Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1173 ATGAGTCTTGATGCTCTTTCTTCCAATGACTTGTTCAACTTCATCATCTACGACACGATCTCCGCAACACCGAACACCGAACACGCCCTCCGCGACTCATCGGAGAATACTTTTCTCTCCGACGACAAGTGTTCGAAACCCTACTCAAGAAAACGCCGTCCGAGTGAGGGAGACAGTAACCGAGCGACACCGTCATCAACAACGACGACGCAACAAGGGAAGAAGAAAAGGAAGAGAAAAGCAAAGGTTTGCAAGAACAAAGAGGAAGCTGAAACACAAAGAATGACACACATTGCTGTTGAAAGGAACCGCCGTAAACAAATGAATGAACATCTTTCAGTCTTACGTTCCCTCATGCCCGAATCCTATGTTCAAAGGGGTGACCAAGCATCCATAGTAGGTGGTGCAGTTGAGTTTGTGAAGGAATTGGAGCATCTTCTATCAACTTTAGAAGCCAAGAAGCTACAAATCTTACAACAAGAAGTAGATCATCATCAAGAACAAGAGATTAATGAAGATTCAAGAATGAGAATGAATGATAATAATAGTAATAAGTTGTTTTCATTTGCAAGTTTGTTGATGCATAATTCAGATCAAAATAACTATTGCTCCCAATACTCAACCAAATACACATCAAAATCCAAGGCTTCTTCAGCTGACATTGAAGTCACTTTGATTGAAACTCATGCAAACCTTAGAATCCTCTCAACAAGAAGCCATAGACAACTCTTGAAACTCATTGCTGGCTTGCAAGCTCTTCGTCTCACTATTCTTCATCTCAATCTCACTGATTTCCATCCATTGGTTCTTTACTCCATTAGCCTCAAGGTTGAAGAAGGATGCCAACTGAGATCAGTAGATGACATAGCAGCAGCAGCACATCATATGGTGAGAATAATTGAGGAAGAAGCTGTTTTGTGTTAA 924 41.13 MSLDALSSNDLFNFIIYDTISATPNTEHALRDSSENTFLSDDKCSKPYSRKRRPSEGDSNRATPSSTTTTQQGKKKRKRKAKVCKNKEEAETQRMTHIAVERNRRKQMNEHLSVLRSLMPESYVQRGDQASIVGGAVEFVKELEHLLSTLEAKKLQILQQEVDHHQEQEINEDSRMRMNDNNSNKLFSFASLLMHNSDQNNYCSQYSTKYTSKSKASSADIEVTLIETHANLRILSTRSHRQLLKLIAGLQALRLTILHLNLTDFHPLVLYSISLKVEEGCQLRSVDDIAAAAHHMVRIIEEEAVLC 307
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 11859459 11862132 - CePI673135_09g011730.1 Cec09g1173 211683
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1173 307 MobiDBLite consensus disorder prediction 34 58 - -
Cec09g1173 307 Gene3D - 82 174 IPR036638 GO:0046983(InterPro)
Cec09g1173 307 PANTHER MAX DIMERIZATION, MAD 54 299 - GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec09g1173 307 SMART finulus 98 149 IPR011598 GO:0046983(InterPro)
Cec09g1173 307 MobiDBLite consensus disorder prediction 31 92 - -
Cec09g1173 307 Pfam Helix-loop-helix DNA-binding domain 93 144 IPR011598 GO:0046983(InterPro)
Cec09g1173 307 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 143 IPR011598 GO:0046983(InterPro)
Cec09g1173 307 Coils Coil 140 160 - -
Cec09g1173 307 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 160 IPR036638 GO:0046983(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1043 Cec-Chr5:9118329 Cec09g1173 Cec-Chr9:11859459 1.10E-21 dispersed
Cec08g1161 Cec-Chr8:23483568 Cec09g1173 Cec-Chr9:11859459 2.60E-48 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30237 PF00010 HLH 1.00E-10 No_clan Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1173 - - - 0.0