Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec09g1347 | ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGTGCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATTATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATCAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAGATCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTCACATTTCTTGAGAGCTCCGGCCTCGCTAAATACGGCACCGAGGCCTTTCTCGTCAACTTCACCGCCATCACCACCGTCATTTTTGCACTGTTTGTGATTTTGTCTGTTATTTCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA | 699 | 47.35 | MALAVKAFPFTVVSHVLAIVVLILVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLVNFTAITTVIFALFVILSVISQPCVQEDNHGDYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 16962880 | 16971637 | + | CePI673135_09g013470.1 | Cec09g1347 | 211857 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec09g1347 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cec09g1347 | 232 | PANTHER | CYTOCHROME B561-RELATED | 5 | 222 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| Cec09g1347 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cec09g1347 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cec09g1347 | 232 | Gene3D | - | 2 | 226 | - | - | |
| Cec09g1347 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cec09g1347 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g0680 | Cec-Chr1:7485973 | Cec09g1347 | Cec-Chr9:16962880 | 9.50E-48 | dispersed | |
| Cec07g0728 | Cec-Chr7:14361103 | Cec09g1347 | Cec-Chr9:16962880 | 7.90E-47 | dispersed | |
| Cec09g1347 | Cec-Chr9:16962880 | Cec11g0556 | Cec-Chr11:6087148 | 4.50E-53 | dispersed | |
| Cec09g1347 | Cec-Chr9:16962880 | Cec05g2535 | Cec-Chr5:36360908 | 1.10E-27 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec09g1347 | K08360 | - | csv:101209308 | 384.415 |