Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1949 ATGGGTTTGGCACCTAATGATTCCAAGCTCGAGACATGGATTGAGGGGAAGTCAAAAACAGCTAGCGAGAAGAAGAAGAAGAAGGAGAATGAGTTGGAGGAGGAGACTGGATGTTGGGTTAAGTTGAAGTTCATAGGGAGTTGCATTCCTTCTAGATCAAAGGTTGATAGTTCTCTGAGTGGATCAAAGGTCGATAGCTTCATCAGTGGCACCAGTACCCATTGCGATAGTAAACCTAAACTTGACGAAAAAAGAGATATTCTGGTTACTGCATTGGGGTCATCAGCGACAACTGATAATGCTGAAAGTAGTTCGTCCACGCCCAAGCTCAGTGCAGAGCTGAAGGTTGCTTCTCGGCTTCGTAAGTTCACTTTTAATGAGCTTAAGTTAGCCACAAGAAATTTCCGACCTGAGAGCCTTCTTGGCGAGGGAGGTTTTGGTTGTGTTTTCAAAGGATGGATTGAGGAGAATGGAACTGCTCCTGCTAAACCTGGAACTGGGCTTACAGTTGCAGTCAAGACTCTTAATCATGACGGCCTACAAGGTCATAAGGAGTGGATGGCTGAAGTTAACTTCCTCGGTGACCTCAACCATTCTAATCTTGTAAGATTGATTGGTTGCTGCATTGAAGATGATCAAAGGTTATTAGTTTATGAGTTCATGCCTCGTGGAAGTTTGGAGAATCACCTCTTCAGAAGGCCCTTGCCACTTCCTTGGTCTATTAGATTGAAAATTGCGCTTGGTGCTGCTAAAGGCCTTGCTTTTCTTCACGAAGAAGCTGAAAGACCAGTGATATATCGTGATTTTAAAACGTCTAATATTTTATTAGATGCGGACTACAATGCTAAACTCTCAGATTTTGGACTCGCAAAAGATGGTCCGGAGGGTGACAAAACTCATGTTTCAACTCGGGTTATGGGAACCTATGGTTATGCAGCTCCAGAATATGTGATGACTGGGCATTTAACATCAAAAAGCGATGTCTACAGTTTTGGAGTTGTCTTGCTTGAAATGCTAACCGGTCGAAGATCGATGGATAAAAATAGACCGAATGGGGAGCACAACCTTGTTGAATGGGCTAGACCCTTGCTTGGAGACAAGAGGAAGTTCTACCGGCTGATAGATCCTCGCCTTGAATGTCACTTCTCGATCAAAGGTGCACAAAAAGCTGCCGAGCTTGCAGCTCACTGCCTTAGTAGAGATCCTAAAGCCAGACCTATGATGAGTGAAGTTGTTGAAATTTTAAAACCTTTGCCAAACCTCAAGGACATGGCAAGTTCTTCCTATTACTTCCAAACCATGCAAGCAGACCGTGCCAGGTCCAACCCCAATGCTAAAAGTGTCGTCCGGACGCAGTCGATGTTTGTGGCAAGGAATGGGCAACACATTAGAAGCTTATCAAGTCCAAATGGGCCTCATGCTTCTCCATATAATTATCCTCATCAGTCACCGAAACCTGACAGGAGATAA 1470 44.29 MGLAPNDSKLETWIEGKSKTASEKKKKKENELEEETGCWVKLKFIGSCIPSRSKVDSSLSGSKVDSFISGTSTHCDSKPKLDEKRDILVTALGSSATTDNAESSSSTPKLSAELKVASRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPAKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLGDLNHSNLVRLIGCCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPLLGDKRKFYRLIDPRLECHFSIKGAQKAAELAAHCLSRDPKARPMMSEVVEILKPLPNLKDMASSSYYFQTMQADRARSNPNAKSVVRTQSMFVARNGQHIRSLSSPNGPHASPYNYPHQSPKPDRR 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36510395 36514890 - CePI673135_09g019490.1 Cec09g1949 212459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1949 489 Pfam Protein tyrosine and serine/threonine kinase 139 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1949 489 MobiDBLite consensus disorder prediction 12 34 - -
Cec09g1949 489 Gene3D Phosphorylase Kinase; domain 1 110 220 - -
Cec09g1949 489 MobiDBLite consensus disorder prediction 1 34 - -
Cec09g1949 489 FunFam Probable serine/threonine-protein kinase PBL8 221 436 - -
Cec09g1949 489 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524(InterPro)
Cec09g1949 489 PANTHER OS01G0588500 PROTEIN-RELATED 106 419 IPR050823 -
Cec09g1949 489 CDD STKc_IRAK 141 418 - -
Cec09g1949 489 MobiDBLite consensus disorder prediction 463 489 - -
Cec09g1949 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g1949 489 Gene3D Transferase(Phosphotransferase) domain 1 221 438 - -
Cec09g1949 489 MobiDBLite consensus disorder prediction 463 477 - -
Cec09g1949 489 FunFam Serine/threonine-protein kinase BIK1 102 220 - -
Cec09g1949 489 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1949 489 SUPERFAMILY Protein kinase-like (PK-like) 112 415 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1311 Cec-Chr6:26359186 Cec09g1949 Cec-Chr9:36510395 5.70E-140 dispersed
Cec09g1277 Cec-Chr9:14979634 Cec09g1949 Cec-Chr9:36510395 2.50E-90 dispersed
Cec09g1949 Cec-Chr9:36510395 Cec11g0333 Cec-Chr11:3613163 1.40E-141 dispersed
Cec05g2690 Cec-Chr5:37472925 Cec09g1949 Cec-Chr9:36510395 2.10E-201 wgd
Cec08g0922 Cec-Chr8:21060702 Cec09g1949 Cec-Chr9:36510395 1.40E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72279 PF07714 PK_Tyr_Ser-Thr 4.00E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1949 - - - 0.0