Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1405 ATGAAGCTCATCCCCTTCCTTCCATGGCTGAACCTCCACATGGTCCTCTTCTTCTTCTTCTTCTTCTTCCTTGCTTCTTCTTCACTTCTTCATTCATCCCCTGCCTCTTCACTTCCCCACAATGAAGGACGAGCGCTTATGACAATCAAGGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTTGACTGGGATGACGATCACAACCACGATTTCTGTTCATGGCGTGGAGTTTTCTGCGACAATGTTAGCCTTTCTGTTGCTGCTTTTGACTTTCAAGGGAATAAACTGACTGGCCAAATCCCTGATGAGATTGGTAACTGTGGTCTTCTTGTCCATTTGGACTTGTCTGATAATTTACTCTATGGAGACATCCCCTTCACGGTTTCAAAGCTAAAGCAGCTCGAGTTTTTAAATATGAAGAACAATCAGTTGACCGGTCCGATTCCTTCAACCTTAACCCAGATTCCCAATCTGAAAACTCTTGATCTTGCGCGCAACCAGCTTACTGGGGAGATACCTAGATTAATCTATTGGAATGAAGTTCTGCAATATCTTGGATTACGAGGGAACTTTTTGACAGGGTCGTTGTCCTCCGATATGTGTCAATTGACTGGCTTGTGGTATTTTGATGTAAGGGGAAATAATCTGACTGGAACAATACCGGATAGCATAGGAAACTGTACCAGTTTTGAAATTCTGGATATATCCTACAATCAGATCTCGGGAGAGATTCCATACAACATTGGATTTCTACAAGTGGCCACTTTATCATTACAGGGAAATAGGTTGAGTGGTAAGATTCCTGATGTCATTGGATTAATGCAGGCCCTTGCTGTTCTGGATTTGAGTGAGAATGAGCTTGAAGGACCAATACCGCCAATACTTGGCAACTTGTCCTACACAGGAAAATTGTATCTACATGGAAACAAGTTGACTGGGTCAATTCCTCCTGAGCTGGGCAATATGTCAAAGCTTAGCTACTTGCAACTAAATGATAACCAGTTGGTTGGCACAATTCCTTCTGAACTTGGGAAATTGGATCAGTTGTTTGAATTAAATCTTGCCAATAATTATCTTGAAGGACCCATCCCTCATAACATCAGCTCTTGCACTGCATTGAATCAATTCAATGTGCACGGAAACAATCTTAATGGATCAATCCCTTTGGGTTTCCAAAATCTGGAGAGCTTGACCTATTTGAACCTTTCAGCAAACAACTTCAAAGGCAGGATTCCCATGGAGCTGGGGCGTATAGTAAACCTCGATACATTGGATCTATCTTGCAATTACTTCTTGGGTCCTGTTCCTGCTTCTATTGGTGATTTGGAACACCTTCTTAGCCTCAATTTGAGCAATAACCGACTCGTCGGGCCGTTGCCGGCAGAATTTGGGAATCTCCGAAGTGTTCAGGCTATTGATATGTCATTCAACAACTTTTCTGGTAGCATACCCATGGAGTTGGGTCAACTGCAAAATATTATCTCCCTCATTTTGAACAACAACCATTTTCAAGGGAAAATACCTGATCAGCTGACTAATTGTTTTAGTCTTCTTGCCAATTTGAACTTGTCATACAACAACTTATCTGGTATCTTACCTCCCATGAAAAATTTCTCTCGATTCGAACCAAATAGCTTTATCGGGAATCCGCTGCTGTGTGGAAACTGGCTGGGGTCGATCTGTGGGCCTTATATGGAAAAATCTCGAGCAATGTTGTCTCGGACAGTGGTTGTTTGTATGACATTTGGATTCATAGTATTGTTGTCGATGGTTATAATTGCTGTTTACAAGTCGAATCCCTCGAAGCAATTGATGAAGGGTTCTAGCAAGACTGGGCAAGGTCCTCCAAATCTTGTGGTACTTCATATGGATATGGCTATTCACACCTTTGAGGACATTATGAGAATGACTGAGAATCTAAGCGAGAAGTACATTATTGGTTACGGAGCTTCTAGCACTGTGTACAAATGTTTACTGAAAAATTCCCGACCTATTGCAATTAAGCGACTTTATAATCACTATGCACACAATTTTCGGGAGTTTGAGACCGAACTCGAAACCATTGGTAGTATCAGACATAGAAATCTTGTTAGCCTTCATGGTTATTCGTTATCTCCCTGTGGGAATCTCCTCTTCTATGACTACATGGAAAATGGTTCACTCTGGGATCTGCTTCATGGGACAGGTAAGAAGGTTAAACTGGATTGGGAAGCACGTCTGAAAATTGCGGTTGGAGCTGCGCAAGGGCTTGCATATCTTCACCATGATTGTAACCCCCGAATCATTCACCGGGATGTCAAGTCTTCAAATATTCTACTGGATGAAAATTTTGAGGCCCATCTTTCTGATTTCGGGATTGCCAAATGCATCCCAACTGCCAAAACACACACGTCGACTTATGTGCTTGGAACAATTGGCTACATTGATCCGGAGTATGCCCGGACCTCCCGGCTTAACGAGAAGTCTGATGTTTATAGCTTTGGCATTGTTCTTCTTGAACTACTGACCGGGAAGAAAGCTGTGGATGATGAGTCCAATTTGCATCAGCTGATATTGTCCAAGACTGATAACAATACCGTGATGGAAGCTGTTGATCCTGAGGTTTCAGTCACCTGCATTGATTTAGCTCATGTTCGAAAAGCGTTCCAGCTTGCTCTCCTCTGCACAAAACACAATCCCTCCGAACGGCCAACCATGCACGAAGTTGCACGAGTATTGATCTCCCTCCAGCCACCACCACCACCACCTACTGTGAAACAAACTTCATTCCCCATGAAAACGTTGGATTACGCACAGTTTGTGATCGAAAAGGGTCAGAATCGAAACTTGAAAGGGCAGGAGGAGCAGCAGAAGTCAGATATGAATACTTCGGATGCTCGGTGGTTTGTTCGGTTTGGGGAAGCGATGTCTGAACAACACAGTTTGAATCAATAA 2934 42.98 MKLIPFLPWLNLHMVLFFFFFFFLASSSLLHSSPASSLPHNEGRALMTIKASFSNVANVLLDWDDDHNHDFCSWRGVFCDNVSLSVAAFDFQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDIPFTVSKLKQLEFLNMKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLSGKIPDVIGLMQALAVLDLSENELEGPIPPILGNLSYTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNDNQLVGTIPSELGKLDQLFELNLANNYLEGPIPHNISSCTALNQFNVHGNNLNGSIPLGFQNLESLTYLNLSANNFKGRIPMELGRIVNLDTLDLSCNYFLGPVPASIGDLEHLLSLNLSNNRLVGPLPAEFGNLRSVQAIDMSFNNFSGSIPMELGQLQNIISLILNNNHFQGKIPDQLTNCFSLLANLNLSYNNLSGILPPMKNFSRFEPNSFIGNPLLCGNWLGSICGPYMEKSRAMLSRTVVVCMTFGFIVLLSMVIIAVYKSNPSKQLMKGSSKTGQGPPNLVVLHMDMAIHTFEDIMRMTENLSEKYIIGYGASSTVYKCLLKNSRPIAIKRLYNHYAHNFREFETELETIGSIRHRNLVSLHGYSLSPCGNLLFYDYMENGSLWDLLHGTGKKVKLDWEARLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILLDENFEAHLSDFGIAKCIPTAKTHTSTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDDESNLHQLILSKTDNNTVMEAVDPEVSVTCIDLAHVRKAFQLALLCTKHNPSERPTMHEVARVLISLQPPPPPPTVKQTSFPMKTLDYAQFVIEKGQNRNLKGQEEQQKSDMNTSDARWFVRFGEAMSEQHSLNQ 977
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20059145 20064907 - CePI673135_09g014050.1 Cec09g1405 211915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1405 977 SUPERFAMILY Protein kinase-like (PK-like) 617 907 IPR011009 -
Cec09g1405 977 SMART serkin_6 640 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1405 977 ProSiteProfiles Protein kinase domain profile. 640 909 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1405 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 611 715 - -
Cec09g1405 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 290 564 - -
Cec09g1405 977 Gene3D Transferase(Phosphotransferase) domain 1 716 912 - -
Cec09g1405 977 SUPERFAMILY L domain-like 41 313 - -
Cec09g1405 977 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Cec09g1405 977 FunFam Piriformospora indica-insensitive protein 2 81 174 - -
Cec09g1405 977 Gene3D Phosphorylase Kinase; domain 1 606 715 - -
Cec09g1405 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1405 977 Pfam Leucine rich repeat 420 479 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 716 916 - -
Cec09g1405 977 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524(InterPro)
Cec09g1405 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 179 289 - -
Cec09g1405 977 SUPERFAMILY L domain-like 303 554 - -
Cec09g1405 977 SMART LRR_typ_2 394 418 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 155 179 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 274 298 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 442 465 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 131 154 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 322 346 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 490 514 IPR003591 -
Cec09g1405 977 SMART LRR_typ_2 203 227 IPR003591 -
Cec09g1405 977 Gene3D Ribonuclease Inhibitor 36 88 IPR032675 -
Cec09g1405 977 Gene3D Ribonuclease Inhibitor 89 338 IPR032675 -
Cec09g1405 977 Pfam Leucine Rich Repeat 277 298 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 231 251 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 133 153 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 349 370 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 303 322 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 396 416 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 157 176 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 519 534 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 Pfam Leucine Rich Repeat 324 346 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 CDD STKc_IRAK 646 909 - -
Cec09g1405 977 Gene3D Ribonuclease Inhibitor 339 435 IPR032675 -
Cec09g1405 977 Gene3D Ribonuclease Inhibitor 436 562 IPR032675 -
Cec09g1405 977 Pfam Protein kinase domain 643 903 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1405 977 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515(InterPro)
Cec09g1405 977 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 907 IPR050647 GO:0009553(PANTHER)|GO:0010103(PANTHER)|GO:0048481(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1747 Cec-Chr5:29074561 Cec09g1405 Cec-Chr9:20059145 4.80E-156 dispersed
Cec07g1536 Cec-Chr7:30945452 Cec09g1405 Cec-Chr9:20059145 1.10E-56 dispersed
Cec09g1405 Cec-Chr9:20059145 Cec11g1677 Cec-Chr11:31039582 2.70E-67 dispersed
Cec09g1405 Cec-Chr9:20059145 Cec11g1765 Cec-Chr11:31850201 2.20E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72267 PF00069 Pkinase 3.20E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1405 K20718 - csv:101213139 1789.24