Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1882 ATGGTTTCTCGGAGAAAGAGAGCCGGAGGAGGCGGTGCCGTCGCCGAGCTTCCTGCTCCAGGTTACGAGCAGCTTAGGGATCAAAGGGTTAGGGAAAATCTAGAGAGGATGCAGAAACTTGGCATTATCGAACTTTCTCTCAAGCTTAAGTCCACCGCCACCGCCGCTCCAAAACGATTTCCCAAAAGTTGTTTTCAGAAGGAACCGCCGAACGGGTCCCCTGCCGACGAACCCCAGAGGCGCTCTTCGAGGTTGAAGACATTGACTCCAGTTAGCTACGCAGAGATCGGTCCTAAATCTAGAAGGGCAACTTCTAAAAGTAATGAGATTCACATAAAAGAAGGCTCGCAACCAGAAATTTACACAGAAGAAGATGCCAAGCTGTTGGGAGATTGTGAATCAAAGTGGATTCTTGGTGTGGATGGATATGGCCAGGATGGGAAGCGTGTGTATGATGCTGTTAATGGAGAGTCGTGTCATCAATGCAGGCAGAAGACTCTTGGTCACCATACACACTGCAGCAAGTGTAAATTAGGCCAGGGGCAATTTTGTGGCGATTGCTTGTACACACGATATGGAGAGAATGTGATGGAAGTTAATTTGAATCCCAACTGGATCTGCCCAGTATGTCGAGGTATTTGCAACTGCAGTTTGTGTCGACAATTGAAAGGATGGATGCCGACTGGTGCTATATATAGAAAGGCCCATAGTTTGGGTTTCAAGTCTGTGGCACATTATCTCATTCAAACCCGGTGCAATCAGACGAACCAGAAAAGCTCAACTTCAGAACATTGA 795 47.42 MVSRRKRAGGGGAVAELPAPGYEQLRDQRVRENLERMQKLGIIELSLKLKSTATAAPKRFPKSCFQKEPPNGSPADEPQRRSSRLKTLTPVSYAEIGPKSRRATSKSNEIHIKEGSQPEIYTEEDAKLLGDCESKWILGVDGYGQDGKRVYDAVNGESCHQCRQKTLGHHTHCSKCKLGQGQFCGDCLYTRYGENVMEVNLNPNWICPVCRGICNCSLCRQLKGWMPTGAIYRKAHSLGFKSVAHYLIQTRCNQTNQKSSTSEH 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35606598 35610549 + CePI673135_09g018820.1 Cec09g1882 212392

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1882 264 MobiDBLite consensus disorder prediction 1 23 - -
Cec09g1882 264 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 151 247 IPR018866 -
Cec09g1882 264 PANTHER OS05G0300700 PROTEIN 20 261 IPR040221 GO:0005634(PANTHER)|GO:0006355(InterPro)
Cec09g1882 264 MobiDBLite consensus disorder prediction 58 86 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1882 K23408 - - csv:101222916 357.066
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1383 Cec-Chr2:30898306 Cec09g1882 Cec-Chr9:35606598 3.60E-82 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g501 . . . . . . . . . . Cma02g00432 . Car02g00287 . . . . . . . . . . . . . . . . . . . . . . Lsi10g00320 . Chy11g00426 . . . . . . . . . . Cmo02g00434 . . . . . . Cpe05g01230 . . . . . . . Cla09g01728 Cam09g1822 Cec09g1882 Cco09g1975 . . Cre01g0686 . Csa02g01209 . Cme11g00249
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013673 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 26