Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1828 ATGCATTTCTCTCTGATCGTGGGATTCAATTCAGCCACTCCATTTATCATTGCCAACTTTCACAGTGGAGACACTGCTGATGTGTGGATCTCCTACAATTCAACCACCAAAAATTTTACTGTCTCATGGAAATGGAAATCCACCTCGAATTCATTTGAAGATACCACCTTGAGTTATAAGATTGATTTAACCACGATTCTTCCTCAATGGGCGGTGGTGGGATTTGCAGGGGCAACAGGAACAAACTTCGAGAGACATACTCTGTTTTCATGGGAGTTCAACTCGAGCTTGGATATAAAGCAAACAATAATGTGTAAATTGAAACAGAGGAAGAAAACAGGGGAGGAAGTAAATTTGACAAGCATGAACCAAGATTTGGAAAGAGAAGCTGGACCCAGAAGGTTTTCTAGCAAGCTTCTTGCCATGGAAACCAATAACTTCTCAAATGAAAGGAAGCTAGGGGAAGGAGGATTTGGAGCAGTGTACAGAGGGTATATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTCCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATATCTTTGGTAAGAGAACTCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCATTGCTATATCTCCATGAAGAATGGGAACAATGTGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTAGATTCAAATTTCAATGCTAAATTGGGAGATTTCGGTCTAGCTCGATTAATGGACCATGAGTTGGGTGCTCAAACAACTAGGCTCGCAGGGACTTTTGGTTATTTAGCCCCTGAATATGTAACCACAGGCAGAGCTAGTAAAGAATCTGATATCTTTAGTTTTGGGGTCGTAGCTTTGGAGATTGCTACAGGAAGAATGTCAAGAACTTGCATTGATCAAGATGAATCTTACAAAGGATTAGTAGAATCAGTTTGGGATCTCTATGAAAGTGGGCAACTGCTAGTGGGGATGGATGAGAAATTGCAATCTAAGTATGATGAAAGAGAGGCTTAA 1170 40.68 MHFSLIVGFNSATPFIIANFHSGDTADVWISYNSTTKNFTVSWKWKSTSNSFEDTTLSYKIDLTTILPQWAVVGFAGATGTNFERHTLFSWEFNSSLDIKQTIMCKLKQRKKTGEEVNLTSMNQDLEREAGPRRFSSKLLAMETNNFSNERKLGEGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHIFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARLMDHELGAQTTRLAGTFGYLAPEYVTTGRASKESDIFSFGVVALEIATGRMSRTCIDQDESYKGLVESVWDLYESGQLLVGMDEKLQSKYDEREA 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34489113 34490720 + CePI673135_09g018280.1 Cec09g1828 212338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1828 389 FunFam L-type lectin-domain containing receptor kinase IX.1 132 223 - -
Cec09g1828 389 ProSitePatterns Protein kinases ATP-binding region signature. 153 177 IPR017441 GO:0005524(InterPro)
Cec09g1828 389 Pfam Protein kinase domain 148 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1828 389 Gene3D Phosphorylase Kinase; domain 1 132 223 - -
Cec09g1828 389 Pfam Legume lectin domain 17 102 IPR001220 GO:0030246(InterPro)
Cec09g1828 389 SUPERFAMILY Protein kinase-like (PK-like) 126 355 IPR011009 -
Cec09g1828 389 PANTHER - 19 388 IPR050528 GO:0005886(PANTHER)
Cec09g1828 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1828 389 SMART serkin_6 147 385 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1828 389 Gene3D Transferase(Phosphotransferase) domain 1 224 389 - -
Cec09g1828 389 Gene3D - 5 119 - -
Cec09g1828 389 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 167 IPR013320 -
Cec09g1828 389 ProSiteProfiles Protein kinase domain profile. 147 389 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1828 389 FunFam Lectin-domain containing receptor kinase A4.3 224 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1828 Cec-Chr9:34489113 Cec10g0822 Cec-Chr10:15354433 3.20E-112 dispersed
Cec09g1828 Cec-Chr9:34489113 Cec09g1829 Cec-Chr9:34496727 1.60E-172 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72276 PF00069 Pkinase 2.50E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1828 - - - 0.0