Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1458 ATGGACAACATTACTGCCCAATTAAAGAGGGGAATCTCCCGCCAATTCTCCACCGGCTCCTTACGCCGAACCCTAAGTCGTCAGTTCACCCGCCAATCCTCTCTTGACCCTAGGAGGAACAATTTGAGATTCAGCTTTGGCCGACAATCTTCTTTGGACCCTATTCGCCGCTGTCCTGATGATGATAATGAGCTTTCCGTTCCTGAGAATTTGGATTCCACTATGCAGCTTCTCTTTATGGCCTGCCGTGGCGATGTTAGAGGCGTTGAGGATTTGCTTAATGATGGTACTGATGTTAATAGTATTGATTTGGATGGCCGCACTGCTTTGCATATTGCTGCCTGTGAAGGTCATGCTGAGGTTGTTAAGCTTTTGCTTAGCCGTAGGGCTAATATTGACGCTCGTGATCGTTGGGGGAGTACGGCAGCTGCAGATGCTAAATATTACGGAAATACAGAAATTTACAACATTCTGAAGGCACGTGGAGCAAAAGTTCCGAAATTTAGGAAGACACCAATGACTGTTGCAAATCCTAGGGAAGTTCCTGAGTATGAGCTTAATCCATTGGAGCTTCAGATTCGAAGGAGTGATGGTATATCAAAGGGGACGTATCAAGTTGCCAAATGGAATGGTACAAAAGTCGCTGTGAAAATTCTTGATAAAGATTGTTATTGTAACCCGGATTCTATAAATGCATTCAAACATGAGTTGACATTATTGGAAAAGGTCCGACATCCCAATGTAGTTCAGTTTGTTGGTGCCGTTACCCAGAATTTGCCAATGATGATTGTTTCCGAATACCATCCTAAGGGTGATTTAGGTTGCTATCTTCAAAAGAAAGGTCGTTTATCTCCATCTAAAGCCTTAAGATTCGCCCTTGATATCGCTAGGGGAATGAACTATCTTCATGAATGCAAACCGGATCCGATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGACAACTTAAAGTTGCTGGATTCGGCTTGATAAGATTGTCAAAAATGTCACCTGACAAAGCAAAACTAGCTCAGCCAGTGGTTATTGATTATTCGAACTCGTACTTAGCACCCGAGATTTACCACGATGAAATATTTGACAGAAGCGTCGATGCATTTTCATTCGGTCTCATTTTATACGAGATGGTTGAGGGTATTCAACCATTTCATCCCAAGCCTCCAGAAGAGGTTGCCAAAGCTATTTGTGTAGAAGGAAAGAGACCTCCGTTTAAGATCAAATCGAAAAGTTATCCACCTGATCTAAAAGAATTGATTGAGGAATGCTGGGATCCAGAACCTGTAATGAGGCCTACTTTCTCCGAAATTATTGTAAGGTTGGATAAAATAGTTGCCAACTGCTCAAAACAAGGGTGGTGGAAAGACACATTTAAACTTCCCTGGAAATAA 1422 42.12 MDNITAQLKRGISRQFSTGSLRRTLSRQFTRQSSLDPRRNNLRFSFGRQSSLDPIRRCPDDDNELSVPENLDSTMQLLFMACRGDVRGVEDLLNDGTDVNSIDLDGRTALHIAACEGHAEVVKLLLSRRANIDARDRWGSTAAADAKYYGNTEIYNILKARGAKVPKFRKTPMTVANPREVPEYELNPLELQIRRSDGISKGTYQVAKWNGTKVAVKILDKDCYCNPDSINAFKHELTLLEKVRHPNVVQFVGAVTQNLPMMIVSEYHPKGDLGCYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGLIRLSKMSPDKAKLAQPVVIDYSNSYLAPEIYHDEIFDRSVDAFSFGLILYEMVEGIQPFHPKPPEEVAKAICVEGKRPPFKIKSKSYPPDLKELIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPWK 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22219160 22223287 + CePI673135_09g014580.1 Cec09g1458 211968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1458 473 FunFam serine/threonine-protein kinase STY46-like 186 269 - -
Cec09g1458 473 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 452 IPR051681 GO:0004674(PANTHER)
Cec09g1458 473 ProSiteProfiles Protein kinase domain profile. 189 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1458 473 Gene3D Phosphorylase Kinase; domain 1 187 268 - -
Cec09g1458 473 SUPERFAMILY Ankyrin repeat 73 176 IPR036770 -
Cec09g1458 473 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Cec09g1458 473 Gene3D Transferase(Phosphotransferase) domain 1 269 467 - -
Cec09g1458 473 Pfam Protein tyrosine and serine/threonine kinase 199 451 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1458 473 SUPERFAMILY Protein kinase-like (PK-like) 202 451 IPR011009 -
Cec09g1458 473 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515(InterPro)
Cec09g1458 473 FunFam Os01g0748600 protein 179 470 - -
Cec09g1458 473 CDD STKc_MAP3K-like 199 451 - -
Cec09g1458 473 PIRSF ILK 8 472 - -
Cec09g1458 473 SMART ANK_2a 73 101 IPR002110 GO:0005515(InterPro)
Cec09g1458 473 SMART ANK_2a 105 134 IPR002110 GO:0005515(InterPro)
Cec09g1458 473 SMART ANK_2a 138 167 IPR002110 GO:0005515(InterPro)
Cec09g1458 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1458 473 Gene3D - 48 184 IPR036770 -
Cec09g1458 473 SMART serkin_6 193 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1458 473 Pfam Ankyrin repeats (3 copies) 78 165 IPR002110 GO:0005515(InterPro)
Cec09g1458 473 FunFam Integrin-linked protein kinase 1 47 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0681 Cec-Chr3:7320698 Cec09g1458 Cec-Chr9:22219160 7.30E-87 dispersed
Cec04g2113 Cec-Chr4:39034756 Cec09g1458 Cec-Chr9:22219160 1.10E-80 dispersed
Cec05g2630 Cec-Chr5:37064021 Cec09g1458 Cec-Chr9:22219160 2.40E-58 dispersed
Cec09g1458 Cec-Chr9:22219160 Cec11g1517 Cec-Chr11:29376439 2.40E-40 dispersed
Cec09g1458 Cec-Chr9:22219160 Cec02g1918 Cec-Chr2:37007107 2.80E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72268 PF07714 PK_Tyr_Ser-Thr 7.70E-51 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1458 - - - 0.0