Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g1195 | ATGACCGACTATCGATTACCACCGACCATGAATCTCTGGGCGGATGAGAACGTCTCCATGATGGACGTTTTCACCAACTCCGAACTCAGTTCTTTCTGGGTTACGCCGCCACAGCCACAGCAACTTCCTCAGCCACCTTATTTCACCTCAACAGACCCGAGTAAAGCCGTCGGTCAAGCAACACCGCCACCGTCCATGGCGGTTTTTAACCAGGAGACTCTTATGCAGCGTCTCCAAACGTTGATTGAAGGTGCTCATGAGAACTGGACTTACGCTATCTTCTGGCAGTCTTCGTACGACTACTCCGGCCGTACGGTCTTGGGGTGGGGGGATGGATATTACAAAGGCGAGGAAGATAAAGGGAAAGAGAAAGCTAAATCGAGTACCTCAAAAGCAGAGCAAGAACACCGGAAGAAGGTACTTCGTGAGCTTAACTCTCTCATTTCTGGTTCTCCTTCCTCTGAAGGCGACGCCGTCGATGAGGTTGTCACCGACACCGAGTGGTTCTACTTGGTGTCGATGACTCAGTCGTTTGCTTCCGGTGTTGGATTGCCGGGACAGGCGTTTTTCGATTCGACCCCTATTTGGGTTGCTGGTTCGGATCGGCTTGCGAGCTCGGTCTGTGAGCGGGCTCGTCAGGGTCAGGTTTTCGGGTTGCAGACTATGGTTTGTATACCGTCGGCGAACGGAGTTGTTGAATTGGGATCGAGTGAGTTGATTTTCCAGAGCTCCGATCTGATGAATAAGGTTAGGGTTTTGTTTAATTTCAACAATTTGGAGGTGGAGAATTGGCCAATTAGTGGGGTTGACCAAGGGGAGAATGATCCTTCTTCACTTTGGATTAGTGAGCCATCTTCAAACGCCATTGAAATTACTAATCCTGTTGCTTCAGCTTCAGCTCCAACTCCAAGCACAACAAACAGCCAACCGATTTCTAAAATTACAACAGAGACGATCGAGAACCCTAAATCTAGTGTTGTAATTGAAACTCCAAGCCCTGTTGTTCCTCCTCCTTCTCAAAAAACTCACCGACAGTCACAGCCGATTCAGACACAGAGCTTCTTCACCAACAGGGAATTGAATTTCTCTGAATTTGGGTATGAGAATGGTCGTTTGAAGGATGGGAATTCCACTTCGTTGAAGCCGGAATCCGGTGAGATTTTGAATTTTGGGGAGAGTAAGAGGAGTTCTTATCCCAACAAAGATAACAACTTGCCTTCGGGCAATTCTTTGTTTGGTGGGGATGAGAACAAGAAGAAGAGATCCCCCACTTCACGTGGGAGTAATGAAGAAGGGATGCTTTCTTTTTCTTCTGGTGTGATTCTTCCTTCTTCTGGGGCTGTGAAATCGGGTGTTTGCGCTGGCGATTCCGATCACTCCGATCTTGAAGCTTCGGTAATTCGTGAGGTGGAGAGTAGTAGAGTGGTGGAGCCGGAGAAACGGCCTCGGAAAAGAGGGCGAAAGCCAGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCAGAGAGGCAAAGGAGAGAAAAGCTTAACCAAAGATTCTATGCTCTTCGAGCTGTTGTTCCAAATGTATCCAAAATGGACAAAGCTTCACTCCTTGGTGATGCTATCTCTTACATCAATGAGCTCAGAGGGAAGCTTCAAACTGCAGAATCAGATAAGGAAGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTGATGATGTCTACTAATAAAGATTCGTGCATATCAAGCTCAAATCAACCCCCACCAGATCAATCATCAAACATAAACCATAGTGATATCGAAACCGATATCGACGTGAAGATAATCAGTTGGGATGCGATGATCCGAATCCAATCTAGTAAGAAAAACCATCCCGCTGCACGGCTGATGGCGGCTTTGGAAGAACTCGACTTGGATATCAACCACGCGAGCATCTCAGTTGTCAATGATCTCATGATCCAACAAGCAACTGTGAAGATGGGGAGTCGATTATACACTCAAGAGCAGCTAAGGATAGCATTATCGTCGAAAATAGGCGCAACTCGGTAG | 2037 | 46.93 | MTDYRLPPTMNLWADENVSMMDVFTNSELSSFWVTPPQPQQLPQPPYFTSTDPSKAVGQATPPPSMAVFNQETLMQRLQTLIEGAHENWTYAIFWQSSYDYSGRTVLGWGDGYYKGEEDKGKEKAKSSTSKAEQEHRKKVLRELNSLISGSPSSEGDAVDEVVTDTEWFYLVSMTQSFASGVGLPGQAFFDSTPIWVAGSDRLASSVCERARQGQVFGLQTMVCIPSANGVVELGSSELIFQSSDLMNKVRVLFNFNNLEVENWPISGVDQGENDPSSLWISEPSSNAIEITNPVASASAPTPSTTNSQPISKITTETIENPKSSVVIETPSPVVPPPSQKTHRQSQPIQTQSFFTNRELNFSEFGYENGRLKDGNSTSLKPESGEILNFGESKRSSYPNKDNNLPSGNSLFGGDENKKKRSPTSRGSNEEGMLSFSSGVILPSSGAVKSGVCAGDSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMMSTNKDSCISSSNQPPPDQSSNINHSDIETDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDINHASISVVNDLMIQQATVKMGSRLYTQEQLRIALSSKIGATR | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12378250 | 12380286 | + | CePI673135_09g011950.1 | Cec09g1195 | 211705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g1195 | 678 | Pfam | Helix-loop-helix DNA-binding domain | 498 | 544 | IPR011598 | GO:0046983(InterPro) | |
Cec09g1195 | 678 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 494 | 543 | IPR011598 | GO:0046983(InterPro) | |
Cec09g1195 | 678 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 74 | 254 | IPR025610 | - | |
Cec09g1195 | 678 | FunFam | Transcription factor bHLH13 | 487 | 561 | - | - | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 450 | 504 | - | - | |
Cec09g1195 | 678 | SMART | finulus | 500 | 549 | IPR011598 | GO:0046983(InterPro) | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 295 | 328 | - | - | |
Cec09g1195 | 678 | CDD | bHLH_AtAIB_like | 491 | 566 | - | - | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 295 | 355 | - | - | |
Cec09g1195 | 678 | Pfam | Plant bHLH transcription factor, ACT-like domain | 600 | 656 | IPR054502 | - | |
Cec09g1195 | 678 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 497 | 567 | IPR036638 | GO:0046983(InterPro) | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 390 | 433 | - | - | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 339 | 355 | - | - | |
Cec09g1195 | 678 | PANTHER | MYC | 66 | 673 | IPR045084 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro) | |
Cec09g1195 | 678 | Coils | Coil | 540 | 574 | - | - | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 573 | 594 | - | - | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 390 | 411 | - | - | |
Cec09g1195 | 678 | Gene3D | - | 493 | 571 | IPR036638 | GO:0046983(InterPro) | |
Cec09g1195 | 678 | MobiDBLite | consensus disorder prediction | 461 | 504 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1499 | Cec-Chr4:34509591 | Cec09g1195 | Cec-Chr9:12378250 | 8.10E-15 | dispersed | |
Cec07g0109 | Cec-Chr7:1156948 | Cec09g1195 | Cec-Chr9:12378250 | 5.20E-38 | dispersed | |
Cec09g1195 | Cec-Chr9:12378250 | Cec10g0083 | Cec-Chr10:787961 | 9.20E-30 | dispersed | |
Cec10g1370 | Cec-Chr10:27966263 | Cec09g1195 | Cec-Chr9:12378250 | 8.70E-08 | dispersed | |
Cec11g0183 | Cec-Chr11:1981516 | Cec09g1195 | Cec-Chr9:12378250 | 3.60E-06 | dispersed | |
Cec06g0862 | Cec-Chr6:10901416 | Cec09g1195 | Cec-Chr9:12378250 | 2.00E-08 | transposed | |
Cec10g0170 | Cec-Chr10:1673160 | Cec09g1195 | Cec-Chr9:12378250 | 2.00E-210 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30241 | PF14215 | bHLH-MYC_N | 7.20E-55 | CL0161 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g1195 | K13422 | - | csv:101218165 | 1162.13 |