAGTAGGGAACTTTTTGCATTATATAAGCCGGTTTATATCAGGGTTTATTATCGGATTTGTGAGGGTATGGCAGATCAGTCTTGTCACATTATCTATTGTCCCTTTGATTGCCCTTGCTGGTGGTCTCTATGCATTTGTCACCATTGGTCTTATTGCCAAAGTAAGAAAATCTTATGTCAAGGCTGGTGAGATTGCTGAAGAGATTTTAGGAAATGTAAGAACAGTTCAAGCCTTTGCTGGGGAAGAAAGAGCAGTAAATTTATACAAAGGAGCTCTCAAGAATACCTACAAGTATGGTAGAAAAGCAGGGCTGGCTAAGGGACTGGGCCTGGGATCAATGCATTGTGTCCTTTTCTTGTCATGGGCTCTGCTAGTTTGGTTTACCAGCATTGTTGTCCACAAGGGCATTGCCAATGGTGGAGACTCCTTCACCACAATGCTTAATGTTGTCATTTCTGGCTTGTCACTTGGGCAGGCCGCACCAGACATTTCCGCCTTTGTTCGAGCAAAAGCAGCAGCATATCCTATTTTTCAGATGATAGAGAGGAACACAGTTAGCAAAAGCAGCTCCAAAACTGGCCGGAAACTGAATAAGCTTGATGGTCATATTCAATTCAAGGATGTTAATTTCAGCTACCCATCTCGTTTGGATGTAATTATATTTAATAAGTTATCTCTTGATATTCCTGCGGGCAAGATTGTAGCTCTTGTGGGAGGAAGTGGATCAGGAAAGAGCACGGTGATATCTTTGATTGAACGATTCTATGAACCCCTTTCTGGAGAGATTCTATTGGATGGTAATAACATCAAGGAGCTCGATCTCAAGTGGCTAAGGCAGCAAATTGGTTTGGTCAATCAAGAGCCTGCCCTCTTTGCTACAAGCATTAGGGAGAACATTCTATATGGAAAAGATGATGCTACCCTTGAGGACATAACGCGTGCAGCCAAACTTTCTGAGGCTTTATCATTTATAAACAATCTCCCTGAAAGATTTGAAACTCAGGTTGGTGAGAGAGGGGTCCAATTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCAATCGTTAAAAATCCATCAATCTTGTTGCTCGATGAGGCAACAAGTGCACTAGATGCAGAATCTGAAAAGAGTGTACAAGAGGCACTCGATCGCGTCATGGTTGGTCGAACGACTGTAGTGGTGGCTCATCGTTTATCTACCATACGGAATGCAGATGTGATTGCTGTCGTTCAAGAAGGAAAGATAGTTGAAACCGGAAGCCATGATGAGCTCATTTCAAAGCCAGACAGTGTCTATGCATCACTTGTCCAGTTCCAAGAAACATCATCTCTGCAACACCATCCCTCGATTGGGCAGTTGGGTCGACCACCTAGTATAAAGTACTCTCGAGAATTATCTCGCACTACAACGAGCTTTGGTGCAAGTTTTCGCTCCGAGAAAGAATCTCTTGGACGGATTGGAGTTGATGGAATGGAAATGGAGAAACCAAAGCATGTTTCAGCAAGAAGACTTTACTCCATGGTTGGACCGGATTGGATGTATGGCATTGTCGGCGTCATTGGAGCATTCGTTACAGGATCCCAGATGCCCCTTTTTGCTCTTGGGGTCTCTCAGGCTCTTGTTGCATTTTACATGGACTGGAATACAACTCAACATGAGATCAAGAAAATTTCTTTGCTTTTCTGTGGCGGTGCGGTTTTAACTGTCATTTTTCATGCAGTTGAGCATCTTTGTTTTGGAATTATGGGAGAGCGACTTACTCTTCGAGTTCGAGAAAAGATGTTCCATGCTATTCTGAGAAACGAGATAGGATGGTTCGATGATATGAACAACACAAGTTCTATGCTTTCATCACGTCTAGAAACTGATGCAACTTTATTACGAACTATCGTTGTCGACCGCTCTACAATTCTTCTGCAGAATCTAGCTTTGGTCGTTGCATCGTTCATCATTGCTTTCATTTTGAATTGGAGAATCACTCTAGTTGTCCTGGCCACTTATCCATTGATCATTAGCGGTCACATTAGCGAGAAACTTTTTATGCAAGGCTACGGTGGAAATTTGAGCAAAGCATACCTGAAAGCCAATACACTGGCCGGTGAGGCAGTTGGCAACATTAGGACTGTTGCTGCATTTTGTTCTGAGCAGAAGGTCCTTGATCTATATGCTAAGGAGCTCGTTGAGCCCTCGAGACGTTCGCTTAAAAGTGGACAGATTGCTGGAATATTTTATGGTGTCTCCCAGTTCTTCATCTTTTCATCTTACGGTCTAGCCTTGTGGTACGGTTCGGTCTTGATGGGACAGGGGCTTGCTAGCTTCAAATCTGTTATGAAATCATTCATGGTTTTGATAGTAACTGCCTTAGCAATGGGTGAAACTTTGGCATTGGCCCCTGACCTTTTAAAGGGAAACCAGATGGTGGCATCCGTGTTTGAGGTGATGGATCGACAGACAGAGGTGTCGGGTGATGTTGGTGAAGAGCTAAATGTGGTGGAGGGTACCATTGAGCTGAGGAGTGTTGAGTTCAGCTATCCATCAAGACCAGATGTTTTGATCTTCAAAGATTTCAATCTTAAAGTGAGAGCTGGCAAGAGTATAGCCTTAGTTGGGCAAAGCGGTTCGGGGAAAAGCTCGGTTCTAGCTCTTATACTGCGATTTTACGATCCAATTGCTGGGAAGGTGATGATTGATGGAAAAGATATTAAAAAACTGAAGCTCAAATCTCTCAGAAAGCACATCGGCCTTGTCCAACAGGAACCGGCTCTTTTTGCCACGTCAATTTACGAGAACATTCTTTATGGGAAAGAAGGAGCTTCAGAAGCCGAAGTATTCGAAGCAGCGAAACTCGCCAATGCTCATAACTTCATCAGTGCTCTTCCTGAAGGCTACTCAACAAAAGTCGGGGAAAGAGGGATCCAACTTTCGGGTGGCCAACGACAGAGGATCGCCATTGCAAGAGCAGTCCTGAAGAACCCGGAAATACTACTACTCGACGAAGCTACGAGTGCTCTCGACGTCGAATCGGAACGTGTGGTTCAGCAAGCCTTAGACAGATTGATGATGAACAGAACAACTGTGGTGGTTGCACATAGGCTGTCTACCATCAAAAACTGTGACCAAATCTCAGTGATTCAAGATGGGAAGATTGTAGAACAAGGAACTCATTCAAGCCTTTCCGACAACAAAAATGGAGCTTATTACAAGTTAATCAACATCCAACAACAGCAACAAAGACAGTGA | 3819 | 42.52 | MRNHGNTVSYDHEEENEDEVSMKKRKDDEEEEEDDGKKKKKKKKKKKEQQNKVAFYKLFAFADFYDYFLMSFGSIGACIHGASVPVFFIFFGKLINIIGMAYLFPEDAAPKVAKYSLDFLYLSVVILFSSWAEVACWMHSGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVIAAITSDIVIVQDAISEKVGNFLHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGGLYAFVTIGLIAKVRKSYVKAGEIAEEILGNVRTVQAFAGEERAVNLYKGALKNTYKYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKGIANGGDSFTTMLNVVISGLSLGQAAPDISAFVRAKAAAYPIFQMIERNTVSKSSSKTGRKLNKLDGHIQFKDVNFSYPSRLDVIIFNKLSLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEDITRAAKLSEALSFINNLPERFETQVGERGVQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQEGKIVETGSHDELISKPDSVYASLVQFQETSSLQHHPSIGQLGRPPSIKYSRELSRTTTSFGASFRSEKESLGRIGVDGMEMEKPKHVSARRLYSMVGPDWMYGIVGVIGAFVTGSQMPLFALGVSQALVAFYMDWNTTQHEIKKISLLFCGGAVLTVIFHAVEHLCFGIMGERLTLRVREKMFHAILRNEIGWFDDMNNTSSMLSSRLETDATLLRTIVVDRSTILLQNLALVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMQGYGGNLSKAYLKANTLAGEAVGNIRTVAAFCSEQKVLDLYAKELVEPSRRSLKSGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGQGLASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRQTEVSGDVGEELNVVEGTIELRSVEFSYPSRPDVLIFKDFNLKVRAGKSIALVGQSGSGKSSVLALILRFYDPIAGKVMIDGKDIKKLKLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVFEAAKLANAHNFISALPEGYSTKVGERGIQLSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMMNRTTVVVAHRLSTIKNCDQISVIQDGKIVEQGTHSSLSDNKNGAYYKLINIQQQQQRQ | 1272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 11706055 | 11714825 | + | CePI673135_09g011660.1 | Cec09g1166 | 211676 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g1166 | 1272 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 698 | 1013 | - | - | |
| Cec09g1166 | 1272 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Cec09g1166 | 1272 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 386 | 632 | IPR027417 | - | |
| Cec09g1166 | 1272 | Pfam | ABC transporter | 413 | 561 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Cec09g1166 | 1272 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 709 | 995 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cec09g1166 | 1272 | SMART | AAA_5 | 1055 | 1227 | IPR003593 | GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | SMART | AAA_5 | 421 | 613 | IPR003593 | GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | CDD | ABC_MTABC3_MDL1_MDL2 | 394 | 632 | - | - | |
| Cec09g1166 | 1272 | Gene3D | - | 1019 | 1272 | IPR027417 | - | |
| Cec09g1166 | 1272 | Pfam | ABC transporter transmembrane region | 75 | 342 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cec09g1166 | 1272 | Pfam | ABC transporter transmembrane region | 709 | 980 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cec09g1166 | 1272 | Gene3D | ABC transporter type 1, transmembrane domain | 9 | 104 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cec09g1166 | 1272 | Gene3D | ABC transporter type 1, transmembrane domain | 119 | 998 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cec09g1166 | 1272 | SUPERFAMILY | ABC transporter transmembrane region | 58 | 364 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cec09g1166 | 1272 | PANTHER | ABC TRANSPORTER B FAMILY | 18 | 655 | IPR039421 | GO:0005887(PANTHER)|GO:0042626(PANTHER) | |
| Cec09g1166 | 1272 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 70 | 367 | - | - | |
| Cec09g1166 | 1272 | FunFam | ABC transporter B family member 4 | 1018 | 1271 | - | - | |
| Cec09g1166 | 1272 | Pfam | ABC transporter | 1047 | 1195 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | Coils | Coil | 12 | 46 | - | - | |
| Cec09g1166 | 1272 | ProSitePatterns | ABC transporters family signature. | 533 | 547 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | CDD | ABC_MTABC3_MDL1_MDL2 | 1028 | 1263 | - | - | |
| Cec09g1166 | 1272 | ProSitePatterns | ABC transporters family signature. | 1167 | 1181 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 394 | 630 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 72 | 359 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cec09g1166 | 1272 | FunFam | ABC transporter B family member 19 | 384 | 633 | - | - | |
| Cec09g1166 | 1272 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1028 | 1264 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cec09g1166 | 1272 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1022 | 1266 | IPR027417 | - | |
| Cec09g1166 | 1272 | SUPERFAMILY | ABC transporter transmembrane region | 687 | 1009 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cec09g1166 | 1272 | Gene3D | - | 392 | 645 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0827 | Cec-Chr2:9895773 | Cec09g1166 | Cec-Chr9:11706055 | 2.50E-87 | dispersed | |
| Cec02g1988 | Cec-Chr2:37725329 | Cec09g1166 | Cec-Chr9:11706055 | 8.70E-61 | dispersed | |
| Cec06g0119 | Cec-Chr6:1155338 | Cec09g1166 | Cec-Chr9:11706055 | 1.10E-12 | dispersed | |
| Cec06g1595 | Cec-Chr6:29517781 | Cec09g1166 | Cec-Chr9:11706055 | 3.60E-32 | dispersed | |
| Cec09g1166 | Cec-Chr9:11706055 | Cec09g1942 | Cec-Chr9:36373206 | 0.00E+00 | dispersed | |
| Cec09g1166 | Cec-Chr9:11706055 | Cec10g2019 | Cec-Chr10:34968895 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g1166 | K05658 | - | csv:101219304 | 2264.19 |