Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2001 ATGGATACAAGCTTGTTCAGGGGTCATCCTGAAAAGAGAGATTCATGGAGGACAATCTTCACTTTAGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTTTGTATGTGTATAAAAGCACTTTTGCAGAGAACCTTCAGCACTCTGAGACTAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTTATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCATTGCTCTGTCGCCATGCTCGGTTGAGCTCTCTCCCAAATCACCAACTAGCGGATGAGGAGCTTTCTGCATATACAATTGACAGCCCACAAACTGAAAACACTACTAATTTTAGTTTTAGTTCTTGTCTGAAATCAACTTTGGAGAAATGTAAAGTTCTGCACAAAATGTTGCTTGTTCTTGCTTTGATTGGGACTTGCATGGTTATTGGAGATGGTGTTCTCACACCAGCAATCTCAGTTTTTTCAGCTGTTTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTAGCGTGTGGCATTTTGGTATTCTTATTCGCATTGCAACACTATGGAACGCATCAGGTTGGGTTCCTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATTAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCCTGGTTTACAAAGCACTCTCGCCATACTACATGTATAAGTTCTTAAAAAAAACCAAAAAGCAAGGTTGGATGGCACTCGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGGCACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACGATCTTGATAATGAATATCGGATTGGATTCTATGTTTCTGTTCCCGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGTAGTCAAGCAATCATCACCGGCACATTTTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTTCCAAGGGTAAAGATCATTCATACGTCTTCGAAAATACACGGCCAGATTTACATTCCCTTGATCAACTGGATACTAATGATATTGTGTTTGGCTGTTACCATTGGGTTTAGAGACACAAAACGACTAGGCAATGCAGCAGGGTTGGCGGTTATTACTGTCATGCTCGTCTCGACATGTCTAATGTCACTTGTCATTGTATTATGTTGGCGTAAAAGTGTGTTGCTGGCCATAGCCTTCATACTCTTCTTTGGCTCCGTAGAAGCTCTCTACTTCTCTGCTTCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGTTCTTTCATTGACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGCACAGTGAAGAAATATGAAGCTGATGTTGAAAACAAAGTCCCCATACATTGGCTCCTCAGTATAGGACCCAAAATTGGGATCGTTCGAGTCCGGGGGATCGGCCTTGTACATACTGAACTCGTTTCGGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCATCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAGTGCCTCATGTGAGGCCTGAGGAAAGGTTTTTAGTTGGACGAGTTGGGCCAAAGGAGTATCGACTCTACCGTTGCATCGCACGGTATGGCTATCGTGACATGCACAAGGACGACTTGGAGTTCGAGAGAGATCTTGGTTGCAGCATTGCAGAATTCATACGGTCCGAGAGAACAGAATGCAACAATTTTAGACACGAAGACTTGGAGGACAATGAAAGAATGACAGTGATTGGGACTTCATCAACCCAACTAGAGGGTATACAAATGTGTGAAAACGAAACATATGCTTCCCCAATCATGGGAACTTCAGAGATAATAAAGTCGGAGCAGTTGAGAAAAAGAGTTCGATTCGTTCTCCCCGAGAGTCCGAAAATGAACATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAGGCAAGGGAGGCAGGCATAGCATTTATAATGGGGCATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGATATGATTTCTTGAGGAAAAATTCAAGAGGGCCATCTTATGCTTTCAGCATTCCTTATGCTTCTACTCTTGAGCGGAGGGAGCGTGAAGGGGGGGTTTGGAAGTCCATGTATCACTCAGTACCGCTCAATATCGCTCTCGCAGGTAAGGAGTATGGTGGCTCGGCGCATGGCCGAGGAAATCCATGA 2415 43.02 MDTSLFRGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTIDSPQTENTTNFSFSSCLKSTLEKCKVLHKMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHDLDNEYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFILFFGSVEALYFSASLIKFFEGAWVPIVLSLTFLVVMYVWHYGTVKKYEADVENKVPIHWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDMHKDDLEFERDLGCSIAEFIRSERTECNNFRHEDLEDNERMTVIGTSSTQLEGIQMCENETYASPIMGTSEIIKSEQLRKRVRFVLPESPKMNIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYAFSIPYASTLERREREGGVWKSMYHSVPLNIALAGKEYGGSAHGRGNP 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37017380 37023532 - CePI673135_09g020010.1 Cec09g2001 212511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2001 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 767 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec09g2001 804 Pfam K+ potassium transporter C-terminal domain 534 767 IPR053952 -
Cec09g2001 804 NCBIfam potassium uptake protein 22 766 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec09g2001 804 Pfam K+ potassium transporter integral membrane domain 22 521 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2748 Cec-Chr5:37965163 Cec09g2001 Cec-Chr9:37017380 1.6e-312 dispersed
Cec07g0559 Cec-Chr7:6804319 Cec09g2001 Cec-Chr9:37017380 3.30E-281 dispersed
Cec09g2001 Cec-Chr9:37017380 Cec11g0040 Cec-Chr11:543709 1.80E-186 dispersed
Cec05g1406 Cec-Chr5:15896246 Cec09g2001 Cec-Chr9:37017380 4.00E-249 transposed
Cec10g1456 Cec-Chr10:28900416 Cec09g2001 Cec-Chr9:37017380 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2001 K03549 - csv:101218141 1481.46