Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g1450 | ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTCAGTGCAGGTCAATTACCATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCTGGGACTCCTGCTATTACAATTCCCCCAACTCAGCCACCATCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAGCACTTCCACCACCAGCAACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTTCCCCTTGCTCGAATCAAGAAAATTATGAAAGCAGACGAAGACGTAAGAATGATTTCAGCTGAAGCACCAGTTATATTCGCGAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCAATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTTGGAATCACGAAAGGTTCCATTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACCGCTCAACACCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAG | 801 | 46.44 | MDQSERSQHQQQSQQPAGGVSAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKGSIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQHPRPSMPFMPWPHTQPQQQQQTQQQSDA | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 21685224 | 21686024 | - | CePI673135_09g014500.1 | Cec09g1450 | 211960 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g1450 | 266 | MobiDBLite | consensus disorder prediction | 250 | 266 | - | - | |
Cec09g1450 | 266 | Pfam | Core histone H2A/H2B/H3/H4 | 56 | 166 | IPR007125 | GO:0003677(InterPro) | |
Cec09g1450 | 266 | MobiDBLite | consensus disorder prediction | 55 | 76 | - | - | |
Cec09g1450 | 266 | MobiDBLite | consensus disorder prediction | 236 | 266 | - | - | |
Cec09g1450 | 266 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 83 | 251 | IPR050568 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Cec09g1450 | 266 | SUPERFAMILY | Histone-fold | 59 | 175 | IPR009072 | GO:0046982(InterPro) | |
Cec09g1450 | 266 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cec09g1450 | 266 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cec09g1450 | 266 | Gene3D | Histone, subunit A | 64 | 181 | IPR009072 | GO:0046982(InterPro) | |
Cec09g1450 | 266 | FunFam | Nuclear transcription factor Y subunit gamma | 69 | 181 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1748 | Cec-Chr3:35814002 | Cec09g1450 | Cec-Chr9:21685224 | 5.30E-30 | dispersed | |
Cec06g1985 | Cec-Chr6:33124283 | Cec09g1450 | Cec-Chr9:21685224 | 9.60E-53 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30253 | PF00125 | Histone | 6.00E-18 | CL0012 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g1450 | K08066 | - | csv:101213813 | 417.157 |