Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1710 ATGGATTTTGCTTGTTTCAATCGACCCAATAGCGAATCATTTGACAATAGCACCTGGAATTCCAAGACCCATTTGGTTATTAAGTTTCCTAATACTCGAATTCTTCGTGTCATTTCTTATTCCTTGTTTTTTGCTATGGTTATTTTCACGTTTCCCTGTATTGTGTCCATTCTTGGGCAAGAAAGTGGGTCTGAGTTTTTTTCTGTGTCAGATATGGTTGATTCTGAGAAATTGAATTTGTTTTTTCGTGATTTGGGTCACGAAGGCTTGGCCTTTAACGGCCATAAGGTTCTCATTTTGAGCTCTGCTGAAACTAAGGGCTTGATTGAGATTCATGTGTTGGATGGTGATGAACACAAACTTAATATTGTTGTGGACTCTGATTTTGATAGGAGTGGGTTGTTTTCTGATGATTCTTTTGATTTTGTGTTATCTTGGGGCCTTGTGGACTCTGATTTCATTGATAGAATTTTGAAAATCGGTGGCATTGTGGCTTTTCCACTCAATAACAATGATCCATCAAATCATTTTCAAAAGAAACCAAATTACAGGCCTGTGTTTCTCAATAGATACAGCTCCACTATTGTGGCAATGGAGAAGACATCCGTGGCTGATCAGCTGGATTATGCTTCAGCTTCGAGAAGACGTCTCTTCCAATTCTCATTGCCAACTAGAAATGCAGCTTTGAGAGACATTGAGGATGTTCAACTTGAGCCACTAATTAAGGATGTGGCCGAACCAAACAAACTTGGGAGGAAAATCAAGTACCTCCCCAACGTCGTGGACGGTTTTCTCAAAGCTTCAAGGCGAAAGATCGTCACTGTTGGCCAGGATGAATGGTCCAAGTCCAATACTTTGATCAGAACTACCCAAGAAAGGATCAAGAATTTGAGGCGAGGCAGAGGTTATGGAGAAACTTATGGAAATGAGGACAATGTATTTGGTGGATGTAGTTGTTATTGGAGTGCAAGAATCAATGGTAAGAAGAAAAGCAAGAGAGAGCTTATTGGGAATGCTTGTCTTTGCAAGGCTGGTGGTGAGCATCTTCTCCTAGGCCCATTTTGGTCCTATGGTGATGCTTTGGGCCGCCACCCATCAAGAAAACCCACTCCGGCGTTTCTCCGTTCTGGTAGCAGCTCCGGCACTCACCCACCGGCGAACTCCCAGTGTCGGCCCTCACCCAACGGTTCTAAGAACGTTCATTCTTGCACAAATATGCCGTCAAAGGGAAAGAAGAACCCAAAGACACTCTCTAGATTGTCAAACTCCAGCCACTCTCCATCTCCAGTGCCACGATTGACAATACCTCCTGCCTCCGAAGTTTGTGAAGATGAGTTTCTTTCCTCTATTGAAGAAGCTTCAAGTAAATATCCTTCTTTGATTGGTAAATCTGCTTTTGTTGGGAGAGTTACTAGTGCTCCAGTTCAATCTACTGGCTGTAAAGTTTGGCTTTCTGAATCTTCTATGGTTGCTTCTAGCTTCACTCAAGGGGCTATTGTCTCGGTAGCACTTAGTTCCGAGGGAGGTAACAATTTAAAAGGCTTTCCTCTGTCCTCGTTAGCAAATGAATGCGGTAGGCACTTTGGGGTTGATCCTGGAGATTCAGTAATCCATGAAGCGGGAAATTACTTTGCTCTTGCGAGAATTTTCTCTTCTAGTAAGGAGTTAAATGATGGAGTGCAATTATCAGCAAACCTCTCGTTTACCTTGGGTTGCCCTGAAAGTGGTCGTGTGGTGTTTATCTTCCCTATAAAAGCCCACCTATGCAATGATCCATTAAATGATAATGTGGAATTGAAGAGCACAGAAGTTGAATCTCTGAGAATAATCAATTGTAAGGAACTATTCCTGGATCTATCTTGTTCATCCAATATACCAACAAAAGACAACCTATTCTCTTCTTCAACTATTTATTCAAGAAAGGTTCATGGTTATAGTGAAAATGGTAATTTAACATCCCCAAGCACCATGTTGTCTGTATCTCCTAAATGTGATGACGTGGTATCAAATTTACTTGTAGACAGTCCATGTGCTCGTTCACTTATTAAGGAGGCCTTAGAAGATGATAGTGTTAGAAAAACTCTACAGACGATTGCTTCCAATGAGTTGTATAAACGGTGTTTGCTGCTTGGTAATCTTGTAACTATCCCAGTGCTTTCAGATCTTTGTACATTTCGTGTGAGGGGTGGTAAAGGACTGTTGGGATATGATGACTCTTATAATTCTATGCACAGTGGAAGTGACGATCATTTTCAACATTTTTCATCAAATGAATATGTGGATTATGCTTTCAATATAGACCAGCTGACAAAAGTATTTATAAATGTTCAATCAACCATGGTCTCAGAGACAGTGCAAGAAAGAGTTCCATCAAATGTGGAACCTCAAAATCTAAATGTTAGAGCTAAAGTAAAGCCTAAAGTTTGGAAATTGGGTGGTCTTTCAAAAGAATATGCAGTTTTGAAGGATATTATAATTGCTTCATCATTAAATAGCATTGTGTCCAGCCTTGGTTTACGAACCACAAAGGGAGTACTTCTTCATGGTCCTCCTGGTACTGGAAAAACTTCCTTGGCTCAATTATCTGCTCATGACGCTGGTGTCAACTTATTCTATTTGAATGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAACAGGCCTTGCATGACGTTTTTGAGGTGGCAAGCCAAGCTGCACCTGCCGTGATATTAATTGATGAGTTGGATGCTATTGCGCCTGCAAGAAAGGATGGAGGTGAAGAGCTGTCTCAAAGAATTGTTGCTACATTGCTCAATCTAATGGATGGGATCAATCGAAGTGGTGGGCCACTTGTAATTGCTTCTACCAACAGACCTGATAGCATTGAGCCTGCACTAAGACGGCCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCTAACCAACGGTTGGATATTCTACATACAATACTAAGTGAAATGGAGCACTCTCTTTCAGTTGTGCAAGTTCAACATCTAGCTATGGTCACACATGGTTTTGTAGGTGCCGATTTGGCTGCCCTTTGCAATGAGGCTGCCTTAGTTTGTATAAGGCGTTATCATGAGTTTAGAGTTTCTTCTGATTGCCTTAGTTCTGGTAGATCTGTTGTAGCAGAGGAACAACACAAGTTTACTGAGGTGGATCACAAAGCCAATGTCGATCATATGATTTTGGAACCTGTTCTCTCACAAGACGCAAGAAGTAAATCAGGCGTTTACCCAAACCTTGCATCTTCGTCAATCTCTGAGCATACTTTTACATCTGACCCGCTAACATGTGTGTCCTCAAATGAAGTGGTTGCTGATAGTGAGGATATTTTAAACTCTTCCGAAATCAAGGGTAGATTGAAGGTTGTTTTTGAAGACTTTGAGGTGGCTAGAATGAAAGTGAGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAAGGTAAAATGGGAAGATATTGGTGGACAATTGGAGGTTAAGGCTCAATTAATGGAAGCAGTGGAATGGCCTCAAAAACATCAGGATGCATTCAAGCGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCTCCTGGATGTAGCAAAACCCTGATGGCACGTGCTGTAGCTTCTGAAGCAGGACTAAATTTCCTTGCAGTGAAGGGCCCAGAACTTTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCAGTTAGATCTCTGTTTGCTAAGGCAAGGGCTAATGCCCCATCAATTGTATTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGTGGGAAGGAAAGTGATGGGGTGTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAAATGGATGGTTTACATCAGAGAGTTGGTGTCACTGTCATTGCAGCTACCAATCGGCCAGATAAGATTGATCTAGCCCTCCTAAGGCCAGGACGTTTTGATCGATTGCTTTATGTTGGGCCACCAAATGAATCTGAACGAGAAGAGATATTTCGTATCCATTTGTGCAAAGTTCCTTGCAGCCCAGATGTCAGTACAAGGAAGTTGGCTTCTCTTACTCAAGGGTGTACAGGGGCTGACATATCATTAATTTGCAGAGAATCAGCTTTATTTGCCCTTGAGGAGAACCTTGAGGCTTCAAGAATAAATATGAAACATTTAGAAACTGCAGCTAGACACGTGAAGCCATCTGAAACTGAACCTTACCGAGAATTATCATCTAGGTTTCAAAGGCTTGTTTGTTCTAGCTCACAAGAAGTTAATGTCGTGTGTCAGCAGTCACGATCTAACTGGTTTTCTTTTTGGCCCCTTGTAAAATCTGCTGTGTTAGTTTTTTCTCGGGTTCGTCACATGCTTGAAGGCTTCAAATGA 4392 41.73 MDFACFNRPNSESFDNSTWNSKTHLVIKFPNTRILRVISYSLFFAMVIFTFPCIVSILGQESGSEFFSVSDMVDSEKLNLFFRDLGHEGLAFNGHKVLILSSAETKGLIEIHVLDGDEHKLNIVVDSDFDRSGLFSDDSFDFVLSWGLVDSDFIDRILKIGGIVAFPLNNNDPSNHFQKKPNYRPVFLNRYSSTIVAMEKTSVADQLDYASASRRRLFQFSLPTRNAALRDIEDVQLEPLIKDVAEPNKLGRKIKYLPNVVDGFLKASRRKIVTVGQDEWSKSNTLIRTTQERIKNLRRGRGYGETYGNEDNVFGGCSCYWSARINGKKKSKRELIGNACLCKAGGEHLLLGPFWSYGDALGRHPSRKPTPAFLRSGSSSGTHPPANSQCRPSPNGSKNVHSCTNMPSKGKKNPKTLSRLSNSSHSPSPVPRLTIPPASEVCEDEFLSSIEEASSKYPSLIGKSAFVGRVTSAPVQSTGCKVWLSESSMVASSFTQGAIVSVALSSEGGNNLKGFPLSSLANECGRHFGVDPGDSVIHEAGNYFALARIFSSSKELNDGVQLSANLSFTLGCPESGRVVFIFPIKAHLCNDPLNDNVELKSTEVESLRIINCKELFLDLSCSSNIPTKDNLFSSSTIYSRKVHGYSENGNLTSPSTMLSVSPKCDDVVSNLLVDSPCARSLIKEALEDDSVRKTLQTIASNELYKRCLLLGNLVTIPVLSDLCTFRVRGGKGLLGYDDSYNSMHSGSDDHFQHFSSNEYVDYAFNIDQLTKVFINVQSTMVSETVQERVPSNVEPQNLNVRAKVKPKVWKLGGLSKEYAVLKDIIIASSLNSIVSSLGLRTTKGVLLHGPPGTGKTSLAQLSAHDAGVNLFYLNGPEIISQYHGESEQALHDVFEVASQAAPAVILIDELDAIAPARKDGGEELSQRIVATLLNLMDGINRSGGPLVIASTNRPDSIEPALRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSVVQVQHLAMVTHGFVGADLAALCNEAALVCIRRYHEFRVSSDCLSSGRSVVAEEQHKFTEVDHKANVDHMILEPVLSQDARSKSGVYPNLASSSISEHTFTSDPLTCVSSNEVVADSEDILNSSEIKGRLKVVFEDFEVARMKVRPSAMREVILEVPKVKWEDIGGQLEVKAQLMEAVEWPQKHQDAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVIRGKESDGVSVSDRVMSQLLVEMDGLHQRVGVTVIAATNRPDKIDLALLRPGRFDRLLYVGPPNESEREEIFRIHLCKVPCSPDVSTRKLASLTQGCTGADISLICRESALFALEENLEASRINMKHLETAARHVKPSETEPYRELSSRFQRLVCSSSQEVNVVCQQSRSNWFSFWPLVKSAVLVFSRVRHMLEGFK 1463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31798550 31820425 - CePI673135_09g017100.1 Cec09g1710 212220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1710 1463 FunFam Putative vesicular transport protein (CDC48) 795 974 - -
Cec09g1710 1463 Coils Coil 1377 1397 - -
Cec09g1710 1463 Gene3D - 1329 1399 - -
Cec09g1710 1463 ProSitePatterns AAA-protein family signature. 1298 1316 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1710 1463 SMART AAA_5 841 977 IPR003593 GO:0016887(InterPro)
Cec09g1710 1463 SMART AAA_5 1192 1330 IPR003593 GO:0016887(InterPro)
Cec09g1710 1463 Pfam ATPase family associated with various cellular activities (AAA) 845 974 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1710 1463 Pfam ATPase family associated with various cellular activities (AAA) 1196 1327 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1710 1463 CDD RecA-like_CDC48_r2-like 1167 1326 - -
Cec09g1710 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1154 1403 IPR027417 -
Cec09g1710 1463 PANTHER AAA-FAMILY ATPASE 471 1417 IPR050168 GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER)
Cec09g1710 1463 FunFam spermatogenesis-associated protein 5-like protein 1 1329 1412 - -
Cec09g1710 1463 Gene3D - 975 1098 - -
Cec09g1710 1463 Pfam AAA+ lid domain 1350 1395 IPR041569 -
Cec09g1710 1463 Pfam AAA+ lid domain 999 1039 IPR041569 -
Cec09g1710 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 1030 IPR027417 -
Cec09g1710 1463 Gene3D - 1153 1400 IPR027417 -
Cec09g1710 1463 MobiDBLite consensus disorder prediction 366 436 - -
Cec09g1710 1463 CDD RecA-like_CDC48_NLV2_r1-like 810 973 - -
Cec09g1710 1463 Gene3D - 791 974 IPR027417 -
Cec09g1710 1463 MobiDBLite consensus disorder prediction 372 429 - -
Cec09g1710 1463 FunFam calmodulin-interacting protein 111 isoform X1 1153 1328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0597 Cec-Chr9:5212782 Cec09g1710 Cec-Chr9:31798550 4.70E-56 dispersed
Cec09g1710 Cec-Chr9:31798550 Cec10g2026 Cec-Chr10:35041260 2.10E-119 dispersed
Cec09g1710 Cec-Chr9:31798550 Cec04g1067 Cec-Chr4:30208441 3.20E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1710 - - - 0.0