Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1942 ATGGCGGAACCAGCAGCAGAGCCTAAGGCATTACCCGAACCCGAAAAGAAGAAGGAACAGAGCCTTCCTTTTTACCAACTCTTCTCTTTTGCAGACAAATATGACTGGTTTCTCATGATCCTCGGTAGTTTCGGCGCCATTGTCCACGGCTCTTCCATGCCTGTTTTTTTCCTTCTTTTCGGCGAAATGGTTAACGGCTTCGGCAAAAACCAATCCAATTTTCACAAAATGACAGCAGAAGTCTCTAAGTATGCTCTGTATTTTGTCTACTTGGGTCTCATTGTCTGTTTCTCATCCTACGCCGAGATCGCATGTTGGATGTACACAGGGGAGAGGCAAGTGAGTACATTGAGAAAGAAGTATTTAGAAGCTGTTTTGAAACAAGATGTTGGATTCTTCGACACTGACGCCAGAACAGGGGATGTTGTTTTCAGTGTTTCAACAGACACTCTTCTTGTACAAGATGCAATCAGCGAGAAGGTGGGGAACTTCATTCACTATCTTTCGACGTTTTTAGCTGGATTGGTTGTGGGTTTTGTGTCAGCATGGAGACTAGCTCTTCTGAGTATAGCAGTAATTCCAGGAATCGCTTTTGCTGGTGGTTTATATGCTTATACTCTCACTGGACTTACTTCAAAGAGTCGAGAATCCTATGCCAATGCTGGCATAATTGCCGAACAGGCGATTGCTCAAGTTCGAACTGTTTACTCTTATGTTGGAGAAAGCAAAGCCCTGAATTCCTATTCAGATTCAATTCAAAACACATTGAAAATTGGTTACAAGGCAGGAATGGCTAAGGGGTTGGGTCTAGGTTGTACCTATGGCATTGCTTGTATGTCTTGGGCACTTGTCTTCTGGTATGCTGGAGTCTTCATCCGGAACGGCCAGTCCGATGGCGGCAAAGCCTTCACTGCTATATTCTCCGCCATCGTCGGTGGCATGAGCTTGGGGCAGTCATTTTCCAATTTGGGAGCATTCAGCAAAGGGAAAGCAGCAGGGTACAAATTGATGGAGATTATCAAACAGAGGCCTACAATTATTCAAGACCCATTAGATGGGAAATGTTTGGGTGAAGTTAATGGCAACATTGAGTTCAAAGATGTCACCTTTAGCTATCCATCCAGGCCGGACGTGATGATCTTTAGGGATTTCTCCATTTTTTTCCCTGCTGGGAAGACGGTGGCTGTCGTTGGTGGTAGCGGTTCCGGGAAAAGCACTGTTGTCTCTCTCATTGAAAGATTCTACGATCCCAATCAAGGGCAGGTTTTACTAGACAATGTAGACATCAAGACACTGCAATTGAAATGGCTAAGAGATCAAATTGGTCTAGTGAATCAGGAACCGGCTCTGTTTGCAACCACCATATACGAAAACATTCTCTACGGAAAACCCGATGCGACGATGGCGGAGGTGGAAGCTGCTGCGGCTGCAGCCAACGCTCATAGCTTCATCACATTGCTCCCCAATGGCTACGACACCCAAGTGGGCGAAAGAGGATTACAACTCTCCGGTGGACAAAAACAGAGGATTGCCATAGCCAGAGCAATGTTGAAGAACCCCAAAATCCTTCTCCTCGATGAAGCCACCAGCGCACTCGATGCAGGCTCTGAGAGCATAGTTCAAGAAGCTTTAGACCGTTTAATGGTCGGAAGAACAACAGTGGTGGTTGCACATCGATTATCAACAATAAGAAATGTCGATTCAATTGCAGTTATACAACAGGGGCAGGTAGTCGAAACAGGAACTCACGAAGAACTAATCGCTAAATCCGGTGCTTATTCCTCGTTAATCCGATTCCAAGAAATGGTTCGAAATAGAGAATTCTCAAACCCATCGACCCGTCGAACACGATCTTCACGACTGAGTCATTCGTTATCGACAAAATCGTTAAGCCTCCGCTCCGGCAGCCTCAGGAATTTGAGTTATTCGTATAGCACCGGCGCCGATGGGAGAATCGAAATGGTCTCAAACGCCGAAACTGACAGGAAAAACCCAGCCCCCGATGGCTATTTCATTCGTCTTCTTAAACTGAACGGCCCCGAATGGCCGTATTCGATAATGGGCGCTGTTGGGTCTGTTCTCTCTGGTTTCATCAGTCCAACATTTGCCATTGTTATGAGTAACATGATCGAGGTCTTCTATTACAGAAATTCATCCGCCATGGAAAGGAAAATCAAGGAATTCGTATTCATCTACATTGGAATTGGGGTTTACGCAGTGGTAGCTTATCTAATTCAGCATTATTTCTTTACAATCATGGGTGAGAATCTCACTACCAGGGTCAGAAGAATGATGCTCGCAGCGATTTTGAGGAATGAAGTGGGATGGTTCGATGAAGAAGAACACAACTCAAGTTTAGTAGCAGCAAGATTGGCTACTGATGCAGCTGATGTAAAATCCGCCATTGCTGAAAGAATATCAGTGATACTACAAAATATGACTTCACTCTTCACTTCTTTCATAGTTGCATTCATTGTTGAATGGAGAGTTTCGCTTCTCATCCTTGCAGCCTTCCCTCTACTGGTTCTTGCCAACATGGCTCAGCAACTTTCTTTAAAAGGATTTGCTGGGGATACTGCTAAGGCCCACGCAAAGACAAGTATGATTGCAGGGGAAGGTGTGAGTAATATCAGAACAGTGGCTGCCTTCAATGCTCAAGACAAGATCCTTTCTCTGTTCCGCCACGAGCTTCGTGTCCCACAACGACAGAGTCTCCGCCGGAGCCAAACAGCAGGTGTTCTTTTTGGTATCTCGCAGCTAGCTCTATATGCCTCTGAAGCTTTAGTTCTATGGTATGGTGTCCATTTGGTCAGCAATGGTGGATCAACATTCTCCAAAGTGATCAAAGTCTTTGTTGTCTTGGTTGTTACTGCCAATTCTGTGGCGGAGACTGTTAGTCTTGCTCCCGAGATCATTAGAGGTGGCGAATCAATTGGTTCTGTTTTCTCAATTCTCGATCGCCCGACGAGGATCGACCCTGATGATCCTGAGGCAGAGACTGTTGAGACACTGCGTGGGGAAATTGAACTCCGACATGTTGACTTCGCATACCCGTCTCGACCTGATGTCATGGTGTTTAAGGATCTCAATTTGAGGATCAGGGCTGGTCAGAGCCAGGCATTGGTTGGAGCCAGTGGATCAGGGAAGAGTTCAGTGATTGCTTTGATTGAGAGATTCTATGATCCGCTTGCCGGGAAAGTTATGATCGACGGGAAGGACATTCGACGCCTGAACTTGCAATCCTTGAGGCTGAAAATTGGTTTGGTACAGCAAGAGCCAGCCTTATTTGCAGCCAGCATTTTTGACAATATTGCATATGGAAAAGATGGAGCAACAGAGGCAGAAGTAATAGAGGCAGCAAGAGCAGCCAATGTGCATGGCTTTGTAAGTGGACTTCCTGATGGCTACAAGACACCAGTTGGGGAAAGAGGCGTTCAACTCTCTGGTGGCCAAAAACAACGCATAGCTATTGCCAGAGCCGTTCTCAAGGACCCCACAATCCTCCTTCTCGATGAAGCTACCAGTGCCCTCGACGCCGAGTCCGAGTGTGTGCTGCAAGAAGCTCTCGAAAGGCTCATGAGGGGTCGGACCACGGTGGTCGTGGCGCATCGCCTGTCCACAATCAGGGGTGTGGACTGCATTGGCGTGGTCCAAGACGGTCGCATTGTCGAGCAAGGCAGCCATAATGAGCTGCTAAGCCGAGCCGAGGGGGCTTACTCAAGGCTCTTGCAGCTGCAACACCAACACATATGA 3753 46.76 MAEPAAEPKALPEPEKKKEQSLPFYQLFSFADKYDWFLMILGSFGAIVHGSSMPVFFLLFGEMVNGFGKNQSNFHKMTAEVSKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDVVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDSIQNTLKIGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQSDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQRPTIIQDPLDGKCLGEVNGNIEFKDVTFSYPSRPDVMIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIYENILYGKPDATMAEVEAAAAAANAHSFITLLPNGYDTQVGERGLQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYSSLIRFQEMVRNREFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFIRLLKLNGPEWPYSIMGAVGSVLSGFISPTFAIVMSNMIEVFYYRNSSAMERKIKEFVFIYIGIGVYAVVAYLIQHYFFTIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLFTSFIVAFIVEWRVSLLILAAFPLLVLANMAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILSLFRHELRVPQRQSLRRSQTAGVLFGISQLALYASEALVLWYGVHLVSNGGSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESIGSVFSILDRPTRIDPDDPEAETVETLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPLAGKVMIDGKDIRRLNLQSLRLKIGLVQQEPALFAASIFDNIAYGKDGATEAEVIEAARAANVHGFVSGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVVQDGRIVEQGSHNELLSRAEGAYSRLLQLQHQHI 1250
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 36373206 36379527 + CePI673135_09g019420.1 Cec09g1942 212452
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1942 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 328 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1942 1250 CDD ABC_MTABC3_MDL1_MDL2 363 600 - -
Cec09g1942 1250 PANTHER ABC TRANSPORTER B FAMILY 9 621 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Cec09g1942 1250 Gene3D - 361 624 IPR027417 -
Cec09g1942 1250 FunFam ABC transporter B family member 1 26 360 - -
Cec09g1942 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 SUPERFAMILY ABC transporter transmembrane region 673 993 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1942 1250 Gene3D ABC transporter type 1, transmembrane domain 86 982 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec09g1942 1250 FunFam ABC transporter B family member 1 665 974 - -
Cec09g1942 1250 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Cec09g1942 1250 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1244 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Cec09g1942 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1246 IPR027417 -
Cec09g1942 1250 Pfam ABC transporter transmembrane region 39 312 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1942 1250 Pfam ABC transporter transmembrane region 686 956 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1942 1250 FunFam ABC transporter B family member 19 998 1247 - -
Cec09g1942 1250 CDD ABC_MTABC3_MDL1_MDL2 1008 1246 - -
Cec09g1942 1250 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 Gene3D - 998 1250 IPR027417 -
Cec09g1942 1250 FunFam ABC transporter B family member 19 353 601 - -
Cec09g1942 1250 Pfam ABC transporter 383 530 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 600 IPR027417 -
Cec09g1942 1250 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec09g1942 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 973 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec09g1942 1250 SMART AAA_5 1035 1221 IPR003593 GO:0016887(InterPro)
Cec09g1942 1250 SMART AAA_5 390 582 IPR003593 GO:0016887(InterPro)
Cec09g1942 1250 SUPERFAMILY ABC transporter transmembrane region 27 349 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1711 Cec-Chr1:31756665 Cec09g1942 Cec-Chr9:36373206 1.20E-95 dispersed
Cec05g1729 Cec-Chr5:28821032 Cec09g1942 Cec-Chr9:36373206 0.00E+00 dispersed
Cec05g2841 Cec-Chr5:38657075 Cec09g1942 Cec-Chr9:36373206 3.30E-290 dispersed
Cec09g0117 Cec-Chr9:1022878 Cec09g1942 Cec-Chr9:36373206 7.40E-281 dispersed
Cec09g0804 Cec-Chr9:7499568 Cec09g1942 Cec-Chr9:36373206 7.70E-08 dispersed
Cec09g1166 Cec-Chr9:11706055 Cec09g1942 Cec-Chr9:36373206 0.00E+00 dispersed
Cec09g1942 Cec-Chr9:36373206 Cec11g1376 Cec-Chr11:28035401 4.1e-310 dispersed
Cec09g1942 Cec-Chr9:36373206 Cec10g2019 Cec-Chr10:34968895 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1942 K05658 - csv:101212585 2281.14