Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1211 ATGGCTGGTCTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGGCCTAATTTCAACCTTCACCACCATCATCAGAACCACCACCATCCCGACTCTCAATCTGGTCATGACGATGAATCCCATCCTCCGTCAGAATTCGTCACCGCCGCAGACTCTACCGCCCCTGCCACAGATATGGTGGCCTCTCGCCGACCACGCGGCCGTCCACCCGGTTCCAAAAACAAACCGAAGCCACCGGTCATCATAACCCGAGAAAGCGCCAATACCCTAAGGGCTCATATTCTTGAGGTTGGTAATGGCTGTGACGTCTTCGATAGCATCGCTACCTATGCTCGTCGTCGCCAGCGAGGGATCTGCATCTTGAGCGGTAGTGGAATGGTAATGAATGTCAACTTACGGCAACCGACGGCAACGGGGTCTGTGTTAACCCTACATGGAAGGTTTGAGATATTATCCCTTACTGGATCTTTCTTGCCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACTATATACTTAGCCGGTGGGCAAGGGCAAGTGGTCGGTGGAAACGTTGTTGGGGAATTGGTGGCGGCAGGGCCAGTTACAATCATCGCGGCATCATTTACAAATGTAGCATATGAGAGATTGCCACTAGAACAACAAGAGCAAGAACAAGAACAAGAGCAAGATCAACTTCAGATGCAGCCACCGACGTCGCAGGGCGGCAGTAGCAGTGGAAACAATAACAACCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAACCAAATTCAGCTACCATTTTGA 816 50.61 MAGLDLGNRYIHQLQRPNFNLHHHHQNHHHPDSQSGHDDESHPPSEFVTAADSTAPATDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSIATYARRRQRGICILSGSGMVMNVNLRQPTATGSVLTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEQQEQEQEQEQDQLQMQPPTSQGGSSSGNNNNPFPDPSSGLPFFNLPLNMQNQIQLPF 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12651514 12652329 - CePI673135_09g012110.1 Cec09g1211 211721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1211 271 CDD DUF296 92 175 IPR005175 -
Cec09g1211 271 PIRSF ESCAROLA 7 269 IPR014476 GO:0003680(InterPro)
Cec09g1211 271 MobiDBLite consensus disorder prediction 22 81 - -
Cec09g1211 271 MobiDBLite consensus disorder prediction 215 258 - -
Cec09g1211 271 MobiDBLite consensus disorder prediction 31 45 - -
Cec09g1211 271 MobiDBLite consensus disorder prediction 222 258 - -
Cec09g1211 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 204 IPR005175 -
Cec09g1211 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 263 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec09g1211 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 217 - -
Cec09g1211 271 Gene3D - 91 226 - -
Cec09g1211 271 ProSiteProfiles PPC domain profile profile. 88 224 IPR005175 -
Cec09g1211 271 FunFam AT-hook motif nuclear-localized protein 91 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0299 Cec-Chr5:2458679 Cec09g1211 Cec-Chr9:12651514 1.50E-78 dispersed
Cec06g0035 Cec-Chr6:362714 Cec09g1211 Cec-Chr9:12651514 7.90E-60 dispersed
Cec07g0387 Cec-Chr7:3952144 Cec09g1211 Cec-Chr9:12651514 7.20E-58 dispersed
Cec08g1205 Cec-Chr8:23980663 Cec09g1211 Cec-Chr9:12651514 3.70E-44 dispersed
Cec09g1211 Cec-Chr9:12651514 Cec11g0696 Cec-Chr11:7692374 3.20E-50 dispersed
Cec10g0179 Cec-Chr10:1756956 Cec09g1211 Cec-Chr9:12651514 1.10E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1211 - - - 0.0