Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1166 ATGAGAAACCATGGGAATACAGTTTCATATGATCATGAAGAAGAAAATGAAGATGAAGTTAGTATGAAGAAGAGGAAGGATGATGAAGAAGAAGAAGAAGATGATGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGCAGCAAAATAAAGTTGCTTTTTATAAACTCTTTGCTTTTGCTGATTTTTATGATTATTTTCTCATGAGTTTTGGTTCTATTGGAGCTTGTATCCATGGTGCTTCTGTTCCTGTCTTCTTCATTTTCTTTGGAAAACTCATTAATATCATTGGCATGGCTTATCTTTTCCCTGAAGATGCTGCTCCCAAAGTTGCTAAGTACTCTTTGGATTTTCTATATCTCAGTGTGGTTATACTATTTTCATCATGGGCAGAGGTGGCTTGTTGGATGCATAGTGGAGAGAGGCAAGCAGCAAAGATGAGAATGGCTTATTTAAAATCAATGTTAAATCAAGACATTAGCCTTTTTGACACTGAAGCTTCAACTGGTGAAGTCATTGCTGCTATTACTAGTGACATTGTTATTGTTCAAGATGCCATTTCTGAGAAAGTAGGGAACTTTTTGCATTATATAAGCCGGTTTATATCAGGGTTTATTATCGGATTTGTGAGGGTATGGCAGATCAGTCTTGTCACATTATCTATTGTCCCTTTGATTGCCCTTGCTGGTGGTCTCTATGCATTTGTCACCATTGGTCTTATTGCCAAAGTAAGAAAATCTTATGTCAAGGCTGGTGAGATTGCTGAAGAGATTTTAGGAAATGTAAGAACAGTTCAAGCCTTTGCTGGGGAAGAAAGAGCAGTAAATTTATACAAAGGAGCTCTCAAGAATACCTACAAGTATGGTAGAAAAGCAGGGCTGGCTAAGGGACTGGGCCTGGGATCAATGCATTGTGTCCTTTTCTTGTCATGGGCTCTGCTAGTTTGGTTTACCAGCATTGTTGTCCACAAGGGCATTGCCAATGGTGGAGACTCCTTCACCACAATGCTTAATGTTGTCATTTCTGGCTTGTCACTTGGGCAGGCCGCACCAGACATTTCCGCCTTTGTTCGAGCAAAAGCAGCAGCATATCCTATTTTTCAGATGATAGAGAGGAACACAGTTAGCAAAAGCAGCTCCAAAACTGGCCGGAAACTGAATAAGCTTGATGGTCATATTCAATTCAAGGATGTTAATTTCAGCTACCCATCTCGTTTGGATGTAATTATATTTAATAAGTTATCTCTTGATATTCCTGCGGGCAAGATTGTAGCTCTTGTGGGAGGAAGTGGATCAGGAAAGAGCACGGTGATATCTTTGATTGAACGATTCTATGAACCCCTTTCTGGAGAGATTCTATTGGATGGTAATAACATCAAGGAGCTCGATCTCAAGTGGCTAAGGCAGCAAATTGGTTTGGTCAATCAAGAGCCTGCCCTCTTTGCTACAAGCATTAGGGAGAACATTCTATATGGAAAAGATGATGCTACCCTTGAGGACATAACGCGTGCAGCCAAACTTTCTGAGGCTTTATCATTTATAAACAATCTCCCTGAAAGATTTGAAACTCAGGTTGGTGAGAGAGGGGTCCAATTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCAATCGTTAAAAATCCATCAATCTTGTTGCTCGATGAGGCAACAAGTGCACTAGATGCAGAATCTGAAAAGAGTGTACAAGAGGCACTCGATCGCGTCATGGTTGGTCGAACGACTGTAGTGGTGGCTCATCGTTTATCTACCATACGGAATGCAGATGTGATTGCTGTCGTTCAAGAAGGAAAGATAGTTGAAACCGGAAGCCATGATGAGCTCATTTCAAAGCCAGACAGTGTCTATGCATCACTTGTCCAGTTCCAAGAAACATCATCTCTGCAACACCATCCCTCGATTGGGCAGTTGGGTCGACCACCTAGTATAAAGTACTCTCGAGAATTATCTCGCACTACAACGAGCTTTGGTGCAAGTTTTCGCTCCGAGAAAGAATCTCTTGGACGGATTGGAGTTGATGGAATGGAAATGGAGAAACCAAAGCATGTTTCAGCAAGAAGACTTTACTCCATGGTTGGACCGGATTGGATGTATGGCATTGTCGGCGTCATTGGAGCATTCGTTACAGGATCCCAGATGCCCCTTTTTGCTCTTGGGGTCTCTCAGGCTCTTGTTGCATTTTACATGGACTGGAATACAACTCAACATGAGATCAAGAAAATTTCTTTGCTTTTCTGTGGCGGTGCGGTTTTAACTGTCATTTTTCATGCAGTTGAGCATCTTTGTTTTGGAATTATGGGAGAGCGACTTACTCTTCGAGTTCGAGAAAAGATGTTCCATGCTATTCTGAGAAACGAGATAGGATGGTTCGATGATATGAACAACACAAGTTCTATGCTTTCATCACGTCTAGAAACTGATGCAACTTTATTACGAACTATCGTTGTCGACCGCTCTACAATTCTTCTGCAGAATCTAGCTTTGGTCGTTGCATCGTTCATCATTGCTTTCATTTTGAATTGGAGAATCACTCTAGTTGTCCTGGCCACTTATCCATTGATCATTAGCGGTCACATTAGCGAGAAACTTTTTATGCAAGGCTACGGTGGAAATTTGAGCAAAGCATACCTGAAAGCCAATACACTGGCCGGTGAGGCAGTTGGCAACATTAGGACTGTTGCTGCATTTTGTTCTGAGCAGAAGGTCCTTGATCTATATGCTAAGGAGCTCGTTGAGCCCTCGAGACGTTCGCTTAAAAGTGGACAGATTGCTGGAATATTTTATGGTGTCTCCCAGTTCTTCATCTTTTCATCTTACGGTCTAGCCTTGTGGTACGGTTCGGTCTTGATGGGACAGGGGCTTGCTAGCTTCAAATCTGTTATGAAATCATTCATGGTTTTGATAGTAACTGCCTTAGCAATGGGTGAAACTTTGGCATTGGCCCCTGACCTTTTAAAGGGAAACCAGATGGTGGCATCCGTGTTTGAGGTGATGGATCGACAGACAGAGGTGTCGGGTGATGTTGGTGAAGAGCTAAATGTGGTGGAGGGTACCATTGAGCTGAGGAGTGTTGAGTTCAGCTATCCATCAAGACCAGATGTTTTGATCTTCAAAGATTTCAATCTTAAAGTGAGAGCTGGCAAGAGTATAGCCTTAGTTGGGCAAAGCGGTTCGGGGAAAAGCTCGGTTCTAGCTCTTATACTGCGATTTTACGATCCAATTGCTGGGAAGGTGATGATTGATGGAAAAGATATTAAAAAACTGAAGCTCAAATCTCTCAGAAAGCACATCGGCCTTGTCCAACAGGAACCGGCTCTTTTTGCCACGTCAATTTACGAGAACATTCTTTATGGGAAAGAAGGAGCTTCAGAAGCCGAAGTATTCGAAGCAGCGAAACTCGCCAATGCTCATAACTTCATCAGTGCTCTTCCTGAAGGCTACTCAACAAAAGTCGGGGAAAGAGGGATCCAACTTTCGGGTGGCCAACGACAGAGGATCGCCATTGCAAGAGCAGTCCTGAAGAACCCGGAAATACTACTACTCGACGAAGCTACGAGTGCTCTCGACGTCGAATCGGAACGTGTGGTTCAGCAAGCCTTAGACAGATTGATGATGAACAGAACAACTGTGGTGGTTGCACATAGGCTGTCTACCATCAAAAACTGTGACCAAATCTCAGTGATTCAAGATGGGAAGATTGTAGAACAAGGAACTCATTCAAGCCTTTCCGACAACAAAAATGGAGCTTATTACAAGTTAATCAACATCCAACAACAGCAACAAAGACAGTGA 3819 42.52 MRNHGNTVSYDHEEENEDEVSMKKRKDDEEEEEDDGKKKKKKKKKKKEQQNKVAFYKLFAFADFYDYFLMSFGSIGACIHGASVPVFFIFFGKLINIIGMAYLFPEDAAPKVAKYSLDFLYLSVVILFSSWAEVACWMHSGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVIAAITSDIVIVQDAISEKVGNFLHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGGLYAFVTIGLIAKVRKSYVKAGEIAEEILGNVRTVQAFAGEERAVNLYKGALKNTYKYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKGIANGGDSFTTMLNVVISGLSLGQAAPDISAFVRAKAAAYPIFQMIERNTVSKSSSKTGRKLNKLDGHIQFKDVNFSYPSRLDVIIFNKLSLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEDITRAAKLSEALSFINNLPERFETQVGERGVQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQEGKIVETGSHDELISKPDSVYASLVQFQETSSLQHHPSIGQLGRPPSIKYSRELSRTTTSFGASFRSEKESLGRIGVDGMEMEKPKHVSARRLYSMVGPDWMYGIVGVIGAFVTGSQMPLFALGVSQALVAFYMDWNTTQHEIKKISLLFCGGAVLTVIFHAVEHLCFGIMGERLTLRVREKMFHAILRNEIGWFDDMNNTSSMLSSRLETDATLLRTIVVDRSTILLQNLALVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMQGYGGNLSKAYLKANTLAGEAVGNIRTVAAFCSEQKVLDLYAKELVEPSRRSLKSGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGQGLASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRQTEVSGDVGEELNVVEGTIELRSVEFSYPSRPDVLIFKDFNLKVRAGKSIALVGQSGSGKSSVLALILRFYDPIAGKVMIDGKDIKKLKLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVFEAAKLANAHNFISALPEGYSTKVGERGIQLSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMMNRTTVVVAHRLSTIKNCDQISVIQDGKIVEQGTHSSLSDNKNGAYYKLINIQQQQQRQ 1272
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 11706055 11714825 + CePI673135_09g011660.1 Cec09g1166 211676
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1166 1272 CDD ABC_6TM_Pgp_ABCB1_D2_like 698 1013 - -
Cec09g1166 1272 MobiDBLite consensus disorder prediction 1 38 - -
Cec09g1166 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 632 IPR027417 -
Cec09g1166 1272 Pfam ABC transporter 413 561 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 MobiDBLite consensus disorder prediction 1 44 - -
Cec09g1166 1272 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 709 995 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1166 1272 SMART AAA_5 1055 1227 IPR003593 GO:0016887(InterPro)
Cec09g1166 1272 SMART AAA_5 421 613 IPR003593 GO:0016887(InterPro)
Cec09g1166 1272 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Cec09g1166 1272 Gene3D - 1019 1272 IPR027417 -
Cec09g1166 1272 Pfam ABC transporter transmembrane region 75 342 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1166 1272 Pfam ABC transporter transmembrane region 709 980 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1166 1272 Gene3D ABC transporter type 1, transmembrane domain 9 104 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1166 1272 Gene3D ABC transporter type 1, transmembrane domain 119 998 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1166 1272 SUPERFAMILY ABC transporter transmembrane region 58 364 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1166 1272 PANTHER ABC TRANSPORTER B FAMILY 18 655 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Cec09g1166 1272 CDD ABC_6TM_Pgp_ABCB1_D1_like 70 367 - -
Cec09g1166 1272 FunFam ABC transporter B family member 4 1018 1271 - -
Cec09g1166 1272 Pfam ABC transporter 1047 1195 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 Coils Coil 12 46 - -
Cec09g1166 1272 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 CDD ABC_MTABC3_MDL1_MDL2 1028 1263 - -
Cec09g1166 1272 ProSitePatterns ABC transporters family signature. 1167 1181 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 359 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1166 1272 FunFam ABC transporter B family member 19 384 633 - -
Cec09g1166 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1264 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1166 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1266 IPR027417 -
Cec09g1166 1272 SUPERFAMILY ABC transporter transmembrane region 687 1009 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1166 1272 Gene3D - 392 645 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0827 Cec-Chr2:9895773 Cec09g1166 Cec-Chr9:11706055 2.50E-87 dispersed
Cec02g1988 Cec-Chr2:37725329 Cec09g1166 Cec-Chr9:11706055 8.70E-61 dispersed
Cec06g0119 Cec-Chr6:1155338 Cec09g1166 Cec-Chr9:11706055 1.10E-12 dispersed
Cec06g1595 Cec-Chr6:29517781 Cec09g1166 Cec-Chr9:11706055 3.60E-32 dispersed
Cec09g1166 Cec-Chr9:11706055 Cec09g1942 Cec-Chr9:36373206 0.00E+00 dispersed
Cec09g1166 Cec-Chr9:11706055 Cec10g2019 Cec-Chr10:34968895 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1166 K05658 - csv:101219304 2264.19