Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1794 ATGGCTGCCCCAATCCCCATTTTCATTTTTCTTCTTCCTCTGGTATTCTCTGCACTTACACTTTCAAGTTCTTTATCTTTCAACTTCACCTCTTTCGATTCAAGTAATACCCACATCTTCTACGAGAGAGCATTCCCATCAAATCGAACAATCAAACTCACAGGAGAAAGGGTTAATAGTAACCAAAATTTCTCTGCACGAGCAACTTACTTCAAGCCCTTGCATCTTTGGGACAAAGCCTCTGGGAATCTTTCAAGTTTCCGAACTCATTTCTCCTTCGCCATTGATTCAGAAGGAGCAGAAAGGTACGGAGATGGGCTTACATTCTTCTTTGCTCCTAATAATTCTAGGCTTGATGATGAGATCTCAAAGGGCAGTGGATTGGGGATTGGGTTTAACCCCAGTTTGACAAATTTAACATATAGTTCCTTTTTTGCAGTTGAGTTTGATATCTTTAGCAATTACTTTGATCCACCTGAAAAACTAGAACATGTAGGTATTGATATCAATTCAATGGCTTCTGTTGCTTATTCAGTATGGAAATGTGATATTAGGAGAGGGAAGAGGACTGATGTTTGGATTAATTATGATTCTGTTACTTTGAATTTGAGTGTTACTTTCACTGGGTATGATGAGAATAATAAAACTATATTGCAGAAACTTAACCATGATGTAAACTTTAGGTTGACTCTACCTGAATGGCTTGGTGAAGGAGGATTTGGTGGTGTCTATAGAGGTTTCTTAAGGGACTTAAATTGCTATGTCGCTGTGAAGAAAGTATCAAAAGGGTCTAGACAAGGACTAAAAGAGTATGCATCTGAGGTGAAAATCATTAGCCAATTGAGACATAGAAACTTAGTGCAACTCTTGGGTTGGTGTCATGAAAGAGGTGAGCTTTTGCTGGTTTATGAATTCATGTCAAATGGAAGCTTAGATGCCCATCTTTTCAAAGAAAACAACTTCTTAACATGGGAATTTCGATACAAAGTTGCTCGAGGTATTGCCTCGGCTCTGCTATATCTACATGAAGAGTGGGAAAAATGTGTGCTGCATCGAGATATAAAGTCAAGCAATGTAATGTTGGATTCAGATTTCAATGCAAAGCTTGGAGATTTTGGGTTGGCTAGGCTAGTGGACCATGCCATAGGTTCACAAACAACAGTTCTTGCTGGAACAATGGGCTACATGGCTCCTGAATGTGCTACAACAGGAAGGGCCAGTAAGGAATCAGATGTATTCAGCTTTGGGATTGTGGCTTTGGAAATTGCTTGTGGAAGAAGACCCTTTAATCCCAATGTAGAGGAAGGCAAAATGGTGATGGTAGAGTGGGTTTGGAAACTTTATGGCCATGGAAGACTTCTTGAAGCAGCCGACTCGAAACTCCATGGAAGCTTGGAGGATGAACCGCAGCAGCAACAACAGATTGAGTGTTTGATGGTTGTTGGAGACTACATCTTCTTCAACTTCTTTTTCTGCATCAACTTCACTTTTGAATACACGGTTGATTCCACTAGAGCTTGTACCCTTGTCAAAGCCTATTATTTTGTTGGCAAGGCAAAACCAACTTGA 1569 40.09 MAAPIPIFIFLLPLVFSALTLSSSLSFNFTSFDSSNTHIFYERAFPSNRTIKLTGERVNSNQNFSARATYFKPLHLWDKASGNLSSFRTHFSFAIDSEGAERYGDGLTFFFAPNNSRLDDEISKGSGLGIGFNPSLTNLTYSSFFAVEFDIFSNYFDPPEKLEHVGIDINSMASVAYSVWKCDIRRGKRTDVWINYDSVTLNLSVTFTGYDENNKTILQKLNHDVNFRLTLPEWLGEGGFGGVYRGFLRDLNCYVAVKKVSKGSRQGLKEYASEVKIISQLRHRNLVQLLGWCHERGELLLVYEFMSNGSLDAHLFKENNFLTWEFRYKVARGIASALLYLHEEWEKCVLHRDIKSSNVMLDSDFNAKLGDFGLARLVDHAIGSQTTVLAGTMGYMAPECATTGRASKESDVFSFGIVALEIACGRRPFNPNVEEGKMVMVEWVWKLYGHGRLLEAADSKLHGSLEDEPQQQQQIECLMVVGDYIFFNFFFCINFTFEYTVDSTRACTLVKAYYFVGKAKPT 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33667897 33674443 + CePI673135_09g017940.1 Cec09g1794 212304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1794 522 CDD lectin_legume_LecRK_Arcelin_ConA 27 247 IPR001220 GO:0030246(InterPro)
Cec09g1794 522 Pfam Legume lectin domain 24 233 IPR001220 GO:0030246(InterPro)
Cec09g1794 522 Gene3D Transferase(Phosphotransferase) domain 1 307 483 - -
Cec09g1794 522 SMART serkin_6 229 478 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1794 522 ProSiteProfiles Protein kinase domain profile. 229 487 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1794 522 PANTHER - 55 219 IPR050528 GO:0005886(PANTHER)
Cec09g1794 522 Gene3D Phosphorylase Kinase; domain 1 235 306 - -
Cec09g1794 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1794 522 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 235 IPR013320 -
Cec09g1794 522 FunFam Lectin-domain containing receptor kinase A4.3 306 487 - -
Cec09g1794 522 Gene3D - 22 210 - -
Cec09g1794 522 SUPERFAMILY Protein kinase-like (PK-like) 228 469 IPR011009 -
Cec09g1794 522 Pfam Protein kinase domain 233 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1794 522 ProSitePatterns Protein kinases ATP-binding region signature. 235 259 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1794 Cec-Chr9:33667897 Cec10g0822 Cec-Chr10:15354433 1.10E-123 dispersed
Cec09g1793 Cec-Chr9:33662286 Cec09g1794 Cec-Chr9:33667897 4.50E-32 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72274 PF00069 Pkinase 4.20E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1794 - - - 0.0