Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1829 ATGGCTACTTCCTCCTATGTCTTTCCAATGTCAAGTCATCTCCTTTTCCTTCTCCTTCTTCTTTCCTTTCTTCCTCCCTCCATTCACTCAATTTCTTTCCAAATAGATCGGTTCAAGACCAATGAAAGTGATGCACTTTACCAAGGAGATTCTCTTCCTTCAGTTGGATCAGTTGAATTCAACAATGTTAATTATCTTTGTAGAGTTGGTTGGATTATCTACAAAGACATTGTGCCAATTTGGGACTCTAAAACAGGAAAAACCACTGATTTTACAACCCACTTCACCTTCTTAATAGATACCCAAAATGCTCAAAACTATGGCCATGGAATAGCTTTCTTTCTAGCTCCAATTGGGTTCCAAATCCCTCCAAACTCAGCTGGTGGCTTTCTTGGCCTTTTCAACACCACAAATAGTGATTCAACCATCAATCAAATTGTTCATGTTGAATTTGATTCTTTCTCCAATCAAGAATGGGATCCTCCATATGAACATGTGGGCATAAATGTTAACTCCATTGCTTCTTCTAATTACACTCGTTGGAATGCTAGTTTACATAGTGGAGATATTGCTGATGTGTGGATCTCCTATAATTCAACTACAAAAAACTTGAGTGTTTGGTGGAAGTACCAAAGTGGGTCAAATTCTTCTGAGGATACAACTCTAAATTACCAAATTGATCTCATGAAGGTTCTTCCTCAATGGGCTGCAATAGGATTTTCAGCTGCAACTGGAATGTATGTAGAGAGACATACATTATTTTCATGGGAATTCAACTCCACCTTGGATGTAAACAAAGCAAGCGAAGATCATGGGAATAAAGTTAATGTAATTGTGGGTGTGACTGTTTCAATAGGAGTTTCAATTCTCATAGCAATTGTAGCCTTTGTAGTACTTTGGGGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTAGCAAGCTTCTTGCCATGGCAACCAATAACTTCTCAAATGAAAGGAAGCTAGGGGAAGGTGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTCCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATATCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCGTTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTGGATTCAAACTTCAATGTCAAGCTTGGGGATTTTGGGTTAGCTAGATTAATGGACCATGAGTTGGGAGCTCAAACAACTGGGCTGGTTGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACTGGAAGAATGTCAAGAACCTCCATGGATACAGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGATTGATGGCATGGATGAGAAATTGATGAAGTCTGATTATGACCAAAAACAAATAGAGTGTTTGATGCTTGTTGGACTTTGGAGTGCTTATCCTGACCCTAATTTAAGACCTTCAATAAGACAAGTAATTCAAGTTCTTAATTTTGAGACAACAATGCCAAATCTTCCAAGTAAAATGCCTGTTGCTGTGTATCATGCTCCTTCCACATCAATGAGCTCAAATGAACCAACAATTACTGCAAGTCTTGATGTGGGTCGTTGA 1974 39.51 MATSSYVFPMSSHLLFLLLLLSFLPPSIHSISFQIDRFKTNESDALYQGDSLPSVGSVEFNNVNYLCRVGWIIYKDIVPIWDSKTGKTTDFTTHFTFLIDTQNAQNYGHGIAFFLAPIGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPYEHVGINVNSIASSNYTRWNASLHSGDIADVWISYNSTTKNLSVWWKYQSGSNSSEDTTLNYQIDLMKVLPQWAAIGFSAATGMYVERHTLFSWEFNSTLDVNKASEDHGNKVNVIVGVTVSIGVSILIAIVAFVVLWGLKQKKRKSEEEKSEEVNLTSINDDLERGAGPRRFSSKLLAMATNNFSNERKLGEGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHIFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMDTESHKGLVEWVWDLYGSGQLIDGMDEKLMKSDYDQKQIECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPNLPSKMPVAVYHAPSTSMSSNEPTITASLDVGR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34496727 34498700 - CePI673135_09g018290.1 Cec09g1829 212339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1829 657 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Cec09g1829 657 CDD STKc_IRAK 353 618 - -
Cec09g1829 657 SMART serkin_6 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1829 657 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Cec09g1829 657 FunFam L-type lectin-domain containing receptor kinase IX.1 29 271 - -
Cec09g1829 657 Gene3D - 28 286 - -
Cec09g1829 657 Pfam Legume lectin domain 31 269 IPR001220 GO:0030246(InterPro)
Cec09g1829 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1829 657 SUPERFAMILY Protein kinase-like (PK-like) 327 620 IPR011009 -
Cec09g1829 657 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524(InterPro)
Cec09g1829 657 FunFam Lectin-domain containing receptor kinase A4.3 424 637 - -
Cec09g1829 657 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1829 657 PANTHER - 57 627 IPR050528 GO:0005886(PANTHER)
Cec09g1829 657 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1829 657 CDD lectin_legume_LecRK_Arcelin_ConA 31 262 IPR001220 GO:0030246(InterPro)
Cec09g1829 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Cec09g1829 657 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1825 Cec-Chr9:34447772 Cec09g1829 Cec-Chr9:34496727 2.60E-308 dispersed
Cec09g1829 Cec-Chr9:34496727 Cec10g0822 Cec-Chr10:15354433 9.50E-181 dispersed
Cec09g1827 Cec-Chr9:34481378 Cec09g1829 Cec-Chr9:34496727 4.10E-20 proximal
Cec09g1828 Cec-Chr9:34489113 Cec09g1829 Cec-Chr9:34496727 1.60E-172 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72277 PF00069 Pkinase 1.20E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1829 - - - 0.0