Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g1638 | ATGTGCCTAAATAAAAGGGAGGCCAGCGTAGACAAGCCAACCCCAAAGGCCTTACCAAAAGCTACTCAAGGAGGGAAACAAAAGGCACGCGTCTTTGCACTAAAGAAAGAGGAGGCTGAAGATATGAACGCAATGGTTTCAGCGCCTTATTATCAAATGATCTGTGGAGAGATGAGAAGCAATGAAATGGGGAGAGCAACGTTGATGTTTTTTTCTCCTTTCCTGCGCTTAATTTTGGCTATGGCTTTCGTTTTACTGGTGTCTGCAAATGGGGAAGGTGATGCCCTAAATGCCTTCAAGATGAGTTTGGTTGACCCCAACAATGTCTTGCACAGTTGGAATACCATTCTTATGAATCCTTGCACATGGTTTCATGTTACATGTGATGAAAAAGAAAGTGTTATACGTGTTAATCTTGGTAATGCCAATCTGTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAATTTGCGGTACTTGGAACTCTACAGCAATAATATCAGCGGAACAATTCCAGAAAGATTTGGAAATTTGAAAAACTTGGAGAGCTTGGATCTTTATTCTAACAGTTTAACTGGTCCCATACCTGACACACTGTGCAAACTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGCTTATCAGGAACCATTCCAATGTCTTTAACCACTGTTCCACTTCAACTTCTGGATCTTTCAAATAACCTTCTAACAGGAGACATTCCTGTCAATGGTTCGTTCTCTCTTTTCACACCAATCAGTTTTGCCAATAATCCTCTTCACATTTCTCCCTCTGCTCCTCCTCCGCCAACGAGAGATACACCACGAACATCTTCAGGTGATGGGGCTAATGGAGTCATTGTTGGAGCAATTGTTGCTGCTGCTGCTTTGCTGGTTGTTGTGCCTGCTACTGCAGTTAATCTTTGGCGACGAAAAACTCGAAAGGACCACTTCTTTGATGTGGCTGCTGAAGAAGATCCTGAAATTAAACTGGGCCAGCTCAAAAAATATTCCCTGCGCGAGCTGCAAGTTGCCACTGATTATTTTAGCCAACAGAACATTTTGGGCAAAGGTGGATTTGGCAAGGTCTATAAAGGTCGTTTGGCTGATGGTTCTCTTGTGGCTGTAAAACGATTGAAGGAGGAGCCTGCTGAGGTTGGAGAGCTTCAATTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTCCATCGTAATCTACTCCGTCTAAATGGATTTTGCATATCACCAACTGAACGATTGCTTGTCTATCCTTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCATAAGCAATGCCAGCCACCACTCAACTGGGAAATACGTAAACGAGTTGCTATAGGGGCTGCACAGGGACTTGAATATTTACATAAGCATTGTGATCCTAAAATTATTCACCGTGATGTGAAAGCTGCAAATATATTACTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGATTGGCTAAACTCATGAACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGGCATATAGCGCCAGAGTACCTCTCGTCTGGAAAGTCTTCTGAAAAATCTGATGTTTTTGGTTATGGAGTAATGCTTCTTGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTAGCAAAAGATGATGACATCATGTTACTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTCGATCCCAATCTCGGAGGCAATTACGTAGAGGAAGAACTGGAGCAGGTAATTCAAGTTGCACTGCTTTGCACGCAAAGCTCCCCTGTGGAGCGACCAAAGATGTCGGAGGTGTTGCAAATGCTGGAAGGAGATGGTTTGGCTGAAAGATGGGAAGAATGGCAGAAAGAAGAGAGCTCACGCCGAAACTTCAATAATATGGTTCATTCTTCCCACCACCGGAGTAGAACTCCCCAGTTTATTGATTCCACTTCTCATATTGCTCCTGATGTGTTGTCTGGTCCAAGATAG | 2040 | 42.84 | MCLNKREASVDKPTPKALPKATQGGKQKARVFALKKEEAEDMNAMVSAPYYQMICGEMRSNEMGRATLMFFSPFLRLILAMAFVLLVSANGEGDALNAFKMSLVDPNNVLHSWNTILMNPCTWFHVTCDEKESVIRVNLGNANLSGKLVPQLDQLTNLRYLELYSNNISGTIPERFGNLKNLESLDLYSNSLTGPIPDTLCKLTKLSTLRLNNNSLSGTIPMSLTTVPLQLLDLSNNLLTGDIPVNGSFSLFTPISFANNPLHISPSAPPPPTRDTPRTSSGDGANGVIVGAIVAAAALLVVVPATAVNLWRRKTRKDHFFDVAAEEDPEIKLGQLKKYSLRELQVATDYFSQQNILGKGGFGKVYKGRLADGSLVAVKRLKEEPAEVGELQFQTEVEMISMAVHRNLLRLNGFCISPTERLLVYPYMANGSLASCLREHKQCQPPLNWEIRKRVAIGAAQGLEYLHKHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSSGKSSEKSDVFGYGVMLLELVTGQKAFDLARLAKDDDIMLLDWVKGLLNDKKLETLVDPNLGGNYVEEELEQVIQVALLCTQSSPVERPKMSEVLQMLEGDGLAERWEEWQKEESSRRNFNNMVHSSHHRSRTPQFIDSTSHIAPDVLSGPR | 679 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 29586358 | 29612825 | - | CePI673135_09g016380.1 | Cec09g1638 | 212148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g1638 | 679 | FunFam | Somatic embryogenesis receptor kinase 1 | 320 | 427 | - | - | |
Cec09g1638 | 679 | MobiDBLite | consensus disorder prediction | 647 | 669 | - | - | |
Cec09g1638 | 679 | Pfam | Leucine rich repeat | 156 | 216 | IPR001611 | GO:0005515(InterPro) | |
Cec09g1638 | 679 | Pfam | Leucine Rich Repeat | 229 | 245 | IPR001611 | GO:0005515(InterPro) | |
Cec09g1638 | 679 | MobiDBLite | consensus disorder prediction | 645 | 679 | - | - | |
Cec09g1638 | 679 | SMART | serkin_6 | 351 | 625 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1638 | 679 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 428 | 645 | - | - | |
Cec09g1638 | 679 | Pfam | Protein tyrosine and serine/threonine kinase | 353 | 625 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g1638 | 679 | Gene3D | Phosphorylase Kinase; domain 1 | 320 | 427 | - | - | |
Cec09g1638 | 679 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cec09g1638 | 679 | SUPERFAMILY | L domain-like | 91 | 263 | - | - | |
Cec09g1638 | 679 | ProSitePatterns | Protein kinases ATP-binding region signature. | 357 | 379 | IPR017441 | GO:0005524(InterPro) | |
Cec09g1638 | 679 | MobiDBLite | consensus disorder prediction | 263 | 282 | - | - | |
Cec09g1638 | 679 | Pfam | Leucine rich repeat N-terminal domain | 90 | 129 | IPR013210 | - | |
Cec09g1638 | 679 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 73 | 650 | - | - | |
Cec09g1638 | 679 | Gene3D | Transferase(Phosphotransferase) domain 1 | 428 | 645 | - | - | |
Cec09g1638 | 679 | ProSiteProfiles | Protein kinase domain profile. | 351 | 638 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec09g1638 | 679 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 474 | 486 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec09g1638 | 679 | Gene3D | Ribonuclease Inhibitor | 89 | 268 | IPR032675 | - | |
Cec09g1638 | 679 | FunFam | Somatic embryogenesis receptor kinase 1 | 88 | 273 | - | - | |
Cec09g1638 | 679 | SUPERFAMILY | Protein kinase-like (PK-like) | 333 | 626 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2097 | Cec-Chr5:32771248 | Cec09g1638 | Cec-Chr9:29586358 | 2.20E-35 | dispersed | |
Cec09g1638 | Cec-Chr9:29586358 | Cec10g0926 | Cec-Chr10:20516035 | 1.30E-209 | dispersed | |
Cec11g0838 | Cec-Chr11:10406926 | Cec09g1638 | Cec-Chr9:29586358 | 1.80E-11 | dispersed | |
Cec09g1638 | Cec-Chr9:29586358 | Cec11g0528 | Cec-Chr11:5619330 | 1.20E-122 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72269 | PF00069 | Pkinase | 4.10E-45 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g1638 | K13416 | - | csv:101216386 | 995.727 |