Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1195 ATGACCGACTATCGATTACCACCGACCATGAATCTCTGGGCGGATGAGAACGTCTCCATGATGGACGTTTTCACCAACTCCGAACTCAGTTCTTTCTGGGTTACGCCGCCACAGCCACAGCAACTTCCTCAGCCACCTTATTTCACCTCAACAGACCCGAGTAAAGCCGTCGGTCAAGCAACACCGCCACCGTCCATGGCGGTTTTTAACCAGGAGACTCTTATGCAGCGTCTCCAAACGTTGATTGAAGGTGCTCATGAGAACTGGACTTACGCTATCTTCTGGCAGTCTTCGTACGACTACTCCGGCCGTACGGTCTTGGGGTGGGGGGATGGATATTACAAAGGCGAGGAAGATAAAGGGAAAGAGAAAGCTAAATCGAGTACCTCAAAAGCAGAGCAAGAACACCGGAAGAAGGTACTTCGTGAGCTTAACTCTCTCATTTCTGGTTCTCCTTCCTCTGAAGGCGACGCCGTCGATGAGGTTGTCACCGACACCGAGTGGTTCTACTTGGTGTCGATGACTCAGTCGTTTGCTTCCGGTGTTGGATTGCCGGGACAGGCGTTTTTCGATTCGACCCCTATTTGGGTTGCTGGTTCGGATCGGCTTGCGAGCTCGGTCTGTGAGCGGGCTCGTCAGGGTCAGGTTTTCGGGTTGCAGACTATGGTTTGTATACCGTCGGCGAACGGAGTTGTTGAATTGGGATCGAGTGAGTTGATTTTCCAGAGCTCCGATCTGATGAATAAGGTTAGGGTTTTGTTTAATTTCAACAATTTGGAGGTGGAGAATTGGCCAATTAGTGGGGTTGACCAAGGGGAGAATGATCCTTCTTCACTTTGGATTAGTGAGCCATCTTCAAACGCCATTGAAATTACTAATCCTGTTGCTTCAGCTTCAGCTCCAACTCCAAGCACAACAAACAGCCAACCGATTTCTAAAATTACAACAGAGACGATCGAGAACCCTAAATCTAGTGTTGTAATTGAAACTCCAAGCCCTGTTGTTCCTCCTCCTTCTCAAAAAACTCACCGACAGTCACAGCCGATTCAGACACAGAGCTTCTTCACCAACAGGGAATTGAATTTCTCTGAATTTGGGTATGAGAATGGTCGTTTGAAGGATGGGAATTCCACTTCGTTGAAGCCGGAATCCGGTGAGATTTTGAATTTTGGGGAGAGTAAGAGGAGTTCTTATCCCAACAAAGATAACAACTTGCCTTCGGGCAATTCTTTGTTTGGTGGGGATGAGAACAAGAAGAAGAGATCCCCCACTTCACGTGGGAGTAATGAAGAAGGGATGCTTTCTTTTTCTTCTGGTGTGATTCTTCCTTCTTCTGGGGCTGTGAAATCGGGTGTTTGCGCTGGCGATTCCGATCACTCCGATCTTGAAGCTTCGGTAATTCGTGAGGTGGAGAGTAGTAGAGTGGTGGAGCCGGAGAAACGGCCTCGGAAAAGAGGGCGAAAGCCAGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCAGAGAGGCAAAGGAGAGAAAAGCTTAACCAAAGATTCTATGCTCTTCGAGCTGTTGTTCCAAATGTATCCAAAATGGACAAAGCTTCACTCCTTGGTGATGCTATCTCTTACATCAATGAGCTCAGAGGGAAGCTTCAAACTGCAGAATCAGATAAGGAAGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTGATGATGTCTACTAATAAAGATTCGTGCATATCAAGCTCAAATCAACCCCCACCAGATCAATCATCAAACATAAACCATAGTGATATCGAAACCGATATCGACGTGAAGATAATCAGTTGGGATGCGATGATCCGAATCCAATCTAGTAAGAAAAACCATCCCGCTGCACGGCTGATGGCGGCTTTGGAAGAACTCGACTTGGATATCAACCACGCGAGCATCTCAGTTGTCAATGATCTCATGATCCAACAAGCAACTGTGAAGATGGGGAGTCGATTATACACTCAAGAGCAGCTAAGGATAGCATTATCGTCGAAAATAGGCGCAACTCGGTAG 2037 46.93 MTDYRLPPTMNLWADENVSMMDVFTNSELSSFWVTPPQPQQLPQPPYFTSTDPSKAVGQATPPPSMAVFNQETLMQRLQTLIEGAHENWTYAIFWQSSYDYSGRTVLGWGDGYYKGEEDKGKEKAKSSTSKAEQEHRKKVLRELNSLISGSPSSEGDAVDEVVTDTEWFYLVSMTQSFASGVGLPGQAFFDSTPIWVAGSDRLASSVCERARQGQVFGLQTMVCIPSANGVVELGSSELIFQSSDLMNKVRVLFNFNNLEVENWPISGVDQGENDPSSLWISEPSSNAIEITNPVASASAPTPSTTNSQPISKITTETIENPKSSVVIETPSPVVPPPSQKTHRQSQPIQTQSFFTNRELNFSEFGYENGRLKDGNSTSLKPESGEILNFGESKRSSYPNKDNNLPSGNSLFGGDENKKKRSPTSRGSNEEGMLSFSSGVILPSSGAVKSGVCAGDSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMMSTNKDSCISSSNQPPPDQSSNINHSDIETDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDINHASISVVNDLMIQQATVKMGSRLYTQEQLRIALSSKIGATR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12378250 12380286 + CePI673135_09g011950.1 Cec09g1195 211705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1195 678 Pfam Helix-loop-helix DNA-binding domain 498 544 IPR011598 GO:0046983(InterPro)
Cec09g1195 678 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 494 543 IPR011598 GO:0046983(InterPro)
Cec09g1195 678 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 74 254 IPR025610 -
Cec09g1195 678 FunFam Transcription factor bHLH13 487 561 - -
Cec09g1195 678 MobiDBLite consensus disorder prediction 450 504 - -
Cec09g1195 678 SMART finulus 500 549 IPR011598 GO:0046983(InterPro)
Cec09g1195 678 MobiDBLite consensus disorder prediction 295 328 - -
Cec09g1195 678 CDD bHLH_AtAIB_like 491 566 - -
Cec09g1195 678 MobiDBLite consensus disorder prediction 295 355 - -
Cec09g1195 678 Pfam Plant bHLH transcription factor, ACT-like domain 600 656 IPR054502 -
Cec09g1195 678 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 497 567 IPR036638 GO:0046983(InterPro)
Cec09g1195 678 MobiDBLite consensus disorder prediction 390 433 - -
Cec09g1195 678 MobiDBLite consensus disorder prediction 339 355 - -
Cec09g1195 678 PANTHER MYC 66 673 IPR045084 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)
Cec09g1195 678 Coils Coil 540 574 - -
Cec09g1195 678 MobiDBLite consensus disorder prediction 573 594 - -
Cec09g1195 678 MobiDBLite consensus disorder prediction 390 411 - -
Cec09g1195 678 Gene3D - 493 571 IPR036638 GO:0046983(InterPro)
Cec09g1195 678 MobiDBLite consensus disorder prediction 461 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1499 Cec-Chr4:34509591 Cec09g1195 Cec-Chr9:12378250 8.10E-15 dispersed
Cec07g0109 Cec-Chr7:1156948 Cec09g1195 Cec-Chr9:12378250 5.20E-38 dispersed
Cec09g1195 Cec-Chr9:12378250 Cec10g0083 Cec-Chr10:787961 9.20E-30 dispersed
Cec10g1370 Cec-Chr10:27966263 Cec09g1195 Cec-Chr9:12378250 8.70E-08 dispersed
Cec11g0183 Cec-Chr11:1981516 Cec09g1195 Cec-Chr9:12378250 3.60E-06 dispersed
Cec06g0862 Cec-Chr6:10901416 Cec09g1195 Cec-Chr9:12378250 2.00E-08 transposed
Cec10g0170 Cec-Chr10:1673160 Cec09g1195 Cec-Chr9:12378250 2.00E-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30241 PF14215 bHLH-MYC_N 7.20E-55 CL0161 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1195 K13422 - csv:101218165 1162.13