Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2007 ATGTTCCCTCTTAACAACTTAGAACCAAAGGAAGAACAGGGTTTTAATATTCACCTCTCAAACTCCATTTCCAACCTTCAAAAATCAAGTGGGCATTCGCGGTTCGAGAGAACCCGGAGCGACCATTATAAATACTCTTCTCTTTTCTCACTATTTCGCAGTAGATTCAGTTTGGACTTAGCAACGTATAATATGGATCACCCATCTGAAACTTTAAGGCACAAATGTGCAGGTTGTTTCAGGCAGTTCAACAAAATAGAGCACTTAGTAGAGCATATGAGAATCTCATTTCACTCATTTCATGAACCCACTTGCTCCCTTTGCCACAAACATTGCAGATCCTTTGAATCTCTTAGAGAACATCTTATTGGGCCACTGCCAAAGCAAGATTGCAACAACATATTCAATACAAGAGGATGCAAAATCTGCTTAGCCATCTTTGAGAGTCCACTCAAGCTAAGGGCTCACCATGAAAGATGTCAACTTAGGCCTGTAAATTCCAGGGAAATTATGGGGCGTTTTGGGAACTTGGGAAATTGTGACAAATTGATGACGATGGAAAATGGGGGCACAAAGAGGTATGAAAATGAAGCAGTGGCATTGAGTTGCACAATGGTGGGCGCTGGCAGCGACGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTCTACTTATGTTCAGCCAACCCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACCAGTGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTTACACGTTTGCACATTGACTATCCTACTTTCATGATAAGGGACACAGCTAAATATCCACCATTGATGAAAACAAGCAAGCTCAGCAATTCTCTCCAATATCTGACACAGACATACCTTGGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAAGAGTGTGTTGCCACAATGAGATTGTACATGAGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCATTGGCTTCTGATCCACAAAATAAACATAACTTTGCAATTTGGAAGCAATTTGAGCTTGAGAAGATGAGCCCACAACAAATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA 1269 41.37 MFPLNNLEPKEEQGFNIHLSNSISNLQKSSGHSRFERTRSDHYKYSSLFSLFRSRFSLDLATYNMDHPSETLRHKCAGCFRQFNKIEHLVEHMRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNCDKLMTMENGGTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPVWKIRPGATGKARILVGHGVEEDLTRLHIDYPTFMIRDTAKYPPLMKTSKLSNSLQYLTQTYLGYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAIWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS 422
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 37090607 37094757 - CePI673135_09g020070.1 Cec09g2007 212517
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2007 422 SMART exoiiiendus 197 372 IPR013520 -
Cec09g2007 422 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 103 IPR013087 -
Cec09g2007 422 SUPERFAMILY Ribonuclease H-like 199 370 IPR012337 -
Cec09g2007 422 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 73 418 IPR047021 GO:0004527(PANTHER)|GO:0004527(InterPro)|GO:0005634(PANTHER)
Cec09g2007 422 Gene3D - 194 385 IPR036397 GO:0003676(InterPro)
Cec09g2007 422 ProSitePatterns Zinc finger C2H2 type domain signature. 76 98 IPR013087 -
Cec09g2007 422 CDD REX4_like 199 363 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0425 Cec-Chr4:16289077 Cec09g2007 Cec-Chr9:37090607 4.80E-78 dispersed
Cec09g2007 Cec-Chr9:37090607 Cec09g2008 Cec-Chr9:37111546 1.10E-134 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2007 - - - 0.0