Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1825 ATGGAAGCTTCTCTGTATACATTTTCAATGCTAACTCACCTCTTTCTCCTCCTTCCCTATCTTTCTCTCTTAGTTGACTCAGTTTCTTTCAAAATTGATCAATTCAAGCCAACTGAAACTCGATTACTCTACCAAGGAGATGCTGTTCCTACTAATGGAGCAGTTATGTTTAGTGATCCTGCATATTCCTGTCTTGTTGGACAAGCTATTTACAAAGATGCTATCCCAATTTGGGACTCTGAAACAGGAAAACTCACTGATTTCACAACCCATTTCTCCTTCACCATTGATACTCAACATGCTTCACACTATGGCAATGGAGTTGCTTTTTTCTTGGCTCCAGCTGGGTTTCATATCCCTCCAAATTCAGCTGGTGGGTTTCTTGGCCTTTTCAATAAGACCTACGCTGATTCATCCATAAACCAAATCCTTCATGTTGAGTTTGATTCTTACTCTAATGAATGGGATCCTAAATTTGAACATGTGGGTATCAATATTAACTCTGTTTCTTCCTCCAATTTCACAAAGTGGAATGTCAGCTTACATAGTTTAGACACTGTTGATGTGTTTATCTCCTATGATTCAACCACCAAATACTTGAGTGTCTCATGGATTAATGAAAAGACAGCAACTTCTCTTGAAAATACAACTTTGAGTTACCAGATTGATCTCATGAAGATTCTTCCTCAATGGGCAACGGTAGGATTTTCAGCTGCAACAGGGGCATATTTAGAGAGACATTTGCTATTTTCTTGGGAGTTTAACTCCAGTTTAGAAATGAAACAACCAGCTAGTACTGAAAAGAGTGGGAATAAAGTTGATGTAATTGTGGGTGTGACTGTTTCAATAGGAGTTTCAATTTTAATAGCAATTGTAGCCTTTGTAGTACTTTGGAGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTAGCAAGCTTCTTGCCATGGCAACCAATAACTTCTCAAATGAAAGGAAGCTAGGGGAAGGTGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTCCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATATCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCGTTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTGGATTCAAACTTCAATGTCAAGCTTGGGGATTTTGGGTTAGCTAGATTAATGGACCATGAGTTGGGAGCTCAAACAACTGGGTTGGTTGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACTGGAAGAATGTCAAGAACCTCCATGGAAACAGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGATTGATGGCATGGATGAGAAATTGCAATCTGATTGTGACAAAAAACAAGTGGAATGTTTGATGCTTGTTGGACTATGGAGTGCTTATCCAGATCCTAATCTTAGACCTTCCATAAAACAAGCAATCCAAGTTCTTAACTTTGAGACAACGATGCCAAATCTTCCAAATAAAATGCCTGTTCCTATATATCCTGCTCCTCCCACGTCAATGAGCTCAAATGAAGCTTCCATTACTGTAAGTCTTGACATGGGTCGTTGA 1965 39.75 MEASLYTFSMLTHLFLLLPYLSLLVDSVSFKIDQFKPTETRLLYQGDAVPTNGAVMFSDPAYSCLVGQAIYKDAIPIWDSETGKLTDFTTHFSFTIDTQHASHYGNGVAFFLAPAGFHIPPNSAGGFLGLFNKTYADSSINQILHVEFDSYSNEWDPKFEHVGININSVSSSNFTKWNVSLHSLDTVDVFISYDSTTKYLSVSWINEKTATSLENTTLSYQIDLMKILPQWATVGFSAATGAYLERHLLFSWEFNSSLEMKQPASTEKSGNKVDVIVGVTVSIGVSILIAIVAFVVLWRLKQKKRKSEEEKSEEVNLTSINDDLERGAGPRRFSSKLLAMATNNFSNERKLGEGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHIFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMETESHKGLVEWVWDLYGSGQLIDGMDEKLQSDCDKKQVECLMLVGLWSAYPDPNLRPSIKQAIQVLNFETTMPNLPNKMPVPIYPAPPTSMSSNEASITVSLDMGR 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34447772 34449736 + CePI673135_09g018250.1 Cec09g1825 212335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1825 654 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1825 654 CDD STKc_IRAK 351 615 - -
Cec09g1825 654 Gene3D - 25 272 - -
Cec09g1825 654 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Cec09g1825 654 Pfam Protein kinase domain 346 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1825 654 CDD lectin_legume_LecRK_Arcelin_ConA 28 258 IPR001220 GO:0030246(InterPro)
Cec09g1825 654 FunFam L-type lectin-domain containing receptor kinase IX.1 330 421 - -
Cec09g1825 654 Pfam Legume lectin domain 28 268 IPR001220 GO:0030246(InterPro)
Cec09g1825 654 FunFam L-type lectin-domain containing receptor kinase IX.1 26 267 - -
Cec09g1825 654 FunFam Lectin-domain containing receptor kinase A4.3 422 634 - -
Cec09g1825 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 260 IPR013320 -
Cec09g1825 654 SMART serkin_6 345 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1825 654 ProSitePatterns Protein kinases ATP-binding region signature. 351 375 IPR017441 GO:0005524(InterPro)
Cec09g1825 654 PANTHER - 45 624 IPR050528 GO:0005886(PANTHER)
Cec09g1825 654 SUPERFAMILY Protein kinase-like (PK-like) 329 639 IPR011009 -
Cec09g1825 654 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Cec09g1825 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1825 Cec-Chr9:34447772 Cec09g1829 Cec-Chr9:34496727 2.60E-308 dispersed
Cec09g1825 Cec-Chr9:34447772 Cec09g1827 Cec-Chr9:34481378 8.90E-23 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72275 PF00069 Pkinase 9.70E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1825 - - - 0.0