Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g2008 ATGGATCATTCACTCGAGACGTCGAGGCACAAGTGTGCAGCTTGTTTCAGACAATTCAACAAGATAGAGCATTTGGTAGATCATATGAGGACTTCTTTTCACTCACATCATGAACCCACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAAAAACATATTTGCTACACGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTCTCGGCTGTAAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCGACTGTCATCGATAGCGGAAGAACTCGAAGCTCGGGTGCCGTGGCGTTAGCTTGCAAATATGTAGGTGGGGGCAGCGATGGGTCGCTGGACATATGCGCCAAGGTTTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCCATAATTCCTGTCACAAATTATAGGTATGAAACGGTGGGAATTCGTCCAGAACAAATTCGAGATGCAATGCCACTGAAGCAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCACTTTGTCGAAGATGATCTCAAACGTCTACAAATCGGATACCCATCCGTCATGATAAGGGACACAGCAAATTATCCGCCATTGATGAAGACGAGCAAGCTTTGCAATTCACTCAAATATCTAGCTCAAGTGTATCTAGGATTTGAGCTACAAAATGGGATACAAGATCCTTATGAAGAATGTATTGTGGCCATGAGATTGTACAAGAGAATGAGATCACAAGTTCATAGGATAGAGAAACATCCAATGGCTTCTGACCCACAAAACAAAAATAACTTTGCTAATTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGACTCGAGGATTTGA 1035 42.51 MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSAVNSGLLARFANLGIRDGSTVIDSGRTRSSGAVALACKYVGGGSDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETVGIRPEQIRDAMPLKQVQKKIQDILYNGGEKARILVGHFVEDDLKRLQIGYPSVMIRDTANYPPLMKTSKLCNSLKYLAQVYLGFELQNGIQDPYEECIVAMRLYKRMRSQVHRIEKHPMASDPQNKNNFANWRENELQRMSPEQMLEISRSDYYCWCMDSRI 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37111546 37115401 - CePI673135_09g020080.1 Cec09g2008 212518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g2008 344 ProSitePatterns Zinc finger C2H2 type domain signature. 12 34 IPR013087 -
Cec09g2008 344 SMART exoiiiendus 130 295 IPR013520 -
Cec09g2008 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 10 39 IPR013087 -
Cec09g2008 344 CDD REX4_like 132 287 IPR037431 GO:0006364(InterPro)|GO:0008408(InterPro)
Cec09g2008 344 Gene3D - 127 309 IPR036397 GO:0003676(InterPro)
Cec09g2008 344 SUPERFAMILY Ribonuclease H-like 145 292 IPR012337 -
Cec09g2008 344 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 342 IPR047021 GO:0004527(PANTHER)|GO:0004527(InterPro)|GO:0005634(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g2007 Cec-Chr9:37090607 Cec09g2008 Cec-Chr9:37111546 1.10E-134 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g2008 - - - 0.0