Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g1965 ATGTCCAACTTCTTCCTCACATGGGTTTCTCTGAATCATCTTCTTCTTTTTCTTCTTCTACTTTGTGTTTCTCCATCTTTTTCTGTAGTTCCAGAAGACGATATAAGGTGTCTTCGAGGGGTTAAGAATGCGCTTGTTGATCCTCTCGGAAGGCTTAGTTCATGGGATTTCAAGAACACATCCGTTGGTCATCTCTGCAACAAATTCGTTGGTCTCTCCTGCTGGAACGACCGTGAGAATCGCATTCTCAGCCTCGAGCTTAAAGATATGAAGCTCTCCGGTTCAATTTCTGAAGACTTACAGTACTGTGTAAGCCTGCAGAAACTGGATCTGTCCGGTAATAGCTTTTCCGGCTCGATCCCGCCGCATATTTGTGAGTGGCTTCCGTATTTGGTTAGCATGGATTTGTCGAACAATCAATTTACCGGTCCTATTCCGGCTGATCTCGCTAGATGTTCTTATTTGAATTCGTTGATTTTGTCTGATAATGAGCTTTCTGGTACAATACCAGTTGAGCTCACGAGTCTGGGTAGACTTAACAAATTTTCTGTTGCGAACAATCAACTCACTGGTACGATTCCTTCATTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCTAGTTGTGGTGGGTTGAGCAAGAAGAATCTTGCGATTATTATAGCTGCTGGTGTGTTTGGTGCTGCGGCTTCTCTGTTGTTAGGTTTTGGGTTGTGGTGGTGGTATCATTCTAGAATGAACATGAAGAGGAGAAGGGGATATGGGGATGGGATTAGTGGGGATTGGGCCGATAGATTGAGAGCCTATAAGCTTGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAGTTGGCTGATTTGATGGCTGCTACTAATAATTTCAATTCTGAAAACATCATAGTTTCTTCTAGAACTGGGACTACTTATAGAGCTGTTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACTTGCAAGCTCGGTGAGAAGCTGTTTCGAATGGAGATGAACAGGTTAGGATCGATCAGACACCCGAATTTGACACCCCTTTTGGGATTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGGACTTTGTCCTCTTTGTTACATGGAAATGATGAGATATTGGATTGGCCAACTAGGTTTAGGATTGGTCTGGGTGCAGCTAGAGGTCTTGCTTGGCTTCACCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGAAGACTATGATGCTAGGATCATGGATTTTGGATTGGCAAGGTTGATGGCTTCAGATTCTCATGACAGTAGTTTTGTTAATGGAGACTTAGGGGAACTTGGTTACGTTGCTCCTGAGTACCCGAGCACCATGGTTGCATCTTTGAAGGGGGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGATCACTGGCCAAAAACCTCTAGAAGTCACCAAAGCAGAGGAAGGTTATAAGGGTAACTTAGTGGATTGGGTTAATCAGCTGAGTATGTCGGGTCGAATTAAGGATGTTATTGATAAAGATCTTTGTGGGAAAGGGAACGATGAGGAAATCTTACAATTTCTGAAAATTACAATGAACTGCATTGTTTCTCGGCCCAAAGACAGGTGGTCTATGTTTCAGGTTTATCAATCAATGAAAACCATGGCTAAAGACTACAGTTTCCCTGAACCAGATGATGAATTCCCACTTTTACTTGGCAAGGGAGATAATGAACCCATGTAG 1821 42.45 MSNFFLTWVSLNHLLLFLLLLCVSPSFSVVPEDDIRCLRGVKNALVDPLGRLSSWDFKNTSVGHLCNKFVGLSCWNDRENRILSLELKDMKLSGSISEDLQYCVSLQKLDLSGNSFSGSIPPHICEWLPYLVSMDLSNNQFTGPIPADLARCSYLNSLILSDNELSGTIPVELTSLGRLNKFSVANNQLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKRRRGYGDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRLGSIRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLSSLLHGNDEILDWPTRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARIMDFGLARLMASDSHDSSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGVVLLELITGQKPLEVTKAEEGYKGNLVDWVNQLSMSGRIKDVIDKDLCGKGNDEEILQFLKITMNCIVSRPKDRWSMFQVYQSMKTMAKDYSFPEPDDEFPLLLGKGDNEPM 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36703139 36704959 - CePI673135_09g019650.1 Cec09g1965 212475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g1965 606 Gene3D Phosphorylase Kinase; domain 1 267 381 - -
Cec09g1965 606 PANTHER RECEPTOR-LIKE PROTEIN 55 80 577 - -
Cec09g1965 606 Gene3D Transferase(Phosphotransferase) domain 1 382 592 - -
Cec09g1965 606 ProSiteProfiles Protein kinase domain profile. 307 581 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g1965 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 381 - -
Cec09g1965 606 SUPERFAMILY Protein kinase-like (PK-like) 284 577 IPR011009 -
Cec09g1965 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 31 221 - -
Cec09g1965 606 Gene3D Ribonuclease Inhibitor 32 222 IPR032675 -
Cec09g1965 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 382 600 - -
Cec09g1965 606 Pfam Leucine Rich Repeat 105 126 IPR001611 GO:0005515(InterPro)
Cec09g1965 606 Pfam Leucine Rich Repeat 131 152 IPR001611 GO:0005515(InterPro)
Cec09g1965 606 Pfam Leucine Rich Repeat 155 176 IPR001611 GO:0005515(InterPro)
Cec09g1965 606 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Cec09g1965 606 SUPERFAMILY L domain-like 31 202 - -
Cec09g1965 606 Pfam Protein tyrosine and serine/threonine kinase 331 514 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0775 Cec-Chr9:7097056 Cec09g1965 Cec-Chr9:36703139 1.10E-115 dispersed
Cec09g1965 Cec-Chr9:36703139 Cec09g0355 Cec-Chr9:2971279 5.10E-64 dispersed
Cec09g1965 Cec-Chr9:36703139 Cec05g0956 Cec-Chr5:8355589 1.50E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72280 PF07714 PK_Tyr_Ser-Thr 2.00E-29 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g1965 - - - 0.0