Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g1250 | ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTCTGAACTTCTTCTTATCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTGTTGGTTGAGTACTTGCAATCTCCTAGTGATGTCCCAGGACCTTCGTCGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAATATCTTTGATAACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCGTTATCTTTGTTGTCTCTTGTTTTGGGTGTATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTTATTCAGTTTTGCTGCTTCTACTGATTTTGGTGCAACTAGGATGTGCTGCCTTCATATTCTTTGACAAAACTTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTTGAAGACAAGTGGGAAATCATCAGATGGGTTGCATTAGGAGCTGTAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGCAGACTATGACAGCGATGATGAGTACATTGCTCCAAGGCAACAAATCAGACAACCATTGATCAATAGGCCTGCTGCTCCTGCAACAGGTGTGCCTGTGGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCAGAGTTCACATACAACCCATCTGAGTCTCACAGTGTTTTAGCGGGTCCGAATGCTTGTGTCCGCTTGTATCCGCTTGTGTATAACCAGAGGTTTTTCCGGAGGCTGTACTTGTTTTTGCATGCAATTGAAACTTTAGGCGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATTATTCGACGACAAGTTGAGATAGCTGTGCTCGAGGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGCGATGCATCAGTTCTTCTGGACAGCAATGACGAGATGGTGAGCGAAAAGCAAGCAGCTCCAAATTTAAACTCTCTTCACGGTTTCAATGTTATCGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTTACATTGTGTCTTGTGCTGATATTTTGACCATTGCCGCCCGTGATGCTGTTGTGCTCAGGGGAGGCCCTGGATGGCCAGTGTTATTGGGAAGGAAAGACTCCTTGGAAGCAAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCCCTTGAGACCCTAATTGCCAATTTTCAAGAACAAGGTCTTAATGTTGGAGACTTGGTTGCTCTATCTGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTTAGGCAAAGAGTATACCAAATGAATCCAGAAGAAGAATATGACAGATACAAGAGATACAACACATACAGAAAAATTTTAAGGTCAATCTGCCCTAAAACAGGGCAGGATCAAAGGGTAGCACCCCTAGATTTTAGGACACCTTCAAGATTTGACAATCACTATTTCCTCAACATTCTTGAAGGTAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATCACAAGACAAGTTTGGAGTTATGCCTCTGACCAAACCCTTTTCTTTGATTCCTTTGTTAAGTCCATTGTCAAGATGGGCAACATCAATGTCCTCACTTCCCATCAAGTAGCTTTCCAACGACCCCCTACACAAATTGTCTCAAGAGGGGAAAATGGGGAAGGGGAAGGGGAAGGAGGGATATACCTTCTCAAGACGGCTTCAAGCAATATGACATTAGCTGTCATGATGTCTCTTTCTTTTGAAGATCCTCGATTGAAATAG | 1932 | 43.69 | MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDVPGPSSSGDHDLVQLGRPMLMAVSLSSNIFDNLPKAWFIYLFIAVGVVIFVVSCFGCIGAATRNGCCLSCYSVLLLLLILVQLGCAAFIFFDKTWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPADYDSDDEYIAPRQQIRQPLINRPAAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHSVLAGPNACVRLYPLVYNQRFFRRLYLFLHAIETLGDGLLVFDYYKETCPFVEDIIRRQVEIAVLEDPRMAASLLRLHFHDCFVMGCDASVLLDSNDEMVSEKQAAPNLNSLHGFNVIDEIKYILEEACPYIVSCADILTIAARDAVVLRGGPGWPVLLGRKDSLEASFDGANKYIPSPNSSLETLIANFQEQGLNVGDLVALSGSHTIGKARCLSFRQRVYQMNPEEEYDRYKRYNTYRKILRSICPKTGQDQRVAPLDFRTPSRFDNHYFLNILEGKGLLGSDNVLITQDHEGEITRQVWSYASDQTLFFDSFVKSIVKMGNINVLTSHQVAFQRPPTQIVSRGENGEGEGEGGIYLLKTASSNMTLAVMMSLSFEDPRLK | 643 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 13996087 | 14006350 | - | CePI673135_09g012500.1 | Cec09g1250 | 211760 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 411 | 426 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 518 | 533 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 458 | 470 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 333 | 353 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 392 | 402 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 534 | 551 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 577 | 590 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 309 | 328 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Plant peroxidase signature | 373 | 386 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | Pfam | Tetraspanin family | 8 | 137 | IPR018499 | GO:0016020(InterPro) | |
| Cec09g1250 | 643 | Pfam | Peroxidase | 317 | 563 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | ProSiteProfiles | Plant heme peroxidase family profile. | 299 | 610 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | SUPERFAMILY | Heme-dependent peroxidases | 301 | 592 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | FunFam | Peroxidase | 437 | 582 | - | - | |
| Cec09g1250 | 643 | Gene3D | Peroxidase, domain 2 | 437 | 583 | - | - | |
| Cec09g1250 | 643 | ProSitePatterns | Peroxidases active site signature. | 331 | 342 | IPR019794 | GO:0004601(InterPro) | |
| Cec09g1250 | 643 | FunFam | Peroxidase | 303 | 447 | - | - | |
| Cec09g1250 | 643 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 459 | 469 | IPR019793 | - | |
| Cec09g1250 | 643 | PANTHER | PEROXIDASE 72-RELATED | 291 | 592 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | Gene3D | - | 304 | 592 | - | - | |
| Cec09g1250 | 643 | PRINTS | Haem peroxidase superfamily signature | 331 | 345 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Haem peroxidase superfamily signature | 411 | 423 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Haem peroxidase superfamily signature | 520 | 535 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Haem peroxidase superfamily signature | 393 | 410 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | PRINTS | Haem peroxidase superfamily signature | 459 | 474 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec09g1250 | 643 | CDD | secretory_peroxidase | 300 | 589 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec04g1691 | Cec-Chr4:36042104 | Cec09g1250 | Cec-Chr9:13996087 | 5.30E-79 | dispersed | |
| Cec09g1250 | Cec-Chr9:13996087 | Cec11g0607 | Cec-Chr11:6671703 | 2.30E-70 | dispersed | |
| Cec09g1250 | Cec-Chr9:13996087 | Cec07g0954 | Cec-Chr7:23438909 | 2.20E-81 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g1250 | K00430 | - | csv:116402797 | 530.406 |