Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1179 TTTGGAGTAATTTCGGAACTGTTCGGACACTTTTCAGCAAGGATACCAGTCTGCCTTGGAGCTCAATTAGTTTTGAAGTGCTTTAGAACACTCAGTTACCATCGCCACCAGTCAATGCTTATCCCTACTGCTGTCAATGCCCTTAAATCCTCAAGGTCAATATCTTGGTTGCCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCGATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGCGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCGACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTCGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCCGCCAATGGTTTTCTACTGCCCCTCTGGACAACATGTTCTATGCCAAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGGGTGGTCATGCTACGCACGTAAATTTTGTTCGCCGCTTATCAGAAAACATTTGA 1056 44.6 FGVISELFGHFSARIPVCLGAQLVLKCFRTLSYHRHQSMLIPTAVNALKSSRSISWLPTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMAVDNCRIEIANEDDKDSEVEVPIFDGSAGKWVDAIEEIGLKLAIDQCGDCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPDIGRQWFSTAPLDNMFYAKQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKGGHATHVNFVRRLSENI 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11941952 11959974 - CePI673135_09g011790.1 Cec09g1179 211689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1179 351 Gene3D lpxc deacetylase, domain 2 198 351 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Cec09g1179 351 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 40 350 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cec09g1179 351 SUPERFAMILY Ribosomal protein S5 domain 2-like 62 181 IPR020568 -
Cec09g1179 351 Gene3D lpxc deacetylase, domain 1 61 186 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Cec09g1179 351 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 63 348 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cec09g1179 351 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 63 348 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cec09g1179 351 SUPERFAMILY Ribosomal protein S5 domain 2-like 201 349 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1179 K02535 - csv:101205101 582.793