Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1744 ATGCCGGACTCCAATTTCCAAGACACGATGTACGGTTCCGGAGTCATGAACAACGGTGGCCGGGATTTGGATAGCATTCAGAACAGAGTTGGCGATGAAGATGACGACATTAACGGCGGGGAAGAGTCCATAGATAATCCTCAGATGCGCTTCGAAGACTCTGGGGGAATGAGCGGCTCGGTCTCGGTAATGAACCGAGTCCAGGACGTTGTTCCTTCGACGTATGTTTCCAGCTCTGATTACAACCCTTTGACTGGAAACGGCGGTGCTGACCAACTTACGCTGTCGTTCCGAGGGGAGGTTTACGCTTTTGACTCTGTGTCACCGGACAAGGTGCAAGCGGTGCTTTTGCTTTTAGGTGGATATGAAATTCCTTCTGGTATTCCTGCAGTTGGAAGTGTTCCCATCAACCAGCAGGGTACCGATGGCTTTCCTGTCAGGTTAGTTCAACCACAAAGAGCTGCTTCATTGAGTAGATTTAGAGAGAAGAGAAAAGAAAGGTGTTTCGAGAAGAAAATTCGTTACAGTGTGCGAAAAGAAGTTGCGCTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCCATTGGAGATGAAGTGGGCTCATCTTCAGTTTTGTCTCAGACGTTGGATTCTGGACAAGATGATGGCTTGTTGGAAACCTCATGTACCCATTGTGGAACCAGTTCGAAATCTACTCCAATGATGCGTCGTGGGCCTGCTGGGCCAAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCCAATAAGGGAATCTTGAGGGATCTTTCCAAGGTTTCAAACACTGGCATCCAAGAACCCTCTGTGAAAGAGACTCAACAGAGCGACGGCGAAGCTGCTAATGAATCTGATCCTGCAATTAATGTGGATATTCTCACTTCTAATGGTGATAAATAG 924 48.05 MPDSNFQDTMYGSGVMNNGGRDLDSIQNRVGDEDDDINGGEESIDNPQMRFEDSGGMSGSVSVMNRVQDVVPSTYVSSSDYNPLTGNGGADQLTLSFRGEVYAFDSVSPDKVQAVLLLLGGYEIPSGIPAVGSVPINQQGTDGFPVRLVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGIQEPSVKETQQSDGEAANESDPAINVDILTSNGDK 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32728035 32733832 + CePI673135_09g017440.1 Cec09g1744 212254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1744 307 MobiDBLite consensus disorder prediction 267 307 - -
Cec09g1744 307 Pfam GATA zinc finger 225 260 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g1744 307 MobiDBLite consensus disorder prediction 1 58 - -
Cec09g1744 307 MobiDBLite consensus disorder prediction 1 24 - -
Cec09g1744 307 ProSitePatterns GATA-type zinc finger domain. 225 252 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g1744 307 ProSiteProfiles Tify domain profile. 86 121 IPR010399 -
Cec09g1744 307 ProSiteProfiles CCT domain profile. 153 195 IPR010402 GO:0005515(InterPro)
Cec09g1744 307 CDD ZnF_GATA 224 274 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g1744 307 SMART tify_2 86 121 IPR010399 -
Cec09g1744 307 Pfam CCT motif 153 195 IPR010402 GO:0005515(InterPro)
Cec09g1744 307 Gene3D - 221 286 IPR013088 GO:0006355(InterPro)|GO:0008270(InterPro)
Cec09g1744 307 ProSiteProfiles GATA-type zinc finger domain profile. 224 276 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Cec09g1744 307 PANTHER GATA TRANSCRIPTION FACTOR 28 38 292 IPR045280 GO:0006355(InterPro)
Cec09g1744 307 Pfam tify domain 90 120 IPR010399 -
Cec09g1744 307 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 271 - -
Cec09g1744 307 SMART GATA_3 219 272 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1191 Cec-Chr8:23828833 Cec09g1744 Cec-Chr9:32728035 1.40E-58 dispersed
Cec09g0164 Cec-Chr9:1428925 Cec09g1744 Cec-Chr9:32728035 2.10E-56 dispersed
Cec09g1744 Cec-Chr9:32728035 Cec01g1751 Cec-Chr1:32095505 4.20E-06 dispersed
Cec09g1744 Cec-Chr9:32728035 Cec05g0755 Cec-Chr5:6241107 5.50E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30258 PF06203 CCT 1.60E-15 CL0281 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1744 - - - 0.0